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KR296692.1__AKJ73653.1__SP38_51__00051
Bact-VirKR296692.1__AKJ73653.1__SP38_51__00051
Identity
- Accession:
- KR296692 ↗
- Kingdom:
- phage
Quality
80.1
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Pantevenvirales›
Ackermannviridae›
Kuttervirus›
Salmonella_phage_38
TaxID: 1654891
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 52-126
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF23786.2 best | Baseplate_wedge | 106.6 | 2.30e-30 | 100.0% | 28.6% |
CATH (26)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4alzA03 | 3.30.70.1770 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.69 | 45.0 | 4.83e-01 | 97.3% | 78.1% |
| 1dgjA05 | 3.30.365.10 | Alpha Beta › 2-Layer Sandwich › Aldehyde Oxidoreductase; domain 4 › Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain | 0.68 | 43.0 | 3.99e-01 | 100.0% | 51.1% |
| 3gr0D01 | 3.30.70.1780 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.68 | 38.0 | 4.75e-01 | 93.3% | 100.0% |
| 1amuA04 | 3.30.300.30 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › ANL, C-terminal domain | 0.66 | 46.0 | 4.24e-01 | 100.0% | 56.2% |
| 1ylqA00 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.65 | 52.0 | 4.87e-01 | 100.0% | 69.9% |
| 6vhvA01 | 3.30.300.30 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › ANL, C-terminal domain | 0.65 | 43.0 | 4.03e-01 | 100.0% | 54.8% |
| 4gs5A02 | 3.30.300.30 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › ANL, C-terminal domain | 0.64 | 45.0 | 4.08e-01 | 100.0% | 53.3% |
| 3vseB02 | 3.30.750.80 | Alpha Beta › 2-Layer Sandwich › Transcription Regulator spoIIAA › RNA methyltransferase domain (HRMD) like | 0.64 | 40.0 | 3.73e-01 | 100.0% | 48.0% |
| 2b78A02 | 3.30.750.80 | Alpha Beta › 2-Layer Sandwich › Transcription Regulator spoIIAA › RNA methyltransferase domain (HRMD) like | 0.63 | 41.0 | 3.73e-01 | 100.0% | 49.0% |
| 3bioA02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.62 | 43.0 | 3.75e-01 | 100.0% | 47.4% |
| 6l4lA02 | 3.10.310.10 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 | 0.62 | 44.0 | 3.64e-01 | 100.0% | 41.2% |
| 3pbkA02 | 3.30.300.30 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › ANL, C-terminal domain | 0.61 | 45.0 | 4.03e-01 | 100.0% | 54.6% |
| 1kw3B01 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.59 | 52.0 | 4.39e-01 | 100.0% | 90.9% |
| 4alzA01 | 3.30.1340.30 | Alpha Beta › 2-Layer Sandwich › Histidine-containing Protein; Chain: A; › | 0.59 | 37.0 | 3.94e-01 | 98.7% | 74.2% |
| 3iplA02 | 3.30.300.30 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › ANL, C-terminal domain | 0.59 | 41.0 | 4.03e-01 | 100.0% | 66.3% |
| 4r0mA02 | 3.30.300.30 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › ANL, C-terminal domain | 0.59 | 45.0 | 4.02e-01 | 100.0% | 57.4% |
| 4g1iA03 | 3.30.70.1770 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.58 | 39.0 | 4.08e-01 | 100.0% | 76.8% |
| 1mpyA01 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.58 | 50.0 | 4.09e-01 | 100.0% | 81.9% |
| 3iuzA00 | 3.10.180.50 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › | 0.57 | 48.0 | 3.27e-01 | 100.0% | 74.7% |
| 7c2fB01 | 3.40.20.10 | Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin | 0.55 | 37.0 | 3.60e-01 | 100.0% | 60.5% |
| 2rk9B00 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.55 | 46.0 | 4.07e-01 | 97.3% | 99.1% |
| 1hqz800 | 3.40.20.10 | Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin | 0.54 | 40.0 | 3.43e-01 | 100.0% | 47.0% |
| 1josA00 | 3.30.300.20 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain | 0.53 | 43.0 | 3.97e-01 | 100.0% | 68.0% |
| 4m1aA00 | 3.30.429.10 | Alpha Beta › 2-Layer Sandwich › Macrophage Migration Inhibitory Factor › Macrophage Migration Inhibitory Factor | 0.53 | 46.0 | 4.16e-01 | 100.0% | 88.8% |
| 1f06A02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.51 | 43.0 | 3.58e-01 | 100.0% | 52.2% |
| 7whgG02 | 3.40.20.10 | Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin | 0.51 | 34.0 | 3.22e-01 | 100.0% | 55.4% |
ECOD (52)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5050086 | 327.11.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Prokaryotic type KH domain (KH-domain type II) | 0.71 | 48.0 | 4.96e-01 | 97.3% | 74.3% |
| 3979017 | 327.11.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Prokaryotic type KH domain (KH-domain type II) | 0.70 | 46.0 | 4.64e-01 | 100.0% | 68.0% |
| 5036382 | 327.7.1.2 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Cation efflux protein cytoplasmic domain-like › Cation efflux protein cytoplasmic domain-like › FKBP26_C | 0.70 | 45.0 | 4.83e-01 | 97.3% | 76.9% |
| 1851173 | 3261.1.1.4 ↗ | a+b two layers › amino-terminal domain of OmpATb › amino-terminal domain of OmpATb › amino-terminal domain of OmpATb › Yop-YscD_ppl_3rd | 0.69 | 45.0 | 4.83e-01 | 97.3% | 78.1% |
| 3942252 | 3261.1.1.8 ↗ | a+b two layers › amino-terminal domain of OmpATb › amino-terminal domain of OmpATb › amino-terminal domain of OmpATb › DUF2612 | 0.69 | 46.0 | 4.06e-01 | 98.7% | 47.3% |
| 3500879 | 327.11.1.9 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Prokaryotic type KH domain (KH-domain type II) › Phage_Wedge1 | 0.68 | 47.0 | 4.51e-01 | 100.0% | 63.5% |
| 3980816 | 3261.1.1.0 ↗ | a+b two layers › amino-terminal domain of OmpATb › amino-terminal domain of OmpATb › amino-terminal domain of OmpATb | 0.65 | 43.0 | 4.31e-01 | 100.0% | 66.7% |
| 1155906 | 327.5.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins | 0.64 | 45.0 | 4.08e-01 | 100.0% | 53.3% |
| 5029665 | 327.7.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Cation efflux protein cytoplasmic domain-like › Cation efflux protein cytoplasmic domain-like | 0.64 | 39.0 | 4.25e-01 | 97.3% | 80.0% |
| 2526345 | 7081.1.1.0 ↗ | a+b two layers › Transactivation domain (TAD) of FoxM1 › Transactivation domain (TAD) of FoxM1 › Transactivation domain (TAD) of FoxM1 | 0.64 | 43.0 | 4.89e-01 | 98.7% | 98.1% |
| 4863910 | 327.5.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins | 0.63 | 44.0 | 4.33e-01 | 100.0% | 67.5% |
| 3964966 | 102.7.1.1 ↗ | alpha arrays › HhH/H2TH › Baseplate wedge protein gp7 domain IV › Baseplate wedge protein gp7 domain IV › Tail_P2_I | 0.63 | 56.0 | 4.67e-01 | 100.0% | 55.6% |
| 5030773 | 316.1.1.27 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › Polbeta | 0.63 | 50.0 | 3.99e-01 | 100.0% | 43.2% |
| 4168423 | 327.10.1.6 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ribosome-binding factor A (RbfA)-related › Ribosome-binding factor A (RbfA)-related › DNA_pol3_a_NI | 0.63 | 43.0 | 4.24e-01 | 98.7% | 66.3% |
| 5011218 | 316.1.1.0 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase | 0.63 | 44.0 | 4.27e-01 | 100.0% | 65.9% |
| 5000389 | 316.1.1.0 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase | 0.62 | 50.0 | 4.26e-01 | 100.0% | 54.2% |
| 1200920 | 298.1.1.16 ↗ | a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › DAPDH_C | 0.62 | 43.0 | 3.57e-01 | 100.0% | 40.6% |
| 4973380 | 316.1.1.27 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › Polbeta | 0.62 | 49.0 | 4.36e-01 | 100.0% | 61.0% |
| 4499587 | 316.1.1.2 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTP_transf_2 | 0.61 | 47.0 | 3.53e-01 | 100.0% | 34.4% |
| 3958648 | 327.11.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Prokaryotic type KH domain (KH-domain type II) | 0.60 | 39.0 | 3.92e-01 | 98.7% | 65.3% |
| 4993307 | 316.1.1.27 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › Polbeta | 0.59 | 47.0 | 4.19e-01 | 100.0% | 59.6% |
| 185290 | 327.13.1.3 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif I in type III secretion system › Ring-building motif I in type III secretion system › PrgH | 0.59 | 39.0 | 4.09e-01 | 100.0% | 76.5% |
| 4959368 | 316.1.1.27 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › Polbeta | 0.58 | 45.0 | 3.84e-01 | 100.0% | 51.2% |
| 4642209 | 316.1.1.2 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTP_transf_2 | 0.58 | 45.0 | 3.63e-01 | 100.0% | 42.7% |
| 5063391 | 324.1.1.1 ↗ | a+b two layers › OsmC-like › OsmC-like › OsmC-like › OsmC | 0.58 | 46.0 | 3.84e-01 | 97.3% | 50.0% |
| 4642603 | 316.1.1.0 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase | 0.58 | 44.0 | 3.37e-01 | 100.0% | 35.4% |
| 4961077 | 131.1.1.3 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD | 0.57 | 49.0 | 3.48e-01 | 100.0% | 73.8% |
| 5049008 | 316.1.1.2 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTP_transf_2 | 0.57 | 46.0 | 4.07e-01 | 100.0% | 60.9% |
| 4461227 | 316.1.1.2 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTP_transf_2 | 0.56 | 43.0 | 3.41e-01 | 100.0% | 39.4% |
| 3925397 | 327.5.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins | 0.56 | 39.0 | 3.60e-01 | 100.0% | 55.0% |
| 3986529 | 327.13.1.3 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif I in type III secretion system › Ring-building motif I in type III secretion system › PrgH | 0.56 | 39.0 | 3.64e-01 | 100.0% | 57.9% |
| 3170755 | 327.7.1.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Cation efflux protein cytoplasmic domain-like › Cation efflux protein cytoplasmic domain-like › ZT_dimer | 0.55 | 42.0 | 3.96e-01 | 100.0% | 67.8% |
| 2578927 | 327.13.1.3 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif I in type III secretion system › Ring-building motif I in type III secretion system › PrgH | 0.55 | 37.0 | 3.83e-01 | 100.0% | 76.5% |
| 4986728 | 316.1.1.27 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › Polbeta | 0.55 | 43.0 | 3.74e-01 | 100.0% | 54.8% |
| 4967193 | 316.1.1.2 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTP_transf_2 | 0.55 | 44.0 | 3.96e-01 | 100.0% | 62.9% |
| 3928932 | 327.7.1.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Cation efflux protein cytoplasmic domain-like › Cation efflux protein cytoplasmic domain-like › ZT_dimer | 0.55 | 40.0 | 3.70e-01 | 100.0% | 59.0% |
| 4928546 | 327.7.1.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Cation efflux protein cytoplasmic domain-like › Cation efflux protein cytoplasmic domain-like › ZT_dimer | 0.54 | 40.0 | 3.92e-01 | 100.0% | 73.8% |
| 5039586 | 316.1.1.27 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › Polbeta | 0.54 | 43.0 | 3.90e-01 | 100.0% | 62.9% |
| 3653067 | 327.7.1.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Cation efflux protein cytoplasmic domain-like › Cation efflux protein cytoplasmic domain-like › ZT_dimer | 0.54 | 38.0 | 3.81e-01 | 98.7% | 70.0% |
| 3394261 | 327.11.1.4 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Prokaryotic type KH domain (KH-domain type II) › MRP-S24 | 0.54 | 41.0 | 3.44e-01 | 100.0% | 46.7% |
| 3924160 | 327.7.1.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Cation efflux protein cytoplasmic domain-like › Cation efflux protein cytoplasmic domain-like › ZT_dimer | 0.53 | 37.0 | 3.56e-01 | 98.7% | 62.2% |
| 5083492 | 327.7.1.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Cation efflux protein cytoplasmic domain-like › Cation efflux protein cytoplasmic domain-like › ZT_dimer | 0.53 | 39.0 | 3.84e-01 | 100.0% | 72.9% |
| 3997034 | 224.1.1.0 ↗ | a+b three layers › Gelsolin-like › Gelsolin-like › Gelsolin-like | 0.52 | 41.0 | 3.47e-01 | 100.0% | 50.0% |
| 5016234 | 327.7.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Cation efflux protein cytoplasmic domain-like › Cation efflux protein cytoplasmic domain-like | 0.51 | 36.0 | 3.50e-01 | 98.7% | 64.7% |
| 5020337 | 131.1.1.15 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › Ppx-GppA_III | 0.51 | 43.0 | 3.33e-01 | 100.0% | 81.5% |
| 4975755 | 327.7.1.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Cation efflux protein cytoplasmic domain-like › Cation efflux protein cytoplasmic domain-like › ZT_dimer | 0.51 | 39.0 | 3.77e-01 | 100.0% | 74.1% |
| 5078856 | 327.7.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Cation efflux protein cytoplasmic domain-like › Cation efflux protein cytoplasmic domain-like | 0.51 | 40.0 | 3.80e-01 | 100.0% | 71.1% |
| 5081368 | 131.1.1.0 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like | 0.51 | 43.0 | 3.28e-01 | 100.0% | 78.8% |
| 5037185 | 327.7.1.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Cation efflux protein cytoplasmic domain-like › Cation efflux protein cytoplasmic domain-like › ZT_dimer | 0.50 | 39.0 | 3.78e-01 | 100.0% | 75.3% |
| 3225254 | 224.1.1.2 ↗ | a+b three layers › Gelsolin-like › Gelsolin-like › Gelsolin-like › Gelsolin | 0.50 | 42.0 | 3.53e-01 | 100.0% | 52.1% |
| 4176611 | 327.7.1.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Cation efflux protein cytoplasmic domain-like › Cation efflux protein cytoplasmic domain-like › ZT_dimer | 0.50 | 37.0 | 3.49e-01 | 100.0% | 63.2% |
| 4946569 | 874.1.1.0 ↗ | a+b duplicates or obligate multimers › Smc hinge domain › Smc hinge domain › Smc hinge domain | 0.50 | 41.0 | 3.16e-01 | 100.0% | 36.0% |