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KR296694.1__AKJ73568.1__SP40_127__00127
Bact-VirKR296694.1__AKJ73568.1__SP40_127__00127
Identity
- Accession:
- KR296694 ↗
- Kingdom:
- phage
Quality
81.7
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 7-74
Domain cluster:
rep: EU408779.1__ACB54902.1__X__00003__D7-73
CATH (36)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3p24A01 | 2.40.128.470 | Mainly Beta › Beta Barrel › Lipocalin › | 0.84 | 59.0 | 4.46e-01 | 73.5% | 62.7% |
| 1p6pA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.82 | 54.0 | 4.30e-01 | 100.0% | 36.8% |
| 4rs6A01 | 3.30.1120.30 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › POLO box domain | 0.80 | 57.0 | 4.64e-01 | 73.5% | 44.9% |
| 1ealA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.77 | 52.0 | 4.15e-01 | 100.0% | 37.0% |
| 2xqyA01 | 3.30.500.50 | Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › | 0.75 | 51.0 | 3.71e-01 | 70.6% | 34.3% |
| 3asiA01 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.72 | 49.0 | 3.57e-01 | 70.6% | 51.7% |
| 1lfoA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.71 | 48.0 | 3.86e-01 | 100.0% | 37.0% |
| 2rcqA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.71 | 51.0 | 4.00e-01 | 95.6% | 36.9% |
| 1p32B00 | 3.10.280.10 | Alpha Beta › Roll › Mitochondrial Matrix Protein; Chain A › Mitochondrial glycoprotein | 0.70 | 52.0 | 3.83e-01 | 77.9% | 50.9% |
| 6c1zA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.69 | 51.0 | 4.00e-01 | 100.0% | 38.4% |
| 3cwxA00 | 3.40.1420.20 | Alpha Beta › 3-Layer(aba) Sandwich › Inhibitor of vertebrate lysozyme, Ivy › Pathogenicity island component CagD | 0.69 | 50.0 | 4.07e-01 | 76.5% | 96.0% |
| 1pz7A00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.67 | 47.0 | 3.35e-01 | 72.1% | 53.7% |
| 1vyfA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.67 | 49.0 | 3.87e-01 | 100.0% | 38.5% |
| 6w0pA02 | 1.50.10.10 | Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › | 0.67 | 45.0 | 2.75e-01 | 70.6% | 98.6% |
| 3sh4A00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.67 | 47.0 | 3.33e-01 | 73.5% | 50.8% |
| 2jhnA01 | 3.30.310.20 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › DNA-3-methyladenine glycosylase AlkA, N-terminal domain | 0.65 | 44.0 | 3.69e-01 | 70.6% | 47.8% |
| 4on1A01 | 2.40.128.470 | Mainly Beta › Beta Barrel › Lipocalin › | 0.63 | 55.0 | 4.27e-01 | 94.1% | 58.3% |
| 2yj6A02 | 3.40.1110.10 | Alpha Beta › 3-Layer(aba) Sandwich › Calcium-transporting ATPase, cytoplasmic domain N › Calcium-transporting ATPase, cytoplasmic domain N | 0.63 | 43.0 | 3.81e-01 | 100.0% | 50.5% |
| 3bvxA04 | 2.70.98.30 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Golgi alpha-mannosidase II; domain 4 | 0.61 | 52.0 | 3.43e-01 | 92.6% | 85.4% |
| 5upiA01 | 2.70.98.30 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Golgi alpha-mannosidase II; domain 4 | 0.61 | 42.0 | 3.09e-01 | 72.1% | 85.6% |
| 2eabB01 | 2.70.98.50 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › putative glycoside hydrolase family protein from bacillus halodurans | 0.61 | 46.0 | 3.14e-01 | 80.9% | 86.3% |
| 2v7sA00 | 3.30.2030.20 | Alpha Beta › 2-Layer Sandwich › TBP-like › | 0.61 | 41.0 | 3.08e-01 | 77.9% | 27.8% |
| 1jovA00 | 2.70.98.10 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.61 | 50.0 | 3.34e-01 | 89.7% | 42.8% |
| 6i8xA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.61 | 45.0 | 3.44e-01 | 98.5% | 35.6% |
| 3u1wA01 | 3.10.450.360 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.58 | 50.0 | 3.61e-01 | 92.6% | 44.8% |
| 4hbrA00 | 3.10.450.360 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.58 | 49.0 | 3.89e-01 | 92.6% | 59.3% |
| 6jhpA01 | 2.70.98.60 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › alpha-galactosidase from lactobacil brevis | 0.57 | 49.0 | 3.27e-01 | 100.0% | 44.4% |
| 4azpA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.57 | 49.0 | 3.86e-01 | 92.6% | 50.7% |
| 2wjsA02 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.56 | 49.0 | 3.51e-01 | 94.1% | 53.6% |
| 3iujA02 | 2.130.10.120 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Prolyl oligopeptidase, N-terminal domain | 0.56 | 46.0 | 3.08e-01 | 100.0% | 48.8% |
| 2wjsA01 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.55 | 50.0 | 3.61e-01 | 98.5% | 56.6% |
| 7xr9E01 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.53 | 48.0 | 3.39e-01 | 100.0% | 80.7% |
| 2acaA00 | 2.40.320.10 | Mainly Beta › Beta Barrel › Hypothetical Protein Pfu-838710-001 › Hypothetical Protein Pfu-838710-001 | 0.52 | 41.0 | 3.04e-01 | 85.3% | 66.1% |
| 1k3sA00 | 3.30.1460.10 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.51 | 34.0 | 3.00e-01 | 73.5% | 43.5% |
| 5jowA02 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.50 | 45.0 | 3.17e-01 | 98.5% | 65.5% |
| 4e3wA00 | 3.40.50.1240 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphoglycerate mutase-like | 0.50 | 38.0 | 2.49e-01 | 82.4% | 94.5% |
ECOD (34)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5015520 | 71.1.1.0 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB | 0.86 | 59.0 | 4.00e-01 | 70.6% | 30.0% |
| 5014023 | 71.1.1.0 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB | 0.80 | 56.0 | 3.98e-01 | 72.1% | 33.2% |
| 3556710 | 9.1.1.24 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin_7 | 0.76 | 51.0 | 4.10e-01 | 100.0% | 36.7% |
| 2582102 | 3338.2.1.2 ↗ | a+b two layers › Fragilysin-3 prodomain-like › Type II secretion chaperone CpaB › Type II secretion chaperone CpaB › BamI_lipocalin | 0.76 | 54.0 | 4.26e-01 | 73.5% | 45.7% |
| 5037122 | 4252.1.1.0 ↗ | beta barrels › AttH-like › AttH-like › AttH-like | 0.76 | 55.0 | 3.91e-01 | 100.0% | 26.7% |
| 3995040 | 10.1.1.17 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 | 0.75 | 52.0 | 3.59e-01 | 70.6% | 46.2% |
| 2552758 | 9.1.1.24 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin_7 | 0.73 | 49.0 | 3.85e-01 | 100.0% | 34.3% |
| 3799730 | 10.1.1.17 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 | 0.72 | 53.0 | 3.67e-01 | 76.5% | 48.0% |
| 3839277 | 241.16.1.1 ↗ | a+b two layers › Type III secretory system chaperone-like › protein CagD › protein CagD › CagD | 0.70 | 50.0 | 3.89e-01 | 75.0% | 85.5% |
| 3967111 | 3338.2.1.2 ↗ | a+b two layers › Fragilysin-3 prodomain-like › Type II secretion chaperone CpaB › Type II secretion chaperone CpaB › BamI_lipocalin | 0.70 | 58.0 | 4.70e-01 | 89.7% | 51.2% |
| 4147605 | 210.1.3.5 ↗ | a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_7 | 0.70 | 47.0 | 3.20e-01 | 70.6% | 80.0% |
| 3799467 | 4026.1.1.0 ↗ | a+b three layers › a+b domain in Rap/Ran-GAP (Pfam 02145) › a+b domain in Rap/Ran-GAP (Pfam 02145) › a+b domain in Rap/Ran-GAP (Pfam 02145) | 0.69 | 44.0 | 3.38e-01 | 91.2% | 29.0% |
| 4946526 | 12.3.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich | 0.67 | 60.0 | 3.95e-01 | 98.5% | 57.1% |
| 3244934 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.67 | 50.0 | 3.13e-01 | 100.0% | 16.1% |
| 3405538 | 219.1.1.111 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core, Rad4 | 0.66 | 47.0 | 3.04e-01 | 75.0% | 39.7% |
| 4942828 | 298.1.1.24 ↗ | a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › GFO_IDH_MocA_C3 | 0.65 | 46.0 | 3.46e-01 | 75.0% | 43.9% |
| 4203743 | 3338.2.1.0 ↗ | a+b two layers › Fragilysin-3 prodomain-like › Type II secretion chaperone CpaB › Type II secretion chaperone CpaB | 0.63 | 55.0 | 4.21e-01 | 94.1% | 48.3% |
| 3261967 | 633.23.1.0 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin | 0.63 | 45.0 | 3.04e-01 | 91.2% | 22.2% |
| 3707133 | 12.3.1.19 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Gal_mutarotas_2 | 0.62 | 56.0 | 3.89e-01 | 98.5% | 69.0% |
| 1309460 | 3338.1.1.1 ↗ | a+b two layers › Fragilysin-3 prodomain-like › Fragilysin-3 prodomain › Fragilysin-3 prodomain › fragilysinNterm | 0.62 | 56.0 | 4.36e-01 | 100.0% | 59.4% |
| None | — | 0.61 | 54.0 | 3.17e-01 | 100.0% | 60.0% | |
| 3596915 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.61 | 53.0 | 3.15e-01 | 100.0% | 59.5% |
| 3979335 | 241.1.1.0 ↗ | a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone | 0.60 | 46.0 | 3.75e-01 | 80.9% | 88.3% |
| 3733356 | 298.1.1.25 ↗ | a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › ox_reductase_C | 0.60 | 54.0 | 3.98e-01 | 100.0% | 40.0% |
| 3221612 | 12.3.1.42 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › DUF2152 | 0.59 | 46.0 | 3.20e-01 | 83.8% | 82.2% |
| 3913372 | 5.1.4.242 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PEP5_VPS11_N | 0.58 | 40.0 | 2.58e-01 | 70.6% | 51.3% |
| 4031750 | 274.1.1.25 ↗ | a+b two layers › Pili subunits › Pili subunits › Pili subunits › ComGF | 0.54 | 50.0 | 4.33e-01 | 100.0% | 72.7% |
| 5072273 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.53 | 45.0 | 3.69e-01 | 91.2% | 92.5% |
| 3323191 | 4099.1.1.0 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like | 0.53 | 40.0 | 3.95e-01 | 88.2% | 73.3% |
| 3485287 | 10.1.1.17 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 | 0.53 | 47.0 | 3.30e-01 | 97.1% | 45.4% |
| 3598127 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.52 | 45.0 | 2.84e-01 | 100.0% | 51.9% |
| 3739528 | 5.1.3.19 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Hira | 0.51 | 42.0 | 3.16e-01 | 100.0% | 41.5% |
| 5022781 | 5.1.5.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed | 0.50 | 40.0 | 2.70e-01 | 97.1% | 37.1% |
| 3597933 | 633.23.1.0 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin | 0.50 | 42.0 | 3.06e-01 | 91.2% | 66.3% |