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KR153145.1__AKI28596.1__APCM01_035__00035
Bact-VirKR153145.1__AKI28596.1__APCM01_035__00035
Identity
- Accession:
- KR153145 ↗
- Kingdom:
- phage
Quality
75.1
mean pLDDT
Taxonomy
TaxID: 1647391
Cluster
View cluster (3 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 90-225
Domain cluster:
rep: NC_048679.1__YP_009835541.1__HWB34_gp66__00066__D10-20_37-122
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF05866.17 best | RusA | 102.8 | 2.70e-29 | 96.3% | 98.4% |
CATH (15)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1q8rA00 | 3.30.1330.70 | Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Holliday junction resolvase RusA | 0.83 | 66.0 | 7.08e-01 | 100.0% | 94.9% |
| 2r75102 | 3.30.1330.20 | Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Tubulin/FtsZ, C-terminal domain | 0.67 | 44.0 | 4.86e-01 | 100.0% | 82.7% |
| 1w5eB02 | 3.30.1330.20 | Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Tubulin/FtsZ, C-terminal domain | 0.67 | 43.0 | 4.85e-01 | 100.0% | 84.0% |
| 1w5fA02 | 3.30.1330.20 | Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Tubulin/FtsZ, C-terminal domain | 0.65 | 43.0 | 4.51e-01 | 100.0% | 74.2% |
| 5l16A01 | 3.30.1330.10 | Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › PurM-like, N-terminal domain | 0.63 | 42.0 | 4.45e-01 | 100.0% | 75.6% |
| 2ozpA02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.62 | 43.0 | 4.06e-01 | 96.3% | 58.7% |
| 2zovA00 | 3.30.1330.60 | Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › OmpA-like domain | 0.60 | 46.0 | 4.31e-01 | 100.0% | 65.7% |
| 3cb2A02 | 3.30.1330.20 | Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Tubulin/FtsZ, C-terminal domain | 0.60 | 42.0 | 4.77e-01 | 100.0% | 99.0% |
| 1vk3A03 | 3.30.1330.10 | Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › PurM-like, N-terminal domain | 0.58 | 40.0 | 3.95e-01 | 100.0% | 65.3% |
| 6aeoB01 | 3.30.1330.60 | Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › OmpA-like domain | 0.56 | 44.0 | 4.48e-01 | 99.3% | 85.2% |
| 2hjsA02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.55 | 45.0 | 4.12e-01 | 96.3% | 65.8% |
| 1tvkA02 | 3.30.1330.20 | Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Tubulin/FtsZ, C-terminal domain | 0.55 | 43.0 | 4.61e-01 | 100.0% | 97.4% |
| 1ygyB03 | 3.30.1330.90 | Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › D-3-phosphoglycerate dehydrogenase; domain 3 | 0.54 | 40.0 | 4.03e-01 | 92.6% | 75.5% |
| 5trdA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.53 | 26.0 | 3.17e-01 | 75.0% | 72.6% |
| 2iu4A02 | 3.30.1180.20 | Alpha Beta › 2-Layer Sandwich › Hypothetical Protein Tm841; Chain: A;domain 3 › Dihydroxyacetone kinase; domain 2 | 0.52 | 45.0 | 4.37e-01 | 100.0% | 85.4% |
ECOD (31)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5061637 | 301.4.1.1 ↗ | a+b three layers › Bacillus chorismate mutase-like › Holliday junction resolvase RusA › Holliday junction resolvase RusA › RusA | 0.89 | 86.0 | 8.40e-01 | 100.0% | 94.5% |
| 4156345 | 301.4.1.1 ↗ | a+b three layers › Bacillus chorismate mutase-like › Holliday junction resolvase RusA › Holliday junction resolvase RusA › RusA | 0.88 | 71.0 | 7.58e-01 | 100.0% | 95.0% |
| 3982309 | 301.4.1.1 ↗ | a+b three layers › Bacillus chorismate mutase-like › Holliday junction resolvase RusA › Holliday junction resolvase RusA › RusA | 0.83 | 67.0 | 7.11e-01 | 100.0% | 94.2% |
| 318712 | 301.4.1.1 ↗ | a+b three layers › Bacillus chorismate mutase-like › Holliday junction resolvase RusA › Holliday junction resolvase RusA › RusA | 0.83 | 66.0 | 7.02e-01 | 100.0% | 93.3% |
| 5083025 | 301.4.1.1 ↗ | a+b three layers › Bacillus chorismate mutase-like › Holliday junction resolvase RusA › Holliday junction resolvase RusA › RusA | 0.82 | 70.0 | 7.28e-01 | 100.0% | 96.0% |
| 3963267 | 301.4.1.1 ↗ | a+b three layers › Bacillus chorismate mutase-like › Holliday junction resolvase RusA › Holliday junction resolvase RusA › RusA | 0.80 | 67.0 | 6.94e-01 | 100.0% | 95.2% |
| 5032184 | 301.4.1.0 ↗ | a+b three layers › Bacillus chorismate mutase-like › Holliday junction resolvase RusA › Holliday junction resolvase RusA | 0.80 | 60.0 | 6.66e-01 | 100.0% | 96.4% |
| 5081957 | 301.4.1.0 ↗ | a+b three layers › Bacillus chorismate mutase-like › Holliday junction resolvase RusA › Holliday junction resolvase RusA | 0.76 | 72.0 | 6.97e-01 | 100.0% | 96.7% |
| 5036075 | 301.6.1.0 ↗ | a+b three layers › Bacillus chorismate mutase-like › Tubulin C-terminal domain-like › Tubulin C-terminal domain-like | 0.70 | 43.0 | 4.53e-01 | 100.0% | 68.9% |
| 4025756 | 301.2.1.1 ↗ | a+b three layers › Bacillus chorismate mutase-like › PurM N-terminal domain-like › PurM N-terminal domain-like › AIRS | 0.64 | 42.0 | 4.08e-01 | 100.0% | 58.7% |
| 5001175 | 301.2.1.1 ↗ | a+b three layers › Bacillus chorismate mutase-like › PurM N-terminal domain-like › PurM N-terminal domain-like › AIRS | 0.61 | 40.0 | 3.91e-01 | 100.0% | 60.7% |
| 4943452 | 301.2.1.1 ↗ | a+b three layers › Bacillus chorismate mutase-like › PurM N-terminal domain-like › PurM N-terminal domain-like › AIRS | 0.61 | 41.0 | 4.07e-01 | 100.0% | 64.1% |
| 4534141 | 301.2.1.1 ↗ | a+b three layers › Bacillus chorismate mutase-like › PurM N-terminal domain-like › PurM N-terminal domain-like › AIRS | 0.61 | 42.0 | 4.19e-01 | 100.0% | 67.9% |
| 5011185 | 4143.1.1.0 ↗ | a+b two layers › THUMP domain-like › THUMP domain-like › THUMP domain-like | 0.60 | 38.0 | 4.47e-01 | 100.0% | 100.0% |
| 4984150 | 4143.1.1.1 ↗ | a+b two layers › THUMP domain-like › THUMP domain-like › THUMP domain-like › THUMP | 0.59 | 37.0 | 4.39e-01 | 97.8% | 97.6% |
| 4982903 | 301.2.1.1 ↗ | a+b three layers › Bacillus chorismate mutase-like › PurM N-terminal domain-like › PurM N-terminal domain-like › AIRS | 0.59 | 38.0 | 3.75e-01 | 100.0% | 58.7% |
| 5071970 | 301.2.1.1 ↗ | a+b three layers › Bacillus chorismate mutase-like › PurM N-terminal domain-like › PurM N-terminal domain-like › AIRS | 0.58 | 40.0 | 3.73e-01 | 100.0% | 54.9% |
| 4987617 | 301.6.1.3 ↗ | a+b three layers › Bacillus chorismate mutase-like › Tubulin C-terminal domain-like › Tubulin C-terminal domain-like › CetZ_C | 0.58 | 42.0 | 3.97e-01 | 100.0% | 62.4% |
| 4943512 | 301.2.1.1 ↗ | a+b three layers › Bacillus chorismate mutase-like › PurM N-terminal domain-like › PurM N-terminal domain-like › AIRS | 0.57 | 38.0 | 3.74e-01 | 100.0% | 60.6% |
| 5051325 | 301.2.1.1 ↗ | a+b three layers › Bacillus chorismate mutase-like › PurM N-terminal domain-like › PurM N-terminal domain-like › AIRS | 0.56 | 40.0 | 3.59e-01 | 100.0% | 52.6% |
| 4200664 | 301.2.1.1 ↗ | a+b three layers › Bacillus chorismate mutase-like › PurM N-terminal domain-like › PurM N-terminal domain-like › AIRS | 0.56 | 39.0 | 3.55e-01 | 100.0% | 51.6% |
| 4080241 | 301.2.1.1 ↗ | a+b three layers › Bacillus chorismate mutase-like › PurM N-terminal domain-like › PurM N-terminal domain-like › AIRS | 0.56 | 38.0 | 3.82e-01 | 100.0% | 68.9% |
| 4585803 | 301.2.1.1 ↗ | a+b three layers › Bacillus chorismate mutase-like › PurM N-terminal domain-like › PurM N-terminal domain-like › AIRS | 0.55 | 39.0 | 3.59e-01 | 100.0% | 54.4% |
| 4947539 | 301.2.1.1 ↗ | a+b three layers › Bacillus chorismate mutase-like › PurM N-terminal domain-like › PurM N-terminal domain-like › AIRS | 0.55 | 40.0 | 3.75e-01 | 100.0% | 60.0% |
| 5021161 | 301.2.1.1 ↗ | a+b three layers › Bacillus chorismate mutase-like › PurM N-terminal domain-like › PurM N-terminal domain-like › AIRS | 0.55 | 36.0 | 3.52e-01 | 100.0% | 58.1% |
| 3603558 | 301.2.1.1 ↗ | a+b three layers › Bacillus chorismate mutase-like › PurM N-terminal domain-like › PurM N-terminal domain-like › AIRS | 0.54 | 38.0 | 3.71e-01 | 100.0% | 63.9% |
| 4981015 | 301.2.1.1 ↗ | a+b three layers › Bacillus chorismate mutase-like › PurM N-terminal domain-like › PurM N-terminal domain-like › AIRS | 0.53 | 38.0 | 3.44e-01 | 100.0% | 53.5% |
| 3977319 | 3008.1.1.0 ↗ | a+b three layers › A subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › A subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › A subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | 0.52 | 36.0 | 4.11e-01 | 91.2% | 100.0% |
| 1937169 | 301.13.1.2 ↗ | a+b three layers › Bacillus chorismate mutase-like › DAK1/DegV C-terminal domain › DAK1/DegV C-terminal domain › Dak1 | 0.52 | 45.0 | 4.37e-01 | 100.0% | 85.4% |
| 4935322 | 301.2.1.1 ↗ | a+b three layers › Bacillus chorismate mutase-like › PurM N-terminal domain-like › PurM N-terminal domain-like › AIRS | 0.52 | 41.0 | 3.77e-01 | 100.0% | 65.1% |
| 3500068 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.50 | 35.0 | 3.73e-01 | 90.4% | 80.8% |
D2
medium
residues 1-88