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KR131711.1__AKC57588.1__HMPREF1994_00029__00029
Bact-VirKR131711.1__AKC57588.1__HMPREF1994_00029__00029
Identity
- Accession:
- KR131711 ↗
- Kingdom:
- phage
Quality
68.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-25_102-142
Domain cluster:
representative
D2
medium
residues 26-78_279-289
D3
medium
residues 143-248
Domain cluster:
representative
CATH (15)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2xe4A02 | 2.130.10.120 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Prolyl oligopeptidase, N-terminal domain | 0.59 | 42.0 | 2.95e-01 | 73.6% | 36.9% |
| 1epaA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.59 | 42.0 | 3.66e-01 | 73.6% | 49.4% |
| 1lf7A00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.58 | 43.0 | 3.74e-01 | 78.3% | 87.2% |
| 2qziA00 | 3.40.1720.10 | Alpha Beta › 3-Layer(aba) Sandwich › Streptococcus thermophilus LMG 18311 protein like › Streptococcus thermophilus LMG 18311 protein like | 0.56 | 42.0 | 4.37e-01 | 80.2% | 95.0% |
| 3gp6A00 | 2.40.160.20 | Mainly Beta › Beta Barrel › Porin › | 0.56 | 38.0 | 3.42e-01 | 70.8% | 60.0% |
| 7ne4A01 | 2.130.10.120 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Prolyl oligopeptidase, N-terminal domain | 0.55 | 39.0 | 2.77e-01 | 72.6% | 36.8% |
| 7bwcA01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.55 | 43.0 | 3.10e-01 | 85.8% | 79.3% |
| 2b1xB00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.53 | 37.0 | 3.24e-01 | 73.6% | 85.6% |
| 3s8zA02 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.53 | 38.0 | 2.76e-01 | 76.4% | 50.6% |
| 4r8oA00 | 2.40.128.720 | Mainly Beta › Beta Barrel › Lipocalin › | 0.52 | 40.0 | 4.21e-01 | 82.1% | 96.9% |
| 3ei3A02 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.52 | 43.0 | 3.05e-01 | 90.6% | 85.7% |
| 2aq5A01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.51 | 43.0 | 3.05e-01 | 92.5% | 81.2% |
| 3hfqA00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.51 | 41.0 | 3.02e-01 | 92.5% | 92.6% |
| 3mswA00 | 2.40.128.720 | Mainly Beta › Beta Barrel › Lipocalin › | 0.50 | 38.0 | 3.49e-01 | 79.2% | 85.6% |
| 2giaB00 | 2.30.31.40 | Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › | 0.50 | 36.0 | 3.29e-01 | 76.4% | 89.0% |
ECOD (22)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5081122 | 4056.1.1.0 ↗ | beta barrels › Barrel domain in upper collar protein › Barrel domain in upper collar protein › Barrel domain in upper collar protein | 0.68 | 54.0 | 5.57e-01 | 100.0% | 90.0% |
| 3474457 | 319.1.1.0 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones | 0.66 | 40.0 | 4.19e-01 | 86.8% | 66.3% |
| 3666734 | 5.3.1.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-Prism II › beta-Prism II | 0.65 | 42.0 | 3.96e-01 | 84.0% | 54.6% |
| 3212893 | 5.1.3.57 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › IKI3 | 0.58 | 45.0 | 3.14e-01 | 82.1% | 95.3% |
| 4479826 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.58 | 47.0 | 3.30e-01 | 86.8% | 74.3% |
| 3418966 | 5.1.4.32 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Nucleoporin_N | 0.58 | 44.0 | 2.89e-01 | 82.1% | 85.6% |
| 3923688 | 5.1.4.116 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › IKI3 | 0.57 | 43.0 | 2.93e-01 | 81.1% | 85.7% |
| 3575356 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.56 | 47.0 | 3.34e-01 | 90.6% | 76.2% |
| 3265841 | 216.1.1.20 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like › UBC_like | 0.56 | 33.0 | 3.40e-01 | 75.5% | 61.0% |
| 4030034 | 109.4.1.1140 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_PEP5_VPS11 | 0.56 | 39.0 | 2.51e-01 | 82.1% | 15.6% |
| 3588533 | 868.1.1.1 ↗ | a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › CYTH | 0.55 | 39.0 | 3.25e-01 | 73.6% | 79.5% |
| 3388479 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.55 | 45.0 | 3.12e-01 | 89.6% | 67.0% |
| 3596859 | 5.1.5.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed | 0.55 | 46.0 | 3.03e-01 | 90.6% | 92.8% |
| 3419526 | 5.1.5.146 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › Beta-prop_AT5G49610-like | 0.53 | 43.0 | 3.01e-01 | 86.8% | 48.2% |
| 3485757 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.52 | 44.0 | 2.85e-01 | 93.4% | 79.4% |
| 3454685 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.52 | 42.0 | 2.96e-01 | 88.7% | 83.4% |
| 3593907 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.51 | 41.0 | 3.04e-01 | 86.8% | 74.5% |
| 3743439 | 897.1.1.1 ↗ | a+b two layers › Acidic mitochondrial matrix protein p32-like › Acidic mitochondrial matrix protein p32 › Acidic mitochondrial matrix protein p32 › MAM33 | 0.51 | 44.0 | 3.73e-01 | 97.2% | 82.2% |
| 2658868 | 265.1.1.1 ↗ | a+b two layers › RNA bacteriophage capsid protein › RNA bacteriophage capsid protein › RNA bacteriophage capsid protein › Levi_coat | 0.51 | 41.0 | 3.76e-01 | 84.0% | 73.9% |
| 3963711 | 7579.1.1.0 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases | 0.51 | 46.0 | 2.82e-01 | 100.0% | 67.1% |
| 3510696 | 5.1.4.149 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WDR54 | 0.51 | 40.0 | 3.23e-01 | 86.8% | 92.0% |
| 3932184 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.50 | 39.0 | 2.89e-01 | 84.0% | 93.9% |
D4
medium
residues 396-502