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KR296695.1__AKJ73310.1__SP41_21__00021
Bact-VirKR296695.1__AKJ73310.1__SP41_21__00021
Identity
- Accession:
- KR296695 ↗
- Kingdom:
- phage
Quality
81.1
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 95-159
Domain cluster:
rep: collagen_repeat_protein_with_BclB_C-terminal_domain__YP_007354075__Acanthamoeba_polyphaga_moumouvirus__1269028__D377-418_430-470
CATH (15)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4zpjA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.65 | 44.0 | 3.26e-01 | 70.8% | 33.9% |
| 3eafA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.65 | 45.0 | 3.25e-01 | 72.3% | 33.3% |
| 6eufA01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.61 | 42.0 | 2.66e-01 | 70.8% | 16.2% |
| 4geqB00 | 3.30.160.430 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.59 | 33.0 | 3.47e-01 | 89.2% | 56.9% |
| 6igbA00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.57 | 39.0 | 2.53e-01 | 73.8% | 26.2% |
| 4u6bA00 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.57 | 39.0 | 2.49e-01 | 72.3% | 45.5% |
| 1jofA00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.55 | 39.0 | 2.51e-01 | 75.4% | 25.5% |
| 1r5mA00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.55 | 40.0 | 2.58e-01 | 80.0% | 44.7% |
| 3axbA02 | 3.30.9.10 | Alpha Beta › 2-Layer Sandwich › D-Amino Acid Oxidase; Chain A, domain 2 › D-Amino Acid Oxidase, subunit A, domain 2 | 0.54 | 44.0 | 3.39e-01 | 100.0% | 96.1% |
| 2jv8A00 | 3.30.1880.10 | Alpha Beta › 2-Layer Sandwich › protein ne1242 fold › protein ne1242 domain like | 0.54 | 31.0 | 3.01e-01 | 96.9% | 50.7% |
| 2ymaA00 | 3.10.310.60 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › | 0.54 | 32.0 | 2.61e-01 | 73.8% | 27.4% |
| 2e11A00 | 3.60.110.10 | Alpha Beta › 4-Layer Sandwich › Nitrilase/N-carbamoyl-D-aminoacid amidohydrolase › Carbon-nitrogen hydrolase | 0.53 | 45.0 | 3.08e-01 | 100.0% | 84.9% |
| 5c0pA00 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.53 | 36.0 | 2.42e-01 | 70.8% | 35.6% |
| 2mizA00 | 2.60.40.2900 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.52 | 43.0 | 3.27e-01 | 92.3% | 59.0% |
| 4okcA01 | 2.90.10.10 | Mainly Beta › Orthogonal Prism › Agglutinin, subunit A › Bulb-type lectin domain | 0.51 | 33.0 | 3.31e-01 | 90.8% | 62.3% |
ECOD (32)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4025635 | 874.1.1.0 ↗ | a+b duplicates or obligate multimers › Smc hinge domain › Smc hinge domain › Smc hinge domain | 0.67 | 46.0 | 3.32e-01 | 72.3% | 27.1% |
| 3415222 | 391.1.2.3 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › VWC domain-related › SVWC | 0.67 | 46.0 | 4.48e-01 | 70.8% | 88.7% |
| 4221106 | 2006.1.1.2 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like | 0.66 | 46.0 | 3.30e-01 | 72.3% | 36.8% |
| 3401139 | 874.1.1.0 ↗ | a+b duplicates or obligate multimers › Smc hinge domain › Smc hinge domain › Smc hinge domain | 0.66 | 45.0 | 3.13e-01 | 70.8% | 24.9% |
| 3391741 | 391.1.2.0 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › VWC domain-related | 0.65 | 42.0 | 2.94e-01 | 70.8% | 20.6% |
| 2581368 | 391.1.1.0 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module | 0.61 | 36.0 | 4.29e-01 | 75.4% | 97.4% |
| 4969052 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.61 | 42.0 | 2.73e-01 | 73.8% | 60.4% |
| 3538117 | 391.1.2.17 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › VWC domain-related › VWC, VWC2L_2nd | 0.59 | 40.0 | 3.28e-01 | 70.8% | 47.2% |
| 3595243 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.59 | 40.0 | 2.58e-01 | 70.8% | 25.6% |
| 4216416 | 5.1.5.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40 | 0.58 | 41.0 | 2.54e-01 | 75.4% | 19.8% |
| 3413477 | 5.1.5.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40 | 0.57 | 39.0 | 2.55e-01 | 72.3% | 29.6% |
| 4479826 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.57 | 39.0 | 2.55e-01 | 72.3% | 31.0% |
| 3091267 | 5.1.5.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40 | 0.57 | 46.0 | 3.01e-01 | 93.8% | 33.9% |
| 3592141 | 5.1.2.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed | 0.57 | 39.0 | 2.96e-01 | 72.3% | 50.9% |
| 3372793 | 5.1.2.2 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed › WD40 | 0.57 | 39.0 | 3.14e-01 | 72.3% | 72.6% |
| 4969858 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.57 | 39.0 | 2.68e-01 | 72.3% | 38.7% |
| 2773872 | 5.1.5.79 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40, WDR90_beta-prop_4th | 0.56 | 39.0 | 2.50e-01 | 72.3% | 29.2% |
| 3514049 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.55 | 37.0 | 2.45e-01 | 72.3% | 30.5% |
| 5036257 | 244.1.1.4 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C › DAO | 0.54 | 47.0 | 3.68e-01 | 96.9% | 80.0% |
| 3391005 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.54 | 43.0 | 2.75e-01 | 87.7% | 33.5% |
| 5041214 | 244.1.1.4 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C › DAO | 0.54 | 47.0 | 3.64e-01 | 100.0% | 90.7% |
| 3564965 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.54 | 42.0 | 2.44e-01 | 83.1% | 29.7% |
| 3235272 | 5.1.3.9 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › OLF | 0.53 | 37.0 | 2.47e-01 | 72.3% | 50.4% |
| 3596357 | 327.11.2.3 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_6 | 0.53 | 38.0 | 3.17e-01 | 80.0% | 40.8% |
| 3528870 | 391.1.2.13 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › VWC domain-related › Fn1-VW_OTOGL | 0.53 | 39.0 | 3.21e-01 | 78.5% | 53.3% |
| 4317653 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.52 | 37.0 | 2.43e-01 | 76.9% | 81.4% |
| 3536906 | 5.1.3.9 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › OLF | 0.52 | 36.0 | 2.45e-01 | 75.4% | 80.3% |
| 3925482 | 2003.1.3.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › DAO | 0.51 | 43.0 | 2.73e-01 | 100.0% | 58.5% |
| 3614079 | 331.10.2.0 ↗ | a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › Bacterial S-adenosylmethionine decarboxylase | 0.51 | 38.0 | 3.33e-01 | 89.2% | 52.5% |
| 4014861 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.50 | 41.0 | 2.88e-01 | 95.4% | 62.4% |
| 3348430 | 2003.1.2.63 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › GMC_oxred_N, GMC_oxred_C, NAD_binding_8 | 0.50 | 40.0 | 2.55e-01 | 93.8% | 77.7% |
| 3455612 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.50 | 40.0 | 2.56e-01 | 92.3% | 32.0% |
D2
high
residues 189-278