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KR902980.1__ALA45874.1__PAC3_8__00008

Bact-Vir

KR902980.1__ALA45874.1__PAC3_8__00008

Identity

Accession:
KR902980 ↗
Kingdom:
phage

Quality

74.7 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Pahexavirus› Propionibacterium_phage_PAC3

TaxID: 1690807

Cluster

View cluster (247 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 39-144
PDB
Domain cluster: representative
CATH (19)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2pp6A02 2.40.10.210 Mainly Beta › Beta Barrel › Thrombin, subunit H › Phage tail proteins (gpFII-like) 0.79 47.0 6.00e-01 99.1% 100.0%
2kz4A00 2.40.10.270 Mainly Beta › Beta Barrel › Thrombin, subunit H › Bacteriophage SPP1 head-tail adaptor protein 0.73 67.0 6.55e-01 100.0% 92.0%
6toaE01 2.40.10.270 Mainly Beta › Beta Barrel › Thrombin, subunit H › Bacteriophage SPP1 head-tail adaptor protein 0.72 62.0 6.46e-01 96.2% 100.0%
3gs9A01 6.20.110.10 Special › Other non-globular › Thrombin, subunit H › 0.70 50.0 5.65e-01 98.1% 100.0%
3f3bA00 2.40.10.370 Mainly Beta › Beta Barrel › Thrombin, subunit H › Protein of unknown function DUF3599 0.70 65.0 6.30e-01 100.0% 94.8%
2p5zX01 2.30.110.50 Mainly Beta › Roll › Pnp Oxidase; Chain A › 0.62 47.0 4.04e-01 98.1% 51.2%
1xzwA01 2.60.40.380 Mainly Beta › Sandwich › Immunoglobulin-like › Purple acid phosphatase-like, N-terminal 0.62 41.0 4.24e-01 70.8% 72.4%
1txkB02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.58 41.0 4.02e-01 72.6% 69.6%
4ba8A00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.58 38.0 3.92e-01 71.7% 69.6%
3hr6A02 2.60.40.740 Mainly Beta › Sandwich › Immunoglobulin-like › 0.57 40.0 3.52e-01 72.6% 73.9%
4f07E00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.54 49.0 4.40e-01 100.0% 77.2%
1b9vA00 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.53 36.0 2.51e-01 71.7% 87.4%
6y1zA01 2.70.170.10 Mainly Beta › Distorted Sandwich › Acetylcholine Binding Protein; Chain: A, › Neurotransmitter-gated ion-channel ligand-binding domain 0.52 46.0 3.68e-01 98.1% 84.0%
2bg9A01 2.70.170.10 Mainly Beta › Distorted Sandwich › Acetylcholine Binding Protein; Chain: A, › Neurotransmitter-gated ion-channel ligand-binding domain 0.52 45.0 3.64e-01 97.2% 83.3%
2j8aA01 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.51 32.0 3.45e-01 82.1% 74.7%
2r39A00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 34.0 3.40e-01 72.6% 65.1%
3gasB02 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.51 46.0 3.98e-01 100.0% 79.2%
2l25A00 3.30.2000.20 Alpha Beta › 2-Layer Sandwich › STM4215-like › 0.51 46.0 4.19e-01 100.0% 90.1%
2hgsA02 3.30.470.20 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain 0.51 40.0 3.96e-01 100.0% 81.1%
ECOD (20)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4032883 1.1.13.3 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_H_T_join 0.75 66.0 6.70e-01 100.0% 95.2%
4034130 1.1.13.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.72 61.0 6.33e-01 100.0% 95.0%
5003311 1.1.13.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.72 65.0 6.50e-01 100.0% 98.2%
3587815 1.1.13.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.65 57.0 5.76e-01 100.0% 94.3%
4949945 1.1.5.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.58 54.0 5.01e-01 100.0% 83.1%
3171619 11.1.1.643 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig-like_POM152 0.58 33.0 3.61e-01 73.6% 65.6%
3537286 11.1.1.2 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 0.58 36.0 3.69e-01 79.2% 63.8%
4944949 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.57 39.0 3.51e-01 72.6% 50.3%
3503759 1.1.5.1 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin 0.57 51.0 3.80e-01 99.1% 87.5%
3507692 1.1.5.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.56 47.0 4.19e-01 100.0% 64.0%
3646691 1.1.5.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.56 51.0 4.31e-01 100.0% 72.9%
3201398 1.1.7.24 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_8 0.55 44.0 4.24e-01 99.1% 75.0%
3250019 1.1.5.56 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Dicty_CAD 0.55 44.0 4.59e-01 100.0% 94.0%
4032562 1.1.13.4 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Sipho_tail 0.54 47.0 4.48e-01 100.0% 98.5%
4341232 220.1.1.127 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_GEF_YEL1 0.53 42.0 3.60e-01 100.0% 54.5%
3389304 11.1.1.2 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 0.52 35.0 3.54e-01 79.2% 68.6%
3576746 1.1.17.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 0.52 43.0 3.67e-01 93.4% 91.4%
4010912 223.1.1.0 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains 0.52 36.0 3.38e-01 100.0% 57.7%
3388199 1.1.5.8 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Putative_PNPOx 0.51 46.0 3.96e-01 100.0% 78.2%
3687001 223.1.1.0 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains 0.51 35.0 3.28e-01 100.0% 54.3%