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KR296694.1__AKJ73571.1__SP40_130__00130

Bact-Vir

KR296694.1__AKJ73571.1__SP40_130__00130

Identity

Accession:
KR296694 ↗
Kingdom:
phage

Quality

85.1 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Salmonella_phage_40

TaxID: 1654893

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 4-71
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF01467.33 best CTP_transf_like 23.8 6.00e-05 95.6% 38.4%
CATH (76)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2qjoA01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.88 73.0 5.08e-01 100.0% 30.6%
2q5cA02 3.40.50.10660 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › PrpR receptor domain-like 0.78 50.0 4.55e-01 100.0% 50.0%
3outA02 3.40.50.1860 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.74 49.0 4.24e-01 98.5% 43.5%
2vptA00 3.40.50.1110 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase 0.71 54.0 3.87e-01 100.0% 27.9%
4wnyA00 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.69 60.0 4.87e-01 98.5% 57.6%
7t85A01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.69 47.0 3.61e-01 98.5% 30.4%
6r8gA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.69 50.0 4.02e-01 100.0% 38.0%
3olqA00 3.40.50.12370 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.69 60.0 3.93e-01 100.0% 26.5%
3nzpB02 3.20.20.10 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Alanine racemase 0.68 60.0 4.03e-01 100.0% 30.7%
1bxbA00 3.20.20.150 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes 0.68 60.0 3.73e-01 100.0% 18.3%
2d1cA01 3.40.718.10 Alpha Beta › 3-Layer(aba) Sandwich › Isopropylmalate Dehydrogenase › Isopropylmalate Dehydrogenase 0.68 49.0 3.11e-01 100.0% 14.1%
3fg9C01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.67 58.0 4.64e-01 98.5% 57.1%
3idfA00 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.67 58.0 4.64e-01 98.5% 58.7%
1a0cA00 3.20.20.150 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes 0.67 57.0 3.53e-01 100.0% 18.3%
1di0A00 3.40.50.960 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Lumazine/riboflavin synthase 0.67 52.0 4.11e-01 98.5% 39.9%
1tufA02 3.20.20.10 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Alanine racemase 0.66 58.0 3.89e-01 98.5% 35.5%
3kizA01 3.30.1330.10 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › PurM-like, N-terminal domain 0.66 57.0 4.56e-01 100.0% 49.6%
1m32A02 3.40.640.10 Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.66 46.0 3.15e-01 100.0% 20.3%
2x9qB00 3.40.50.11710 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Cyclodipeptide synthase 0.65 58.0 4.03e-01 100.0% 33.3%
4rkrD02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.65 51.0 4.01e-01 100.0% 40.3%
1pbgA00 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.65 56.0 3.45e-01 98.5% 24.0%
2jepB00 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.65 56.0 3.57e-01 100.0% 20.7%
4gc3A00 3.20.20.140 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases 0.65 53.0 3.63e-01 100.0% 24.3%
1q77A00 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.65 57.0 4.55e-01 100.0% 58.0%
5mv0A01 3.30.70.2640 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Arenavirus RNA polymerase 0.65 54.0 5.01e-01 94.1% 89.9%
4psrA01 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.64 56.0 3.55e-01 100.0% 22.7%
3cs3A02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.64 51.0 4.05e-01 100.0% 42.8%
5bwiA02 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.64 55.0 3.63e-01 98.5% 24.7%
2yxoB00 3.20.20.140 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases 0.64 57.0 3.79e-01 98.5% 28.3%
1knwA02 3.20.20.10 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Alanine racemase 0.64 54.0 3.80e-01 100.0% 28.2%
1qu9A00 3.30.1330.40 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › RutC-like 0.64 53.0 4.35e-01 100.0% 49.6%
3ugsB00 3.40.1180.10 Alpha Beta › 3-Layer(aba) Sandwich › Undecaprenyl pyrophosphate synthetase › Decaprenyl diphosphate synthase-like 0.64 55.0 3.97e-01 100.0% 73.1%
2vhaA01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.63 52.0 3.87e-01 94.1% 35.0%
2h0aA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.63 49.0 3.95e-01 100.0% 42.6%
3ndzA00 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.63 54.0 3.48e-01 100.0% 24.3%
3t0qA00 3.40.850.10 Alpha Beta › 3-Layer(aba) Sandwich › Kinesin › Kinesin motor domain 0.63 54.0 3.58e-01 100.0% 48.7%
6acsA00 3.40.1180.10 Alpha Beta › 3-Layer(aba) Sandwich › Undecaprenyl pyrophosphate synthetase › Decaprenyl diphosphate synthase-like 0.62 54.0 3.81e-01 100.0% 69.8%
2cvhA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.62 51.0 3.62e-01 100.0% 29.4%
3i8bA01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.62 53.0 3.60e-01 100.0% 80.1%
3i3fB00 3.30.1330.40 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › RutC-like 0.62 53.0 4.30e-01 100.0% 50.8%
3tjrA00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.61 52.0 3.61e-01 100.0% 49.2%
2gm3A00 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.61 55.0 4.21e-01 100.0% 56.2%
4fdaA00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.61 52.0 3.67e-01 100.0% 35.0%
4yleA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.61 42.0 3.39e-01 95.6% 36.5%
3gbvA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.61 48.0 3.78e-01 100.0% 40.3%
1pf5A00 3.30.1330.40 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › RutC-like 0.60 49.0 4.03e-01 100.0% 47.7%
1irxA01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.60 51.0 3.68e-01 100.0% 63.4%
1e6cA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.60 45.0 3.38e-01 80.9% 84.7%
1j1uA01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.60 51.0 3.72e-01 97.1% 36.7%
6ptzA01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.59 51.0 4.10e-01 94.1% 53.1%
3d0kB00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.59 50.0 3.36e-01 98.5% 33.4%
1np7B01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.59 50.0 4.10e-01 98.5% 55.5%
6uh2A01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.59 49.0 3.53e-01 100.0% 56.1%
3m9wA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.59 46.0 3.64e-01 100.0% 38.3%
2xn1A02 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.59 50.0 3.28e-01 98.5% 24.5%
5ay7B00 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.58 51.0 3.32e-01 100.0% 26.1%
3ojoB02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.58 44.0 3.30e-01 100.0% 30.2%
3emuA00 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.58 44.0 3.47e-01 82.4% 63.9%
3t5tA02 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.58 45.0 3.43e-01 100.0% 33.0%
2hb5A00 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.57 42.0 3.36e-01 80.9% 80.7%
4mh4A02 3.30.300.20 Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain 0.57 48.0 4.30e-01 92.6% 90.4%
7obmA02 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.57 48.0 3.33e-01 100.0% 50.7%
4q34A00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.57 48.0 3.18e-01 100.0% 30.8%
1dnpA01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.56 47.0 3.94e-01 98.5% 53.1%
3lybC00 3.30.1330.40 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › RutC-like 0.55 39.0 3.24e-01 100.0% 38.8%
4u63A01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.55 46.0 3.54e-01 97.1% 78.2%
8fazD01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.54 45.0 3.24e-01 98.5% 29.4%
3bypA00 3.30.70.1350 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Cation efflux protein, cytoplasmic domain 0.53 46.0 4.35e-01 98.5% 82.9%
5ufhA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.53 46.0 3.62e-01 100.0% 63.6%
6ks6E03 3.50.7.10 Alpha Beta › 3-Layer(bba) Sandwich › GroEL › GroEL 0.52 38.0 2.99e-01 79.4% 38.1%
2xryA01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.52 44.0 3.52e-01 98.5% 45.9%
2pt5B00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.52 40.0 3.12e-01 86.8% 58.1%
7nasX01 3.30.300.70 Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › RimP-like superfamily, N-terminal 0.52 43.0 4.17e-01 95.6% 89.9%
3gtzA00 3.30.1330.40 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › RutC-like 0.52 42.0 3.58e-01 94.1% 53.9%
1gm5A05 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.51 44.0 3.39e-01 100.0% 45.1%
1zjcA01 3.40.1830.10 Alpha Beta › 3-Layer(aba) Sandwich › Thermophilic metalloprotease-like › Thermophilic metalloprotease (M29) 0.50 42.0 3.21e-01 98.5% 53.9%
ECOD (88)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4931387 2005.1.1.3 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp 0.72 64.0 4.97e-01 98.5% 55.9%
3450582 2005.1.1.0 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains 0.71 63.0 5.07e-01 98.5% 67.7%
3643738 2005.1.1.0 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains 0.71 61.0 4.49e-01 98.5% 48.4%
3954133 2005.1.1.3 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp 0.71 62.0 4.85e-01 98.5% 53.1%
4951031 2005.1.1.3 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp 0.71 62.0 4.79e-01 98.5% 57.3%
3511076 2005.1.1.36 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › SLC12 0.70 59.0 4.56e-01 100.0% 42.8%
5042296 2005.1.1.3 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp 0.70 61.0 4.92e-01 98.5% 55.2%
3478669 2005.1.1.3 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp 0.70 61.0 4.70e-01 98.5% 57.4%
1406486 2005.1.1.3 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp 0.69 60.0 4.87e-01 98.5% 57.6%
3893084 2002.1.1.30 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_18 0.69 60.0 4.43e-01 100.0% 37.8%
4955705 2005.1.1.0 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains 0.69 62.0 4.84e-01 97.1% 55.6%
384422 2005.1.1.3 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp 0.69 61.0 4.83e-01 98.5% 54.7%
3587708 2002.1.1.101 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Orn_Arg_deC_N 0.69 60.0 4.08e-01 100.0% 27.3%
4276454 2002.1.1.266 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PF27526 0.68 60.0 3.67e-01 100.0% 16.4%
3372663 2005.1.1.3 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp 0.68 61.0 4.87e-01 100.0% 53.3%
4379123 2002.1.1.0 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.68 56.0 3.84e-01 100.0% 25.3%
4932350 2012.1.1.1 ↗ a/b three-layered sandwiches › LigB-like › LigB-like › LigB-like › Memo 0.68 60.0 3.98e-01 100.0% 38.9%
4962917 2005.1.1.3 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp 0.68 57.0 4.58e-01 98.5% 53.8%
4379372 2004.1.1.10 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATP-synt_ab 0.68 60.0 3.81e-01 100.0% 21.2%
3549056 2005.1.1.36 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › SLC12 0.67 54.0 3.96e-01 100.0% 33.3%
4604367 2005.1.1.3 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp 0.67 60.0 4.79e-01 100.0% 51.1%
3650487 2002.1.1.0 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.66 57.0 3.85e-01 100.0% 29.6%
5025630 2005.1.1.3 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp 0.66 56.0 4.44e-01 97.1% 55.2%
4950302 7592.1.1.3 ↗ a/b three-layered sandwiches › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains › DUF6293_N 0.66 52.0 4.05e-01 98.5% 38.7%
4884367 2002.1.1.51 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Alpha_L_fucos 0.66 57.0 3.59e-01 100.0% 22.2%
5027936 2005.1.1.0 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains 0.65 58.0 4.75e-01 98.5% 57.7%
5059591 2005.1.1.3 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp 0.65 55.0 4.45e-01 97.1% 53.6%
3891375 2004.1.1.122 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › IIGP 0.65 57.0 3.86e-01 100.0% 27.5%
4630717 2005.1.1.3 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp 0.65 56.0 4.56e-01 100.0% 57.0%
3890795 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.65 50.0 3.53e-01 82.4% 46.5%
4957491 7523.1.1.0 ↗ a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II 0.65 57.0 4.69e-01 100.0% 83.2%
3183627 2008.1.1.150 ↗ a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › DUF7102 0.65 58.0 4.24e-01 100.0% 38.9%
3288720 2005.1.1.3 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp 0.64 58.0 4.53e-01 100.0% 49.3%
4971716 2005.1.1.0 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains 0.64 55.0 4.39e-01 98.5% 53.8%
3595021 7585.1.1.1 ↗ a/b three-layered sandwiches › Rossmann-like domains in Sec1/munc18-like proteins › Rossmann-like domains in Sec1/munc18-like proteins › Rossmann-like domains in Sec1/munc18-like proteins › Sec1 0.64 57.0 4.13e-01 100.0% 45.3%
3720313 2484.1.1.57 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Ydc2-catalyt 0.64 54.0 3.70e-01 100.0% 25.5%
137824 2003.1.1.3 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › adh_short 0.63 55.0 4.00e-01 100.0% 38.8%
1520986 7523.1.1.4 ↗ a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › SBP_bac_3 0.63 52.0 4.28e-01 94.1% 49.6%
1520985 7523.1.1.4 ↗ a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › SBP_bac_3 0.63 52.0 4.52e-01 94.1% 58.9%
3980781 7523.1.1.4 ↗ a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › SBP_bac_3 0.63 52.0 3.46e-01 94.1% 22.7%
3670671 2005.1.1.3 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp 0.62 53.0 4.24e-01 98.5% 53.8%
5058363 2003.1.10.0 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › PreATP-grasp domain 0.62 48.0 3.99e-01 83.8% 65.8%
4981516 2005.1.1.0 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains 0.62 56.0 4.26e-01 98.5% 51.3%
None — 0.62 49.0 3.32e-01 100.0% 22.2%
3401572 2007.1.2.0 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I 0.62 48.0 3.61e-01 100.0% 32.4%
4947837 2005.1.1.17 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1f 0.62 47.0 3.24e-01 100.0% 21.9%
3405383 2005.1.1.36 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › SLC12 0.62 53.0 3.77e-01 98.5% 36.3%
3187985 2004.1.1.14 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › GTP_EFTU 0.61 54.0 3.60e-01 100.0% 34.9%
5056448 2002.1.1.120 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.61 52.0 3.36e-01 98.5% 23.1%
3173408 2005.1.1.79 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › PF29926 0.61 50.0 3.76e-01 100.0% 41.0%
4932368 2005.1.1.17 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1f 0.61 51.0 3.54e-01 100.0% 70.2%
3949557 2003.1.1.85 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › SpnB_Rossmann 0.60 49.0 3.75e-01 91.2% 45.5%
4994780 2484.1.1.124 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › OrfB_IS605 0.60 52.0 3.71e-01 100.0% 32.1%
4029287 2006.1.4.0 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like 0.60 52.0 3.51e-01 100.0% 27.5%
4931780 2005.1.1.3 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp 0.59 50.0 3.88e-01 100.0% 46.7%
4941648 2484.1.1.302 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Cas12f1-like_TNB 0.59 51.0 3.73e-01 100.0% 35.4%
4277736 2004.1.1.420 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA, TIP49 0.59 50.0 3.69e-01 100.0% 35.0%
3970449 7581.1.1.17 ↗ a/b three-layered sandwiches › Thiolase-like › Thiolase-like › Thiolase-like › DUF2875 0.59 50.0 3.52e-01 100.0% 33.1%
3740404 2004.1.1.1 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA 0.59 52.0 3.96e-01 100.0% 85.6%
5055315 7523.1.1.22 ↗ a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › ABC2_membrane_3 0.59 44.0 3.71e-01 82.4% 49.2%
5053209 2004.1.1.1 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA 0.59 49.0 3.81e-01 98.5% 41.1%
4494002 2003.1.1.20 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Epimerase 0.58 49.0 4.15e-01 98.5% 55.0%
3743644 7585.1.1.1 ↗ a/b three-layered sandwiches › Rossmann-like domains in Sec1/munc18-like proteins › Rossmann-like domains in Sec1/munc18-like proteins › Rossmann-like domains in Sec1/munc18-like proteins › Sec1 0.58 48.0 3.56e-01 100.0% 54.8%
4957483 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.58 43.0 3.04e-01 77.9% 58.5%
None — 0.58 49.0 3.61e-01 100.0% 34.4%
3609528 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.57 49.0 3.58e-01 100.0% 43.9%
5072202 2484.1.1.302 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Cas12f1-like_TNB 0.57 48.0 3.61e-01 100.0% 35.8%
2988294 2004.1.1.50 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Guanylate_kin 0.56 41.0 2.87e-01 75.0% 88.3%
3999521 2485.1.1.45 ↗ a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin_8 0.56 41.0 3.70e-01 80.9% 55.8%
3450222 2004.1.1.1 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA 0.56 46.0 3.51e-01 100.0% 37.1%
4979830 2484.1.1.302 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Cas12f1-like_TNB 0.56 47.0 3.62e-01 98.5% 68.8%
5073006 316.1.1.2 ↗ a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTP_transf_2 0.55 46.0 3.58e-01 95.6% 53.1%
None — 0.55 47.0 3.15e-01 98.5% 30.0%
4222810 327.10.1.2 ↗ a+b two layers › Alpha-lytic protease prodomain-like › Ribosome-binding factor A (RbfA)-related › Ribosome-binding factor A (RbfA)-related › RBFA 0.55 47.0 4.01e-01 98.5% 70.4%
3812516 131.1.1.15 ↗ alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › Ppx-GppA_III 0.54 46.0 3.32e-01 97.1% 71.0%
4631411 2484.1.1.25 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RuvC 0.53 45.0 3.56e-01 100.0% 64.6%
3963128 7516.1.1.0 ↗ a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases 0.53 47.0 3.30e-01 100.0% 32.1%
4938546 2004.1.1.64 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › APS_kinase 0.53 40.0 2.92e-01 80.9% 49.2%
4459358 2008.1.1.6 ↗ a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › UPF0102 0.52 45.0 3.80e-01 98.5% 74.2%
3728107 2004.1.1.60 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SKI 0.52 38.0 2.84e-01 80.9% 28.0%
5050757 2003.1.10.0 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › PreATP-grasp domain 0.52 38.0 3.63e-01 82.4% 67.5%
None — 0.52 45.0 3.03e-01 100.0% 24.3%
4952488 2007.1.3.19 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › DUF116 0.52 42.0 3.20e-01 91.2% 79.8%
4989682 2006.1.4.0 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like 0.52 43.0 3.64e-01 100.0% 63.1%
3296010 2487.1.1.0 ↗ a/b three-layered sandwiches › "The ""swivelling"" beta/beta/alpha domains" › "The ""swivelling"" beta/beta/alpha domain" › "The ""swivelling"" beta/beta/alpha domain" 0.51 41.0 3.20e-01 98.5% 40.0%
3506598 7523.1.1.0 ↗ a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II 0.51 38.0 2.95e-01 83.8% 34.5%
10956 7590.1.1.1 ↗ a/b three-layered sandwiches › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › Peptidase_M29 0.50 42.0 3.21e-01 98.5% 53.6%
3727493 7552.1.1.1 ↗ a/b three-layered sandwiches › Amidase signature (AS) enzymes › Amidase signature (AS) enzymes › Amidase signature (AS) enzymes › Amidase 0.50 44.0 2.64e-01 100.0% 44.9%