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KR131711.1__AKC57583.1__HMPREF1994_00024__00024
Bact-VirKR131711.1__AKC57583.1__HMPREF1994_00024__00024
Identity
- Accession:
- KR131711 ↗
- Kingdom:
- phage
Quality
90.2
mean pLDDT
Cluster
View cluster (17 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 30-161
Domain cluster:
rep: IMGVR_UViG_3300020813_000093-3300020813-Ga0214086_15396894__D10-175
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1xdxA01 | 3.30.1140.40 | Alpha Beta › 2-Layer Sandwich › Ribosomal protein S3 C-terminal domain › Tctex-1 | 0.73 | 34.0 | 3.90e-01 | 81.1% | 58.0% |
| 3nrhA00 | 1.20.120.1550 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Protein of unknown function DUF5063 | 0.60 | 40.0 | 3.82e-01 | 91.7% | 57.0% |
| 2om6A02 | 1.10.150.400 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › | 0.58 | 29.0 | 3.53e-01 | 78.8% | 74.7% |
| 3jrqA00 | 3.60.40.10 | Alpha Beta › 4-Layer Sandwich › Phosphatase 2c; domain 1 › PPM-type phosphatase domain | 0.57 | 43.0 | 3.39e-01 | 78.8% | 69.0% |
| 3vkgA08 | 1.10.472.130 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Dynein motor, AAA2 domain, small subdomain | 0.55 | 41.0 | 3.93e-01 | 97.7% | 65.6% |
| 3rkgA02 | 1.20.58.340 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Magnesium transport protein CorA, transmembrane region | 0.54 | 37.0 | 3.49e-01 | 70.5% | 67.7% |
| 1txuA01 | 1.10.246.120 | Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › | 0.54 | 35.0 | 4.01e-01 | 94.7% | 90.4% |
| 3ltoA02 | 3.30.70.890 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › GHMP kinase, C-terminal domain | 0.53 | 42.0 | 4.21e-01 | 94.7% | 83.6% |
| 3onjA00 | 1.20.58.400 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › t-snare proteins | 0.50 | 33.0 | 3.84e-01 | 78.8% | 91.8% |
ECOD (8)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4937043 | 7516.1.1.2 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glycos_transf_2 | 0.61 | 40.0 | 2.95e-01 | 78.0% | 24.8% |
| 5054557 | 604.3.1.0 ↗ | alpha bundles › Spectrin repeat-like › BAG domain › BAG domain | 0.59 | 39.0 | 4.43e-01 | 88.6% | 96.7% |
| 3973730 | 101.1.2.669 ↗ | alpha arrays › HTH › HTH › winged helix domain › Bac_GDH_CD | 0.56 | 41.0 | 3.23e-01 | 75.8% | 95.6% |
| 3666876 | 5058.1.1.0 ↗ | alpha bundles › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region | 0.56 | 40.0 | 4.06e-01 | 73.5% | 81.5% |
| 3959456 | 5067.1.1.4 ↗ | alpha bundles › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › MMPL | 0.56 | 44.0 | 3.16e-01 | 82.6% | 48.3% |
| 1117697 | 148.1.3.16 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › Dynein_AAA_lid | 0.55 | 41.0 | 3.75e-01 | 97.7% | 57.4% |
| 3606800 | 1075.5.1.0 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Multidrug and toxic compound extrusion (MATE) transporter › Multidrug and toxic compound extrusion (MATE) transporter | 0.51 | 42.0 | 3.55e-01 | 90.2% | 77.8% |
| 4048408 | 1075.5.1.0 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Multidrug and toxic compound extrusion (MATE) transporter › Multidrug and toxic compound extrusion (MATE) transporter | 0.51 | 43.0 | 3.86e-01 | 92.4% | 80.0% |