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KR296691.1__AKJ73869.1__SP37_2__00002

Bact-Vir

KR296691.1__AKJ73869.1__SP37_2__00002

Identity

Accession:
KR296691 ↗
Kingdom:
phage

Quality

66.6 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 64-143
PDB
CATH (35)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3l7wA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 45.0 4.19e-01 72.5% 56.2%
3l9fA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.63 44.0 4.29e-01 73.8% 71.9%
2eshA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 43.0 3.89e-01 72.5% 56.1%
4esbA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 43.0 4.05e-01 73.8% 61.2%
5f7qC01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 42.0 4.43e-01 70.0% 80.0%
3elkA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 43.0 3.93e-01 72.5% 58.1%
1dfuP00 2.40.240.10 Mainly Beta › Beta Barrel › Ribosomal Protein L25; Chain P › Ribosomal Protein L25; Chain P 0.61 46.0 4.36e-01 95.0% 67.0%
4ejoA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.60 42.0 3.79e-01 72.5% 52.7%
2l2oA00 1.10.10.1540 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Costar domain 0.60 43.0 4.23e-01 75.0% 80.0%
4g6qA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 41.0 4.00e-01 73.8% 66.7%
5h20A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 41.0 3.85e-01 73.8% 60.2%
1ulyA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 40.0 3.92e-01 73.8% 64.0%
3h2bB00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.58 41.0 3.11e-01 73.8% 45.9%
4clfA02 3.30.70.1230 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Nucleotide cyclase, GGDEF domain 0.58 50.0 3.87e-01 96.2% 68.5%
2mlgA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.58 44.0 4.47e-01 86.3% 84.4%
4hqeA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.58 41.0 3.76e-01 73.8% 56.2%
2bueA00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.58 42.0 3.18e-01 76.2% 49.7%
2ip2A02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.57 40.0 2.89e-01 73.8% 39.4%
4kigA02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.57 40.0 3.14e-01 72.5% 55.6%
3c18A03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 39.0 4.36e-01 71.2% 100.0%
5cm2Z00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.57 41.0 3.10e-01 75.0% 55.4%
3dp7A03 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.56 39.0 3.13e-01 73.8% 47.0%
2qmlA00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.56 40.0 2.97e-01 75.0% 46.1%
2imqX00 3.60.10.10 Alpha Beta › 4-Layer Sandwich › Deoxyribonuclease I; Chain A › Endonuclease/exonuclease/phosphatase 0.56 50.0 3.43e-01 100.0% 84.6%
1j5uA01 3.55.10.10 Alpha Beta › 3-Layer(bab) Sandwich › Archease, Possible Chaperone; Chain: A; domain 1 › Archease domain 0.55 35.0 3.12e-01 70.0% 43.6%
2pc1A00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.55 39.0 3.04e-01 75.0% 53.2%
3r0aA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.55 38.0 3.42e-01 73.8% 49.2%
3juwA00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.55 39.0 3.00e-01 73.8% 52.7%
2cxiA01 3.30.56.10 Alpha Beta › 2-Layer Sandwich › Phenylalanyl-tRNA Synthetase; Chain B, domain 1 › 0.54 39.0 3.93e-01 95.0% 77.2%
3ndiA02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.53 37.0 2.86e-01 73.8% 44.1%
1nj8A03 3.30.110.30 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › C-terminal domain of ProRS 0.53 37.0 4.13e-01 72.5% 96.7%
7n0eB02 3.30.565.10 Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain 0.52 35.0 3.10e-01 73.8% 46.7%
4ne4A01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.51 43.0 3.46e-01 96.2% 87.4%
1i94H01 3.30.1370.30 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › 0.50 34.0 3.52e-01 75.0% 74.4%
2cpmA00 3.30.1370.50 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › R3H-like domain 0.50 40.0 3.81e-01 90.0% 74.5%
ECOD (73)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3644664 256.1.1.7 a+b two layers › MTH1598-like › MTH1598-like › MTH1598-like › DUF7477 0.69 37.0 5.03e-01 70.0% 100.0%
3988732 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.65 45.0 4.14e-01 72.5% 54.6%
2791256 306.5.1.1 a+b two layers › Glucose permease domain IIB-like › GTP cyclohydrolase I feedback regulatory protein, GFRP › GTP cyclohydrolase I feedback regulatory protein, GFRP › GFRP 0.65 45.0 4.42e-01 71.2% 97.7%
5008107 101.1.2.15 alpha arrays › HTH › HTH › winged helix domain › MarR 0.65 43.0 3.97e-01 71.2% 52.4%
4265687 239.1.1.3 beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal_L25p 0.64 47.0 4.49e-01 95.0% 66.3%
4978412 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.64 44.0 3.49e-01 72.5% 37.1%
4953964 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.64 44.0 4.00e-01 72.5% 61.8%
4999286 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.64 44.0 3.43e-01 72.5% 36.1%
5071269 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.64 44.0 3.33e-01 73.8% 31.0%
3587826 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.64 44.0 4.02e-01 72.5% 59.3%
5064203 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.63 44.0 4.26e-01 72.5% 65.6%
5058268 101.1.2.54 alpha arrays › HTH › HTH › winged helix domain › Penicillinase_R 0.63 44.0 3.96e-01 73.8% 53.0%
3957963 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.62 43.0 4.13e-01 72.5% 67.4%
4593646 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.62 43.0 4.23e-01 73.8% 66.7%
5014384 101.1.2.54 alpha arrays › HTH › HTH › winged helix domain › Penicillinase_R 0.62 44.0 3.91e-01 73.8% 53.9%
5008016 2003.1.5.3 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_2 0.62 44.0 3.03e-01 73.8% 37.0%
5053957 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.62 43.0 4.61e-01 73.8% 88.2%
5079724 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.62 51.0 4.71e-01 98.8% 70.5%
4964272 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.62 42.0 3.92e-01 73.8% 54.3%
5054938 101.1.2.271 alpha arrays › HTH › HTH › winged helix domain › B-block_TFIIIC 0.62 42.0 3.76e-01 73.8% 48.7%
4974951 101.1.2.101 alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.61 43.0 4.08e-01 73.8% 65.3%
4949895 2003.1.5.66 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_11 0.61 42.0 3.22e-01 72.5% 50.3%
3587554 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.60 42.0 3.93e-01 72.5% 59.0%
5030630 2003.1.5.66 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_11 0.60 43.0 3.16e-01 73.8% 42.0%
5001098 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.60 42.0 4.09e-01 73.8% 67.8%
3743748 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.60 39.0 3.78e-01 73.8% 58.9%
4949577 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.60 43.0 4.07e-01 75.0% 68.4%
3483771 101.1.2.394 alpha arrays › HTH › HTH › winged helix domain › eWH_GTF3C1 0.60 51.0 4.82e-01 95.0% 84.2%
3382927 2003.1.5.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases 0.60 43.0 3.14e-01 75.0% 76.9%
4967545 2003.1.5.66 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_11 0.60 42.0 3.17e-01 73.8% 51.3%
3280466 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.59 42.0 3.23e-01 73.8% 34.7%
4974810 2003.1.5.66 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_11 0.59 41.0 3.07e-01 72.5% 53.3%
4138721 101.1.9.20 alpha arrays › HTH › HTH › Putative DNA-binding domain › PhetRS_B1 0.59 42.0 4.33e-01 95.0% 78.7%
4979041 101.1.2.14 alpha arrays › HTH › HTH › winged helix domain › HTH_5 0.59 40.0 3.26e-01 73.8% 36.8%
3782708 2003.1.5.120 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Bmt2 0.58 41.0 3.18e-01 73.8% 76.7%
4991088 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.58 40.0 4.08e-01 72.5% 72.5%
5078667 101.1.2.14 alpha arrays › HTH › HTH › winged helix domain › HTH_5 0.58 40.0 3.54e-01 73.8% 47.5%
1146763 101.1.2.72 alpha arrays › HTH › HTH › winged helix domain › Sulfolobus_pRN 0.58 44.0 4.47e-01 86.3% 84.4%
5022274 2003.1.5.66 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_11 0.58 42.0 3.12e-01 76.2% 45.4%
5059853 101.1.2.54 alpha arrays › HTH › HTH › winged helix domain › Penicillinase_R 0.58 40.0 3.61e-01 73.8% 51.3%
3170824 2003.1.5.120 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Bmt2 0.57 40.0 3.09e-01 73.8% 71.9%
2978887 2003.1.5.3 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_2 0.57 40.0 2.91e-01 73.8% 42.1%
4337010 101.1.9.0 alpha arrays › HTH › HTH › Putative DNA-binding domain 0.57 43.0 4.35e-01 93.8% 80.0%
3600662 2003.1.5.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases 0.57 40.0 2.66e-01 73.8% 58.5%
5077319 101.1.2.14 alpha arrays › HTH › HTH › winged helix domain › HTH_5 0.57 46.0 3.58e-01 91.3% 49.5%
4975568 2003.1.5.66 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_11 0.57 39.0 2.93e-01 72.5% 42.0%
4959935 101.1.2.136 alpha arrays › HTH › HTH › winged helix domain › HTH_20 0.56 38.0 2.99e-01 73.8% 30.8%
165416 213.1.1.28 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_8 0.56 40.0 2.97e-01 75.0% 46.1%
5031481 101.1.2.136 alpha arrays › HTH › HTH › winged helix domain › HTH_20 0.56 38.0 3.46e-01 73.8% 51.8%
4982703 101.1.2.136 alpha arrays › HTH › HTH › winged helix domain › HTH_20 0.55 38.0 3.68e-01 73.8% 63.3%
4961331 213.1.1.28 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_8 0.55 40.0 3.00e-01 76.2% 46.6%
3870015 246.3.1.4 a+b four layers › Carbon-nitrogen hydrolase-like › DNase I-like › DNase I-like › Exo_endo_phos2 0.55 50.0 3.28e-01 100.0% 91.3%
4040332 101.1.9.20 alpha arrays › HTH › HTH › Putative DNA-binding domain › PhetRS_B1 0.55 40.0 4.03e-01 95.0% 76.2%
3474774 246.3.1.4 a+b four layers › Carbon-nitrogen hydrolase-like › DNase I-like › DNase I-like › Exo_endo_phos2 0.55 50.0 3.32e-01 100.0% 88.4%
3928025 246.3.1.4 a+b four layers › Carbon-nitrogen hydrolase-like › DNase I-like › DNase I-like › Exo_endo_phos2 0.55 50.0 3.34e-01 100.0% 85.0%
4950266 2003.1.5.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases 0.55 39.0 3.27e-01 73.8% 56.3%
4026316 2003.1.5.45 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_8 0.55 39.0 2.86e-01 75.0% 33.6%
136495 213.1.1.25 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_3 0.55 39.0 3.00e-01 73.8% 52.7%
3874027 246.3.1.4 a+b four layers › Carbon-nitrogen hydrolase-like › DNase I-like › DNase I-like › Exo_endo_phos2 0.55 50.0 3.30e-01 100.0% 88.1%
3974590 213.1.1.27 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_7 0.54 39.0 3.14e-01 75.0% 56.0%
5016171 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.54 38.0 3.07e-01 73.8% 38.7%
3392791 246.3.1.4 a+b four layers › Carbon-nitrogen hydrolase-like › DNase I-like › DNase I-like › Exo_endo_phos2 0.54 49.0 3.21e-01 100.0% 90.6%
3384904 256.1.1.0 a+b two layers › MTH1598-like › MTH1598-like › MTH1598-like 0.54 38.0 2.26e-01 72.5% 66.4%
3531322 101.1.2.564 alpha arrays › HTH › HTH › winged helix domain › PF27514 0.53 33.0 3.63e-01 73.8% 76.9%
4385003 2003.1.5.25 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › GidB 0.53 38.0 2.74e-01 75.0% 29.9%
5068528 213.1.1.0 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) 0.53 38.0 3.19e-01 73.8% 53.1%
4987072 328.5.1.1 a+b two layers › IF3-like › SirA-like › SirA-like › TusA 0.52 38.0 3.85e-01 76.2% 92.4%
5024972 328.5.1.0 a+b two layers › IF3-like › SirA-like › SirA-like 0.52 36.0 3.66e-01 72.5% 97.5%
4152454 213.1.1.28 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_8 0.52 37.0 2.79e-01 76.2% 93.7%
5073129 328.5.1.1 a+b two layers › IF3-like › SirA-like › SirA-like › TusA 0.51 36.0 3.75e-01 73.8% 94.7%
4945580 328.5.1.0 a+b two layers › IF3-like › SirA-like › SirA-like 0.51 36.0 3.66e-01 73.8% 89.9%
4247432 2003.1.5.60 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › FmrO 0.51 36.0 2.70e-01 75.0% 39.0%
3566131 101.1.2.24 alpha arrays › HTH › HTH › winged helix domain › MAGE 0.51 43.0 3.13e-01 96.2% 37.1%