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KR534323.1__AKO61050.1__X__00149
Bact-VirKR534323.1__AKO61050.1__X__00149
Identity
- Accession:
- KR534323 ↗
- Kingdom:
- phage
Quality
71.1
mean pLDDT
Taxonomy
TaxID: 1654919
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-49
Domain cluster:
representative
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3a11B01 | 1.20.120.420 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › translation initiation factor eif-2b, domain 1 | 0.66 | 55.0 | 4.15e-01 | 100.0% | 71.2% |
| 4dgwB01 | 1.10.10.790 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Surp module | 0.65 | 51.0 | 5.07e-01 | 89.4% | 94.0% |
| 2vj4A01 | 1.10.10.2060 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.62 | 47.0 | 3.89e-01 | 85.1% | 65.6% |
| 8g59R01 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.60 | 43.0 | 2.70e-01 | 76.6% | 38.9% |
| 2xheA04 | 1.25.40.60 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.59 | 48.0 | 3.70e-01 | 93.6% | 75.4% |
| 2cobA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.56 | 44.0 | 4.56e-01 | 91.5% | 97.7% |
| 2zxqA06 | 1.20.1270.70 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Designed single chain three-helix bundle | 0.54 | 40.0 | 3.60e-01 | 100.0% | 56.1% |
| 6z01B01 | 1.10.10.41 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Yeast DNA topoisomerase - domain 1 | 0.52 | 40.0 | 3.50e-01 | 89.4% | 83.3% |
| 4jndA02 | 3.60.40.10 | Alpha Beta › 4-Layer Sandwich › Phosphatase 2c; domain 1 › PPM-type phosphatase domain | 0.50 | 38.0 | 2.52e-01 | 97.9% | 57.6% |
ECOD (9)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2474880 | 397.7.1.0 ↗ | few secondary structure elements › Toxic hairpin › Ribosome-inactivating protein luffin P1 › Ribosome-inactivating protein luffin P1 | 0.63 | 37.0 | 3.73e-01 | 95.7% | 55.1% |
| 3497273 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.60 | 51.0 | 3.21e-01 | 100.0% | 52.1% |
| 3730652 | 171.1.1.0 ↗ | alpha arrays › RNase III catalytic domain-like › RNase III catalytic domain-like › RNase III catalytic domain-like | 0.60 | 45.0 | 3.41e-01 | 80.9% | 46.1% |
| 3375611 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.59 | 40.0 | 3.96e-01 | 76.6% | 66.0% |
| 4929144 | 4057.1.1.1 ↗ | alpha arrays › Alpha-helical domain in eukaryotic DNA topoisomerase I, N-terminal DNA-binding fragment › Alpha-helical domain in eukaryotic DNA topoisomerase I, N-terminal DNA-binding fragment › Alpha-helical domain in eukaryotic DNA topoisomerase I, N-terminal DNA-binding fragment › Topoisom_I_N | 0.58 | 42.0 | 3.44e-01 | 76.6% | 44.4% |
| 3597464 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.58 | 47.0 | 4.34e-01 | 89.4% | 98.3% |
| 3993192 | 101.7.1.0 ↗ | alpha arrays › HTH › DEK-C › DEK-C | 0.56 | 40.0 | 3.84e-01 | 76.6% | 65.5% |
| 3737685 | 632.1.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Families 57/38 glycoside transferase middle domain › Families 57/38 glycoside transferase middle domain | 0.54 | 38.0 | 3.09e-01 | 72.3% | 54.7% |
| 2557383 | 1128.1.1.1 ↗ | alpha bundles › LYR protein › LYR protein › LYR protein › Complex1_LYR | 0.52 | 43.0 | 3.18e-01 | 93.6% | 62.6% |