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KR131711.1__AKC57582.1__HMPREF1994_00023__00023
Bact-VirKR131711.1__AKC57582.1__HMPREF1994_00023__00023
Identity
- Accession:
- KR131711 ↗
- Kingdom:
- phage
Quality
79.7
mean pLDDT
Cluster
View cluster (247 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 14-107
Domain cluster:
rep: NC_073317.1__YP_010749072.1__QCF72_gp16__00016__D4-119
CATH (47)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2pp6A02 | 2.40.10.210 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Phage tail proteins (gpFII-like) | 0.81 | 52.0 | 6.36e-01 | 98.9% | 98.4% |
| 2j5uA02 | 2.40.10.340 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Rod shape-determining protein MreC, domain 1 | 0.75 | 48.0 | 5.09e-01 | 80.9% | 72.6% |
| 6zlvA01 | 2.40.10.350 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Rod shape-determining protein MreC, domain 2 | 0.74 | 57.0 | 6.24e-01 | 100.0% | 98.7% |
| 3cpfA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.72 | 34.0 | 4.02e-01 | 96.8% | 64.6% |
| 3gs9A01 | 6.20.110.10 | Special › Other non-globular › Thrombin, subunit H › | 0.72 | 57.0 | 6.20e-01 | 98.9% | 100.0% |
| 6toaE01 | 2.40.10.270 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Bacteriophage SPP1 head-tail adaptor protein | 0.69 | 62.0 | 6.14e-01 | 96.8% | 100.0% |
| 3f3bA00 | 2.40.10.370 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Protein of unknown function DUF3599 | 0.68 | 63.0 | 5.89e-01 | 100.0% | 92.2% |
| 3kyfA02 | 2.40.10.220 | Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains | 0.67 | 54.0 | 5.04e-01 | 100.0% | 69.2% |
| 1yy3A02 | 2.40.10.240 | Mainly Beta › Beta Barrel › Thrombin, subunit H › QueA-like | 0.67 | 46.0 | 4.60e-01 | 100.0% | 67.7% |
| 3k6yA01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.67 | 47.0 | 4.83e-01 | 100.0% | 75.0% |
| 2o8lA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.67 | 54.0 | 5.30e-01 | 100.0% | 80.2% |
| 2kcaA00 | 2.40.10.270 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Bacteriophage SPP1 head-tail adaptor protein | 0.66 | 58.0 | 5.60e-01 | 100.0% | 89.0% |
| 2ra1A04 | 2.60.40.1220 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.63 | 40.0 | 4.05e-01 | 75.5% | 62.9% |
| 1khiA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.62 | 31.0 | 3.40e-01 | 97.9% | 57.3% |
| 3c1mA02 | 3.30.2130.10 | Alpha Beta › 2-Layer Sandwich › VC0802-like › VC0802-like | 0.62 | 44.0 | 3.70e-01 | 74.5% | 86.0% |
| 3nfwA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.62 | 56.0 | 4.50e-01 | 100.0% | 65.4% |
| 3fgeA01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.61 | 55.0 | 4.53e-01 | 100.0% | 73.8% |
| 2q9kA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.61 | 53.0 | 4.62e-01 | 100.0% | 61.9% |
| 1rz1A00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.61 | 55.0 | 4.70e-01 | 100.0% | 75.7% |
| 3rgfA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.61 | 42.0 | 4.23e-01 | 72.3% | 69.8% |
| 3pftA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.61 | 55.0 | 4.64e-01 | 100.0% | 76.3% |
| 1wruA01 | 2.30.300.10 | Mainly Beta › Roll › Phage tail proteins - horseshoe like beta roll fold › Baseplate protein-like domain - beta roll fold | 0.61 | 50.0 | 4.11e-01 | 100.0% | 48.6% |
| 4bfoA00 | 2.60.40.2440 | Mainly Beta › Sandwich › Immunoglobulin-like › Carbohydrate binding type-21 domain | 0.60 | 42.0 | 4.06e-01 | 74.5% | 64.2% |
| 2xzmP00 | 3.30.70.3370 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.60 | 43.0 | 3.73e-01 | 75.5% | 48.6% |
| 3tviA02 | 3.30.2130.10 | Alpha Beta › 2-Layer Sandwich › VC0802-like › VC0802-like | 0.59 | 42.0 | 3.56e-01 | 74.5% | 84.9% |
| 5xyiY00 | 3.30.70.3370 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.58 | 41.0 | 4.00e-01 | 73.4% | 65.7% |
| 3dnhA01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.58 | 52.0 | 4.44e-01 | 100.0% | 75.5% |
| 2vpaA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.58 | 52.0 | 4.04e-01 | 100.0% | 64.7% |
| 4p02A03 | 2.40.10.220 | Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains | 0.57 | 47.0 | 4.34e-01 | 100.0% | 68.9% |
| 1vq8B02 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.57 | 42.0 | 3.69e-01 | 76.6% | 72.3% |
| 5jv4A00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.57 | 51.0 | 4.46e-01 | 100.0% | 84.5% |
| 1hpgA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.57 | 44.0 | 4.35e-01 | 100.0% | 77.8% |
| 3szeA01 | 2.40.10.120 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.56 | 50.0 | 3.51e-01 | 100.0% | 33.1% |
| 1n08A00 | 2.40.30.30 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Riboflavin kinase-like | 0.56 | 46.0 | 3.98e-01 | 91.5% | 56.5% |
| 6mv2A01 | 2.60.40.790 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.55 | 39.0 | 3.83e-01 | 73.4% | 76.5% |
| 1wxrA01 | 2.40.10.120 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.55 | 49.0 | 3.59e-01 | 100.0% | 42.0% |
| 2olgA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.53 | 47.0 | 4.47e-01 | 100.0% | 87.8% |
| 1ejfA00 | 2.60.40.790 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.53 | 39.0 | 3.72e-01 | 76.6% | 70.9% |
| 3h7oB01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.53 | 45.0 | 4.33e-01 | 100.0% | 80.5% |
| 3cp7B02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.53 | 42.0 | 4.09e-01 | 100.0% | 77.1% |
| 2v9kA04 | 3.30.70.3190 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.52 | 43.0 | 4.14e-01 | 92.6% | 78.0% |
| 3urgA02 | 2.30.30.530 | Mainly Beta › Roll › SH3 type barrels. › Calcium binding protein CcbP, beta-barrel domain | 0.52 | 32.0 | 3.72e-01 | 74.5% | 90.5% |
| 3h7tB01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.52 | 46.0 | 4.23e-01 | 100.0% | 77.9% |
| 7mjrA04 | 2.60.40.1790 | Mainly Beta › Sandwich › Immunoglobulin-like › Fungal immunomodulatory protein Fve | 0.52 | 33.0 | 3.35e-01 | 77.7% | 65.2% |
| 1v05A00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 34.0 | 3.45e-01 | 76.6% | 66.7% |
| 1hxmB02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 36.0 | 3.50e-01 | 74.5% | 64.8% |
| 2gukA00 | 3.30.2190.10 | Alpha Beta › 2-Layer Sandwich › PG1857-like › PG1857-like | 0.51 | 35.0 | 3.31e-01 | 100.0% | 58.6% |
ECOD (44)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5003311 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.80 | 74.0 | 7.03e-01 | 100.0% | 97.3% |
| 4669352 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.78 | 73.0 | 6.88e-01 | 100.0% | 84.5% |
| 3058418 | 1.1.13.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_attach | 0.77 | 64.0 | 6.22e-01 | 100.0% | 81.4% |
| 3975275 | 1.1.13.15 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Gifsy-2 | 0.76 | 55.0 | 5.53e-01 | 100.0% | 74.7% |
| 3963092 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.75 | 55.0 | 5.49e-01 | 100.0% | 74.7% |
| 4405204 | 1.1.12.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › barrel domain in QueA-like proteins › Queuosine_synth | 0.75 | 50.0 | 5.41e-01 | 100.0% | 81.2% |
| 185291 | 1.1.13.20 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Prophage_tailD1 | 0.72 | 58.0 | 6.28e-01 | 100.0% | 100.0% |
| 2642578 | 1.1.13.3 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_H_T_join | 0.70 | 65.0 | 6.19e-01 | 100.0% | 91.8% |
| 4954563 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.70 | 59.0 | 6.22e-01 | 98.9% | 98.8% |
| 3943285 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.70 | 65.0 | 6.17e-01 | 100.0% | 97.2% |
| 4883825 | 1.1.13.20 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Prophage_tailD1 | 0.69 | 61.0 | 6.21e-01 | 100.0% | 95.7% |
| 4031786 | 1.1.13.20 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Prophage_tailD1 | 0.69 | 59.0 | 6.22e-01 | 96.8% | 100.0% |
| 4034130 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.69 | 63.0 | 6.21e-01 | 100.0% | 94.0% |
| 4032883 | 1.1.13.3 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_H_T_join | 0.69 | 63.0 | 6.12e-01 | 100.0% | 95.2% |
| 3265288 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.69 | 43.0 | 4.22e-01 | 76.6% | 57.1% |
| 169594 | 1.1.13.14 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › DUF3599 | 0.68 | 63.0 | 5.89e-01 | 100.0% | 92.2% |
| 3261759 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.67 | 43.0 | 4.53e-01 | 75.5% | 71.8% |
| 2137681 | 1.1.5.25 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ | 0.66 | 52.0 | 4.91e-01 | 100.0% | 70.6% |
| 3428387 | 1.1.17.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 | 0.66 | 53.0 | 4.28e-01 | 100.0% | 45.0% |
| 119197 | 1.1.13.3 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_H_T_join | 0.66 | 58.0 | 5.60e-01 | 100.0% | 89.0% |
| 4028981 | 1.1.5.33 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 | 0.65 | 54.0 | 4.09e-01 | 100.0% | 38.2% |
| 3588729 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.65 | 60.0 | 5.99e-01 | 96.8% | 100.0% |
| 3587815 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.65 | 58.0 | 5.61e-01 | 100.0% | 94.3% |
| 3171972 | 1.1.5.8 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Putative_PNPOx | 0.65 | 58.0 | 4.74e-01 | 100.0% | 79.2% |
| 4260208 | 1.1.13.62 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › PF27197 | 0.62 | 55.0 | 5.33e-01 | 96.8% | 100.0% |
| 3709965 | 1.1.7.9 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › tRNA-synt_2c | 0.62 | 46.0 | 4.41e-01 | 79.8% | 76.4% |
| 3905151 | 11.1.1.96 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C1-set | 0.59 | 39.0 | 3.57e-01 | 75.5% | 49.2% |
| 3752007 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.58 | 50.0 | 3.78e-01 | 96.8% | 84.7% |
| 3268578 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.57 | 42.0 | 4.03e-01 | 77.7% | 67.3% |
| 3058416 | 1.1.5.39 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › TssD | 0.57 | 53.0 | 4.74e-01 | 100.0% | 85.0% |
| 3991786 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.56 | 50.0 | 3.55e-01 | 100.0% | 37.2% |
| 3520919 | 4004.1.1.6 ↗ | beta sandwiches › NAD kinase beta sandwich domain-like › NAD kinase beta sandwich domain-like › NAD kinase beta sandwich domain-like › Pacs-1 | 0.55 | 35.0 | 3.11e-01 | 100.0% | 43.4% |
| 3795449 | 319.1.1.0 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones | 0.54 | 38.0 | 3.62e-01 | 75.5% | 67.8% |
| 3416144 | 1.1.17.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 | 0.53 | 46.0 | 3.65e-01 | 98.9% | 87.6% |
| 3813872 | 5.1.4.550 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Kelch_FKB95 | 0.53 | 38.0 | 2.71e-01 | 74.5% | 99.3% |
| 3600494 | 77.2.1.0 ↗ | beta meanders › open-sided beta-meander › Histone H3 K4-specific methyltransferase SET7/9-N › Histone H3 K4-specific methyltransferase SET7/9-N | 0.53 | 27.0 | 2.75e-01 | 100.0% | 46.3% |
| 2060704 | 1.1.5.13 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Peptidase_S6 | 0.53 | 45.0 | 3.39e-01 | 98.9% | 78.6% |
| 3517335 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.52 | 32.0 | 3.07e-01 | 100.0% | 49.6% |
| 3806797 | 220.1.1.171 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › DUF7135 | 0.51 | 37.0 | 3.15e-01 | 76.6% | 63.6% |
| 3922317 | 11.2.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain | 0.51 | 42.0 | 3.38e-01 | 89.4% | 81.6% |
| 4374003 | 310.3.1.0 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › General secretion pathway protein M (EpsM) periplasmic domain-related › General secretion pathway protein M (EpsM) periplasmic domain-related | 0.51 | 40.0 | 4.04e-01 | 98.9% | 84.7% |
| 3940060 | 4004.1.1.6 ↗ | beta sandwiches › NAD kinase beta sandwich domain-like › NAD kinase beta sandwich domain-like › NAD kinase beta sandwich domain-like › Pacs-1 | 0.51 | 37.0 | 3.09e-01 | 75.5% | 89.4% |
| 4017098 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.50 | 39.0 | 3.73e-01 | 86.2% | 70.9% |
| 5031423 | 212.1.1.0 ↗ | a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like | 0.50 | 37.0 | 3.29e-01 | 76.6% | 73.3% |