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KR816341.1__AKQ06873.1__X__00014
Bact-VirKR816341.1__AKQ06873.1__X__00014
Identity
- Accession:
- KR816341 ↗
- Kingdom:
- phage
Quality
91.9
mean pLDDT
Cluster
View cluster (3 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-67
Domain cluster:
rep: KY653118.1__ARM67923.1__X__00036__D2-63
CATH (18)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4zohA03 | 3.30.365.10 | Alpha Beta › 2-Layer Sandwich › Aldehyde Oxidoreductase; domain 4 › Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain | 0.70 | 46.0 | 4.07e-01 | 95.5% | 47.3% |
| 152lA00 | 1.10.530.40 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.65 | 44.0 | 3.25e-01 | 80.3% | 28.0% |
| 5g5gC03 | 3.30.365.10 | Alpha Beta › 2-Layer Sandwich › Aldehyde Oxidoreductase; domain 4 › Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain | 0.63 | 42.0 | 3.82e-01 | 95.5% | 49.5% |
| 1rm6A01 | 3.30.365.10 | Alpha Beta › 2-Layer Sandwich › Aldehyde Oxidoreductase; domain 4 › Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain | 0.63 | 45.0 | 3.68e-01 | 95.5% | 41.2% |
| 7px0A01 | 3.30.365.10 | Alpha Beta › 2-Layer Sandwich › Aldehyde Oxidoreductase; domain 4 › Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain | 0.62 | 46.0 | 3.77e-01 | 93.9% | 43.3% |
| 2pstX00 | 3.90.820.10 | Alpha Beta › Alpha-Beta Complex › Rubredoxin-like › Structural Genomics, Unknown Function 30-nov-00 1gh9 Mol_id | 0.62 | 44.0 | 4.50e-01 | 83.3% | 80.3% |
| 4gr5C01 | 3.90.820.10 | Alpha Beta › Alpha-Beta Complex › Rubredoxin-like › Structural Genomics, Unknown Function 30-nov-00 1gh9 Mol_id | 0.61 | 42.0 | 4.31e-01 | 83.3% | 76.6% |
| 1mjgM05 | 3.40.1470.10 | Alpha Beta › 3-Layer(aba) Sandwich › Bifunctional carbon monoxide dehydrogenase/acetyl-coa synthase(codh/acs), Chain M, domain 5 › Bifunctional carbon monoxide dehydrogenase/acetyl-coa synthase(codh/acs), Chain M, domain 5 | 0.60 | 50.0 | 4.13e-01 | 98.5% | 64.6% |
| 6l4lA01 | 3.10.310.10 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 | 0.58 | 44.0 | 3.69e-01 | 98.5% | 47.4% |
| 1wjuA00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.57 | 44.0 | 3.95e-01 | 100.0% | 57.0% |
| 1gh9A00 | 3.90.820.10 | Alpha Beta › Alpha-Beta Complex › Rubredoxin-like › Structural Genomics, Unknown Function 30-nov-00 1gh9 Mol_id | 0.56 | 41.0 | 4.06e-01 | 80.3% | 81.7% |
| 4mfzA02 | 3.40.630.120 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › | 0.54 | 47.0 | 3.67e-01 | 100.0% | 95.9% |
| 3h6zA03 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.53 | 45.0 | 3.91e-01 | 100.0% | 66.1% |
| 1wjqA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.53 | 45.0 | 4.36e-01 | 100.0% | 88.5% |
| 2z7bA00 | 3.40.225.10 | Alpha Beta › 3-Layer(aba) Sandwich › L-fuculose-1-phosphate Aldolase › Class II aldolase/adducin N-terminal domain | 0.53 | 37.0 | 2.57e-01 | 74.2% | 72.6% |
| 5u3fA02 | 3.20.10.10 | Alpha Beta › Alpha-Beta Barrel › D-amino Acid Aminotransferase; Chain A, domain 2 › D-amino Acid Aminotransferase, subunit A, domain 2 | 0.53 | 44.0 | 3.30e-01 | 98.5% | 57.8% |
| 4a18O00 | 3.30.390.110 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › | 0.52 | 40.0 | 3.32e-01 | 89.4% | 69.4% |
| 2hw0A00 | 3.40.1310.20 | Alpha Beta › 3-Layer(aba) Sandwich › Replication Protein E1; Chain: A, › | 0.52 | 43.0 | 3.71e-01 | 100.0% | 83.5% |
ECOD (20)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5078006 | 375.1.3.1 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Hypothetical protein MTH1184 › DUF1922 | 0.65 | 50.0 | 4.92e-01 | 83.3% | 85.7% |
| 5041477 | 375.1.3.3 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Hypothetical protein MTH1184 › DUF5817 | 0.63 | 47.0 | 4.89e-01 | 81.8% | 98.3% |
| 5034126 | 375.1.3.3 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Hypothetical protein MTH1184 › DUF5817 | 0.62 | 47.0 | 4.92e-01 | 83.3% | 100.0% |
| 4970821 | 375.1.3.1 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Hypothetical protein MTH1184 › DUF1922 | 0.62 | 47.0 | 4.63e-01 | 83.3% | 84.3% |
| 1833313 | 4076.2.1.1 ↗ | a+b two layers › L9 N-domain-like › MbtH-like › MbtH-like › MbtH | 0.61 | 42.0 | 4.30e-01 | 81.8% | 75.0% |
| 4992153 | 4076.2.1.0 ↗ | a+b two layers › L9 N-domain-like › MbtH-like › MbtH-like | 0.61 | 52.0 | 5.13e-01 | 100.0% | 95.7% |
| 4534058 | 7542.1.1.1 ↗ | a/b three-layered sandwiches › Aconitase iron-sulfur domain › Aconitase iron-sulfur domain › Aconitase iron-sulfur domain › Aconitase | 0.57 | 44.0 | 3.40e-01 | 87.9% | 75.2% |
| 4984616 | 1.1.7.18 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Fucose_iso_C | 0.56 | 47.0 | 3.75e-01 | 95.5% | 59.7% |
| 4138659 | 221.1.1.25 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › APG12 | 0.55 | 43.0 | 3.72e-01 | 100.0% | 52.8% |
| 3932039 | 304.102.1.1 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_2 | 0.54 | 40.0 | 2.71e-01 | 83.3% | 68.9% |
| 3639678 | 192.8.1.59 ↗ | alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain › ATG14 | 0.54 | 38.0 | 2.63e-01 | 75.8% | 60.0% |
| 4137732 | 2008.1.1.100 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › HSDR_N_2 | 0.53 | 40.0 | 3.12e-01 | 98.5% | 36.7% |
| 3917638 | 3409.1.1.3 ↗ | a+b duplicates or obligate multimers › Vacuolar protein sorting-associated protein 30 BARA domain › Vacuolar protein sorting-associated protein 30 BARA domain › Vacuolar protein sorting-associated protein 30 BARA domain › ATG14 | 0.53 | 38.0 | 2.91e-01 | 77.3% | 87.5% |
| 3702924 | 219.1.1.28 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › CHAP | 0.53 | 39.0 | 2.78e-01 | 81.8% | 58.1% |
| 3701883 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.52 | 38.0 | 2.69e-01 | 81.8% | 52.1% |
| 4976139 | 3209.1.1.0 ↗ | a+b two layers › RPL28 › RPL28 › RPL28 | 0.52 | 40.0 | 3.28e-01 | 89.4% | 63.4% |
| 4962034 | 213.1.1.0 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) | 0.52 | 45.0 | 3.55e-01 | 100.0% | 54.5% |
| 4171356 | 2495.1.1.0 ↗ | a/b three-layered sandwiches › Cell-division inhibitor MinC, N-terminal domain › Cell-division inhibitor MinC, N-terminal domain › Cell-division inhibitor MinC, N-terminal domain | 0.51 | 44.0 | 3.82e-01 | 100.0% | 67.3% |
| 1518911 | 4076.2.1.1 ↗ | a+b two layers › L9 N-domain-like › MbtH-like › MbtH-like › MbtH | 0.51 | 42.0 | 4.00e-01 | 98.5% | 77.5% |
| 3622943 | 101.1.2.28 ↗ | alpha arrays › HTH › HTH › winged helix domain › eIF-5_eIF-2B | 0.50 | 37.0 | 3.66e-01 | 93.9% | 72.0% |