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KR534323.1__AKO61056.1__X__00155

Bact-Vir

KR534323.1__AKO61056.1__X__00155

Identity

Accession:
KR534323 ↗
Kingdom:
phage

Quality

81.6 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Shandongvirus› Pseudoalteromonas_phage_H101

TaxID: 1654919

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-47
PDB
Domain cluster: representative
CATH (26)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1kq1H00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.78 66.0 5.90e-01 100.0% 75.8%
4x9cD00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.77 65.0 5.97e-01 95.6% 75.0%
5o99A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.75 56.0 5.16e-01 82.2% 85.0%
2vb6A01 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.74 51.0 4.84e-01 73.3% 75.9%
3e1sA04 2.30.30.940 Mainly Beta › Roll › SH3 type barrels. › 0.74 64.0 5.55e-01 97.8% 76.8%
3udcA02 2.30.30.60 Mainly Beta › Roll › SH3 type barrels. › 0.74 55.0 5.40e-01 91.1% 76.0%
5i4eA01 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.72 54.0 5.44e-01 82.2% 91.3%
2x4jA01 2.30.30.600 Mainly Beta › Roll › SH3 type barrels. › 0.69 58.0 4.59e-01 100.0% 66.7%
3hfnA00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.69 55.0 5.23e-01 100.0% 81.7%
3hrsA02 2.30.30.90 Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) 0.68 58.0 4.97e-01 100.0% 81.6%
6o5cA02 2.30.30.90 Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) 0.68 58.0 4.98e-01 100.0% 81.6%
2mysA01 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.67 51.0 5.00e-01 84.4% 83.3%
7cfdA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.66 56.0 4.84e-01 100.0% 65.8%
2do3A01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.65 50.0 4.85e-01 86.7% 82.4%
3prbA02 2.40.10.330 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.65 48.0 4.85e-01 84.4% 86.4%
2jrbA00 3.30.250.20 Alpha Beta › 2-Layer Sandwich › Rec A Protein; domain 2 › L1 transposable element, C-terminal domain 0.62 44.0 4.10e-01 100.0% 56.9%
5ighA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.61 48.0 3.98e-01 91.1% 52.3%
3eqeA00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.61 43.0 2.94e-01 73.3% 66.7%
1d8cA02 2.170.170.11 Mainly Beta › Beta Complex › Malate synthase G - maily-beta sub-domain › Malate synthase G - maily-beta sub-domain 0.56 47.0 3.47e-01 100.0% 41.4%
2joiA00 3.30.310.190 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › 0.55 39.0 3.22e-01 100.0% 37.5%
3ne5B01 2.40.420.20 Mainly Beta › Beta Barrel › conserved putative lor/sdh protein from methanococcus maripaludis s2 fold › 0.55 43.0 3.52e-01 88.9% 51.2%
4owkE00 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.54 42.0 3.24e-01 100.0% 88.2%
3na2A00 3.40.1570.20 Alpha Beta › 3-Layer(aba) Sandwich › Heme iron utilization protein-like fold › 0.54 44.0 3.27e-01 100.0% 35.5%
3o6qA02 3.30.70.2720 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.54 41.0 3.15e-01 86.7% 46.5%
2rprA00 2.20.25.240 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › 0.51 40.0 3.46e-01 100.0% 56.3%
8dc1A01 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.50 37.0 2.49e-01 93.3% 57.7%
ECOD (54)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5042477 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.79 61.0 6.17e-01 93.3% 86.7%
4369736 4.1.1.175 ↗ beta barrels › SH3 › SH3 › SH3 › MSSS 0.78 57.0 5.75e-01 88.9% 80.0%
4946165 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.77 61.0 5.80e-01 95.6% 72.7%
5058671 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.76 61.0 5.81e-01 95.6% 74.5%
5060760 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.76 66.0 5.84e-01 97.8% 69.2%
4997767 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.76 60.0 6.01e-01 93.3% 88.9%
4956032 239.1.1.7 ↗ beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › Lhr_WH 0.76 57.0 5.20e-01 84.4% 61.7%
4947995 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.75 61.0 5.74e-01 95.6% 74.5%
4332042 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.75 65.0 5.65e-01 100.0% 68.6%
4950806 4.6.1.8 ↗ beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain › WH_Lhr 0.75 56.0 5.26e-01 84.4% 67.3%
4972872 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.74 51.0 5.13e-01 73.3% 73.3%
4182977 4.1.1.297 ↗ beta barrels › SH3 › SH3 › SH3 › YajC 0.74 58.0 5.41e-01 100.0% 70.0%
5033075 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.73 59.0 5.58e-01 95.6% 74.5%
4952887 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.73 57.0 5.44e-01 93.3% 72.7%
4950396 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.73 58.0 5.45e-01 95.6% 72.7%
3590315 4.1.1.40 ↗ beta barrels › SH3 › SH3 › SH3 › FeoA 0.72 63.0 5.32e-01 100.0% 80.0%
3996278 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.72 60.0 4.42e-01 95.6% 37.5%
2581407 241.14.1.0 ↗ a+b two layers › Type III secretory system chaperone-like › SARS-unique domain-C › SARS-unique domain-C 0.72 51.0 4.29e-01 82.2% 43.6%
4550511 4.1.1.175 ↗ beta barrels › SH3 › SH3 › SH3 › MSSS 0.72 56.0 5.69e-01 100.0% 91.1%
5054597 4.1.1.40 ↗ beta barrels › SH3 › SH3 › SH3 › FeoA 0.71 62.0 5.27e-01 100.0% 80.0%
5050433 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.69 51.0 5.18e-01 100.0% 86.7%
4956395 239.1.1.7 ↗ beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › Lhr_WH 0.69 52.0 5.00e-01 86.7% 98.2%
5018743 4.1.1.40 ↗ beta barrels › SH3 › SH3 › SH3 › FeoA 0.68 59.0 5.02e-01 100.0% 80.0%
2499682 4.1.1.40 ↗ beta barrels › SH3 › SH3 › SH3 › FeoA 0.68 58.0 4.94e-01 100.0% 79.5%
4952478 4.1.1.40 ↗ beta barrels › SH3 › SH3 › SH3 › FeoA 0.67 57.0 4.92e-01 100.0% 82.7%
3885857 223.1.1.0 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains 0.67 50.0 4.18e-01 82.2% 48.0%
5008645 4.1.1.40 ↗ beta barrels › SH3 › SH3 › SH3 › FeoA 0.67 56.0 4.87e-01 100.0% 80.0%
3644563 5.1.4.37 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Nup160 0.66 48.0 2.69e-01 77.8% 16.9%
4971345 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.63 49.0 4.00e-01 100.0% 43.0%
3251994 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.62 50.0 3.75e-01 100.0% 34.1%
3273196 223.2.1.1 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › Profilin 0.62 50.0 3.62e-01 100.0% 32.0%
4000199 3794.1.1.3 ↗ a+b two layers › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Barrel domain in methylcrotonyl-CoA carboxylase alpha-subunit › ACCA_BT 0.61 48.0 4.19e-01 97.8% 85.0%
3487629 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.59 47.0 3.55e-01 100.0% 33.3%
3252765 223.2.1.1 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › Profilin 0.59 47.0 3.56e-01 100.0% 55.6%
4187379 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.59 49.0 3.72e-01 100.0% 60.0%
3992026 708.1.1.4 ↗ beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › FLYWCH 0.59 44.0 3.94e-01 82.2% 67.7%
5073723 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.59 45.0 3.51e-01 100.0% 35.3%
3411391 5.1.12.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › PERK and Ire1 luminal domains 0.59 43.0 2.60e-01 86.7% 9.9%
4946840 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.58 45.0 3.47e-01 100.0% 35.7%
3470353 223.2.1.1 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › Profilin 0.58 48.0 3.60e-01 100.0% 45.3%
3505139 5.1.12.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › PERK and Ire1 luminal domains 0.58 42.0 2.60e-01 80.0% 12.8%
5048945 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.57 47.0 3.55e-01 100.0% 55.2%
3250283 223.2.1.1 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › Profilin 0.57 43.0 3.35e-01 100.0% 33.1%
5052949 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.57 45.0 3.50e-01 100.0% 36.0%
3609150 5.1.3.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.56 40.0 2.45e-01 77.8% 26.1%
5047213 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.56 44.0 3.42e-01 100.0% 35.5%
5075886 243.6.1.1 ↗ a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain › DUF1947 0.55 40.0 3.59e-01 82.2% 88.6%
5048098 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.55 44.0 3.38e-01 100.0% 56.8%
5078711 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.55 43.0 3.40e-01 100.0% 45.8%
5000056 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.55 44.0 3.40e-01 100.0% 59.2%
3223155 207.1.1.81 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH 0.54 37.0 2.37e-01 84.4% 13.4%
3273029 2003.1.2.24 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 0.51 43.0 2.70e-01 97.8% 33.3%
2127448 2003.1.2.69 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › NAD_binding_8, Pyr_redox_3 0.51 36.0 2.63e-01 80.0% 57.1%
5045984 243.6.1.1 ↗ a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain › DUF1947 0.50 38.0 3.26e-01 91.1% 80.0%