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KR296686.1__AKJ74357.1__SP22_51__00050

Bact-Vir

KR296686.1__AKJ74357.1__SP22_51__00050

Identity

Accession:
KR296686 ↗
Kingdom:
phage

Quality

75.1 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Lederbergvirus› Salmonella_phage_22

TaxID: 1654885

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 11-54
PDB
Domain cluster: representative
CATH (2)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5vmzA01 3.30.160.60 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger 0.61 41.0 4.31e-01 70.5% 79.5%
6my0A02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.57 40.0 3.62e-01 77.3% 52.3%
ECOD (12)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
2322754 376.1.2.3 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain › C1_4 0.75 52.0 4.37e-01 72.7% 75.7%
3574435 386.1.1.18 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2_jaz 0.63 43.0 4.17e-01 72.7% 68.6%
3239380 386.1.1.20 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-met 0.62 42.0 4.13e-01 72.7% 70.0%
3435151 386.1.1.0 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.60 39.0 4.13e-01 70.5% 82.9%
3561754 386.1.1.1 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2 0.59 37.0 3.56e-01 70.5% 54.0%
3620075 376.1.1.37 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › SLX1_C 0.58 45.0 3.65e-01 90.9% 53.7%
4503505 376.1.1.37 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › SLX1_C 0.58 44.0 3.39e-01 90.9% 52.5%
3415237 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.57 39.0 2.56e-01 75.0% 25.6%
3433647 386.1.1.0 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.56 39.0 3.70e-01 70.5% 72.2%
4933788 2484.1.1.302 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Cas12f1-like_TNB 0.55 40.0 2.69e-01 88.6% 16.7%
5031811 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.55 38.0 3.80e-01 75.0% 71.1%
3786259 386.1.1.1 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2 0.53 36.0 3.04e-01 75.0% 45.6%