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KR296686.1__AKJ74313.1__SP22_6__00006
Bact-VirKR296686.1__AKJ74313.1__SP22_6__00006
Identity
- Accession:
- KR296686 ↗
- Kingdom:
- phage
Quality
82.6
mean pLDDT
Taxonomy
TaxID: 1654885
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 15-76
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF17289.9 best | Terminase_6C | 52.5 | 7.90e-14 | 95.2% | 39.4% |
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4dkwA00 | 3.30.420.280 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › | 0.98 | 94.0 | 6.28e-01 | 100.0% | 32.0% |
| 5i41B00 | 1.10.1660.10 | Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › | 0.58 | 37.0 | 3.70e-01 | 100.0% | 61.2% |
| 2w4sA00 | 1.10.10.1440 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › PHAX RNA-binding domain | 0.52 | 35.0 | 3.19e-01 | 98.4% | 50.0% |
| 1xtfA00 | 3.90.1240.10 | Alpha Beta › Alpha-Beta Complex › Zincin-like › "Metalloproteases (""zincins""), catalytic domain like" | 0.52 | 40.0 | 2.47e-01 | 87.1% | 77.8% |
| 2vt1B00 | 3.40.1690.10 | Alpha Beta › 3-Layer(aba) Sandwich › name from scop › secretion proteins EscU | 0.51 | 41.0 | 3.88e-01 | 95.2% | 90.1% |
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 185684 | 2484.1.1.77 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Terminase_6C | 0.98 | 94.0 | 6.28e-01 | 100.0% | 32.0% |
| 4961972 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.59 | 42.0 | 3.90e-01 | 75.8% | 67.5% |
| 4030787 | 605.1.1.303 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › Terminase_4 | 0.53 | 39.0 | 3.47e-01 | 83.9% | 84.0% |
| 3183367 | 109.4.1.356 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Fungal_trans | 0.52 | 44.0 | 2.97e-01 | 100.0% | 23.3% |
| 5054661 | 101.1.2.209 ↗ | alpha arrays › HTH › HTH › winged helix domain › MJ1010-like_2nd | 0.52 | 33.0 | 3.34e-01 | 74.2% | 61.5% |
| 3186208 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.50 | 31.0 | 3.08e-01 | 95.2% | 58.5% |