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KR534323.1__AKO61054.1__X__00153
Bact-VirKR534323.1__AKO61054.1__X__00153
Identity
- Accession:
- KR534323 ↗
- Kingdom:
- phage
Quality
92.3
mean pLDDT
Taxonomy
TaxID: 1654919
Cluster
View cluster (3 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 26-109
Domain cluster:
rep: MK268344.1__AZU98217.1__CPT_Munch_273__00273__D1-98
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF02945.22 best | Endonuclease_7 | 41.3 | 1.60e-10 | 90.5% | 69.5% |
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1e7lA01 | 3.40.1800.10 | Alpha Beta › 3-Layer(aba) Sandwich › His-Me finger endonuclease fold › His-Me finger endonucleases | 0.94 | 72.0 | 7.43e-01 | 79.8% | 95.0% |
| 3goxA03 | 3.40.1800.10 | Alpha Beta › 3-Layer(aba) Sandwich › His-Me finger endonuclease fold › His-Me finger endonucleases | 0.66 | 55.0 | 5.61e-01 | 100.0% | 93.8% |
| 5mnjH00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.59 | 36.0 | 3.94e-01 | 76.2% | 78.1% |
| 3k1hA00 | 3.30.1120.180 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › Flagellar FLiS export co-chaperone, HP1076 | 0.55 | 33.0 | 2.97e-01 | 86.9% | 43.5% |
| 4uy8X00 | 2.30.170.40 | Mainly Beta › Roll › Ribosomal Protein L24e; Chain: T; › Ribosomal protein L28/L24 | 0.54 | 38.0 | 3.99e-01 | 73.8% | 90.9% |
| 1xt8A01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.54 | 37.0 | 3.09e-01 | 72.6% | 47.1% |
| 6v93E01 | 3.30.900.10 | Alpha Beta › 2-Layer Sandwich › Cell Cycle, Spindle Assembly Checkpoint Protein; Chain A › HORMA domain | 0.51 | 39.0 | 3.01e-01 | 82.1% | 77.8% |
| 3ialA01 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.50 | 37.0 | 2.58e-01 | 77.4% | 91.1% |
| 4mtdA02 | 3.30.1490.190 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › Ferric-uptake regulator, C-terminal dimerisarion domain | 0.50 | 29.0 | 3.29e-01 | 78.6% | 76.2% |
ECOD (17)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5081423 | 378.1.1.3 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › Endonuclease_7 | 0.75 | 57.0 | 6.00e-01 | 100.0% | 90.5% |
| 4974548 | 378.1.1.0 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases | 0.70 | 48.0 | 5.07e-01 | 71.4% | 97.4% |
| 5076504 | 376.1.1.183 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › Prok-RING_1 | 0.66 | 39.0 | 4.71e-01 | 79.8% | 98.0% |
| 4293536 | 4232.1.1.0 ↗ | few secondary structure elements › Ribosomal protein bL28-related › Ribosomal protein bL28-related › Ribosomal protein L28 | 0.66 | 39.0 | 4.67e-01 | 81.0% | 98.0% |
| 4421975 | 4232.1.1.1 ↗ | few secondary structure elements › Ribosomal protein bL28-related › Ribosomal protein bL28-related › Ribosomal protein L28 › Ribosomal_L28 | 0.64 | 40.0 | 4.69e-01 | 82.1% | 94.5% |
| 4342292 | 4232.1.1.1 ↗ | few secondary structure elements › Ribosomal protein bL28-related › Ribosomal protein bL28-related › Ribosomal protein L28 › Ribosomal_L28 | 0.64 | 38.0 | 4.48e-01 | 77.4% | 90.9% |
| 2628026 | 378.1.1.0 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases | 0.63 | 54.0 | 4.12e-01 | 95.2% | 76.7% |
| 5041606 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.63 | 42.0 | 4.70e-01 | 81.0% | 87.7% |
| 3247148 | 376.1.3.32 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › RH_dom | 0.63 | 47.0 | 4.65e-01 | 78.6% | 94.4% |
| 4012176 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.60 | 48.0 | 4.60e-01 | 86.9% | 74.0% |
| 3286852 | 378.1.1.0 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases | 0.60 | 49.0 | 4.66e-01 | 88.1% | 76.0% |
| 3494950 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.59 | 44.0 | 4.58e-01 | 77.4% | 82.5% |
| 4134779 | 2007.2.5.3 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › Rhodanese/Cell cycle control phosphatase › Rhodanese, Rhodanese_C | 0.59 | 41.0 | 3.04e-01 | 71.4% | 34.8% |
| 3718306 | 376.1.1.37 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › SLX1_C | 0.59 | 48.0 | 4.11e-01 | 86.9% | 56.2% |
| 3499150 | 3954.1.1.1 ↗ | alpha arrays › Phosphodiesterase 4 upstream conserved regions (UCR) › Phosphodiesterase 4 upstream conserved regions (UCR) › Phosphodiesterase 4 upstream conserved regions (UCR) › PDE4_UCR | 0.58 | 31.0 | 2.70e-01 | 70.2% | 34.4% |
| None | — | 0.54 | 43.0 | 3.17e-01 | 90.5% | 77.6% | |
| 5006841 | 103.4.1.0 ↗ | alpha arrays › RuvA-C › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein | 0.50 | 36.0 | 3.12e-01 | 75.0% | 61.5% |