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KR296692.1__AKJ73828.1__SP38_226__00226
Bact-VirKR296692.1__AKJ73828.1__SP38_226__00226
Identity
- Accession:
- KR296692 ↗
- Kingdom:
- phage
Quality
74.9
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Pantevenvirales›
Ackermannviridae›
Kuttervirus›
Salmonella_phage_38
TaxID: 1654891
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 23-79
Domain cluster:
representative
CATH (12)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5ip4E00 | 3.10.20.230 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Doublecortin domain | 0.66 | 42.0 | 3.73e-01 | 89.5% | 44.0% |
| 4o1sA00 | 2.170.16.10 | Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain | 0.53 | 40.0 | 2.93e-01 | 84.2% | 68.2% |
| 2ahmH02 | 3.30.70.3540 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Nsp8 replicase, head domain | 0.52 | 40.0 | 3.43e-01 | 84.2% | 72.0% |
| 7ncyB01 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.52 | 36.0 | 2.85e-01 | 71.9% | 56.2% |
| 2csyA01 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.51 | 39.0 | 3.91e-01 | 87.7% | 81.7% |
| 2ymmA02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.51 | 35.0 | 3.32e-01 | 71.9% | 94.5% |
| 7o52U02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 40.0 | 3.51e-01 | 91.2% | 56.8% |
| 1crnA00 | 3.30.1350.10 | Alpha Beta › 2-Layer Sandwich › Crambin › Thionin-like | 0.51 | 37.0 | 3.91e-01 | 84.2% | 97.8% |
| 4wz0A00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.51 | 38.0 | 3.13e-01 | 82.5% | 44.0% |
| 2cfmA02 | 3.30.470.30 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › DNA ligase/mRNA capping enzyme | 0.51 | 42.0 | 3.00e-01 | 100.0% | 77.6% |
| 4pxdA02 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.50 | 34.0 | 2.77e-01 | 70.2% | 88.7% |
| 3ub0A02 | 3.30.70.3540 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Nsp8 replicase, head domain | 0.50 | 39.0 | 3.37e-01 | 86.0% | 72.8% |
ECOD (12)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 184997 | 304.51.1.5 ↗ | a+b two layers › Alpha-beta plaits › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › Cas_Csy4 | 0.59 | 36.0 | 3.09e-01 | 84.2% | 35.1% |
| 3466070 | 365.1.1.1 ↗ | few secondary structure elements › Crambin-like › Crambin-like › Crambin-like › Thionin | 0.56 | 37.0 | 4.16e-01 | 80.7% | 100.0% |
| 3842229 | 376.1.1.23 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_2 | 0.55 | 42.0 | 3.66e-01 | 82.5% | 58.8% |
| 3475678 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.55 | 37.0 | 3.71e-01 | 71.9% | 73.3% |
| 3596219 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.53 | 39.0 | 3.42e-01 | 78.9% | 53.4% |
| 4012910 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.53 | 39.0 | 3.38e-01 | 78.9% | 52.2% |
| 3589293 | 3114.1.1.0 ↗ | beta sandwiches › Mucin-binding protein domain › Mucin-binding protein domain › Mucin-binding protein domain | 0.52 | 38.0 | 3.29e-01 | 82.5% | 86.0% |
| 3786153 | 376.1.1.23 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_2 | 0.52 | 38.0 | 3.06e-01 | 78.9% | 40.9% |
| 3708262 | 376.1.1.23 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_2 | 0.52 | 38.0 | 3.27e-01 | 78.9% | 53.3% |
| 4626960 | 304.25.1.1 ↗ | a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain › M20_dimer | 0.51 | 34.0 | 2.84e-01 | 70.2% | 87.8% |
| 7967 | 365.1.1.1 ↗ | few secondary structure elements › Crambin-like › Crambin-like › Crambin-like › Thionin | 0.51 | 37.0 | 3.94e-01 | 84.2% | 97.8% |
| 3601774 | 376.1.1.23 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_2 | 0.51 | 38.0 | 3.47e-01 | 82.5% | 61.3% |