Back to structures

KR905070.1__ALJ97927.1__iLP1308_35__00035

Bact-Vir

KR905070.1__ALJ97927.1__iLP1308_35__00035

Identity

Accession:
KR905070 ↗
Kingdom:
phage

Quality

69.7 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-51
PDB
Domain cluster: representative
CATH (40)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1r1uB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 51.0 4.17e-01 74.5% 45.2%
5trdA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 49.0 4.19e-01 76.5% 51.2%
5yk4A04 1.10.1420.10 Mainly Alpha › Orthogonal Bundle › MutS, DNA mismatch repair protein; Chain A, domain 3 › 0.68 41.0 3.02e-01 94.1% 22.8%
4a6dA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 40.0 3.24e-01 84.3% 30.9%
2co5A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 50.0 4.15e-01 82.4% 50.0%
2qvoA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 48.0 4.04e-01 78.4% 47.1%
3l09A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 45.0 3.92e-01 74.5% 47.6%
5e1wA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 52.0 3.74e-01 96.1% 31.0%
7txnA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 44.0 3.66e-01 72.5% 46.7%
4asnA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 43.0 3.58e-01 70.6% 41.1%
3cuoD00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.63 43.0 3.57e-01 72.5% 40.4%
3u1nB01 1.10.3210.10 Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 0.62 52.0 3.25e-01 100.0% 65.2%
6uvuA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.61 44.0 3.62e-01 80.4% 41.3%
3sfvB02 6.10.140.2010 Special › Helix non-globular › Helix Hairpins › 0.60 40.0 2.76e-01 100.0% 18.0%
3bpvA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.60 49.0 3.71e-01 96.1% 38.7%
4rs8A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.60 44.0 3.91e-01 84.3% 53.6%
2kloA00 1.10.10.1420 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › DNA replication factor Cdt1, C-terminal WH domain 0.60 44.0 3.32e-01 84.3% 30.4%
3thxB04 1.10.1420.10 Mainly Alpha › Orthogonal Bundle › MutS, DNA mismatch repair protein; Chain A, domain 3 › 0.60 47.0 3.65e-01 92.2% 69.5%
4gyiA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.60 42.0 3.57e-01 76.5% 43.0%
4hw0C00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 47.0 4.11e-01 100.0% 55.9%
2v1nA01 1.10.10.2030 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › DNA/RNA-binding protein Kin17, conserved domain 0.59 43.0 3.50e-01 80.4% 41.6%
4b8xA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 44.0 3.38e-01 88.2% 33.6%
3cjnA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.58 45.0 3.30e-01 88.2% 32.9%
3m8eA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 41.0 3.38e-01 78.4% 38.6%
3e6mA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 43.0 3.23e-01 88.2% 33.6%
3pqkA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 39.0 3.22e-01 72.5% 39.4%
1r1tA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 41.0 3.44e-01 82.4% 42.9%
2rdpA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 45.0 3.46e-01 100.0% 51.4%
4g6tB00 6.10.20.120 Special › Helix non-globular › Arc Repressor Mutant, subunit A › 0.55 42.0 3.83e-01 100.0% 60.6%
6j0eB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.55 37.0 2.97e-01 72.5% 34.2%
1ewqA04 1.10.1420.10 Mainly Alpha › Orthogonal Bundle › MutS, DNA mismatch repair protein; Chain A, domain 3 › 0.55 43.0 3.29e-01 94.1% 69.1%
1go4A00 3.30.900.10 Alpha Beta › 2-Layer Sandwich › Cell Cycle, Spindle Assembly Checkpoint Protein; Chain A › HORMA domain 0.54 36.0 2.48e-01 96.1% 17.9%
1tbxB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 41.0 3.52e-01 86.3% 50.0%
3sfvB01 3.30.450.390 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.53 40.0 3.05e-01 88.2% 78.2%
2fclA00 3.30.460.40 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › 0.53 36.0 2.64e-01 72.5% 25.6%
3oqgA00 3.40.1440.50 Alpha Beta › 3-Layer(aba) Sandwich › GIY-YIG endonuclease › 0.52 46.0 3.18e-01 100.0% 72.2%
4mbsA00 1.20.1070.10 Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins 0.52 41.0 2.62e-01 100.0% 35.0%
1fxkB00 1.10.287.370 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.51 38.0 3.06e-01 100.0% 37.6%
4by6D02 1.25.40.800 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.51 38.0 2.65e-01 90.2% 64.0%
2zdiB00 1.10.287.370 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.50 37.0 3.06e-01 100.0% 40.6%
ECOD (67)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3725361 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.74 55.0 4.53e-01 80.4% 45.6%
5039087 101.1.2.135 alpha arrays › HTH › HTH › winged helix domain › MarR_2 0.72 51.0 4.01e-01 78.4% 36.2%
4988700 101.1.2.14 alpha arrays › HTH › HTH › winged helix domain › HTH_5 0.71 55.0 4.44e-01 86.3% 46.0%
3952925 101.1.2.14 alpha arrays › HTH › HTH › winged helix domain › HTH_5 0.68 47.0 3.92e-01 72.5% 43.3%
4126575 101.1.2.15 alpha arrays › HTH › HTH › winged helix domain › MarR 0.67 52.0 3.85e-01 88.2% 34.5%
3530014 323.1.1.0 a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases 0.66 58.0 3.27e-01 100.0% 76.9%
5029522 101.1.2.14 alpha arrays › HTH › HTH › winged helix domain › HTH_5 0.66 46.0 3.79e-01 78.4% 40.0%
5039585 101.1.2.673 alpha arrays › HTH › HTH › winged helix domain › HTH_HVO_0163_N 0.66 47.0 4.00e-01 78.4% 45.6%
4944376 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.66 48.0 3.77e-01 80.4% 36.5%
5067666 101.1.2.14 alpha arrays › HTH › HTH › winged helix domain › HTH_5 0.65 45.0 3.68e-01 78.4% 38.0%
5021499 101.1.2.650 alpha arrays › HTH › HTH › winged helix domain › DUF7343 0.65 45.0 3.83e-01 74.5% 43.5%
4993511 101.1.2.14 alpha arrays › HTH › HTH › winged helix domain › HTH_5 0.64 44.0 3.67e-01 72.5% 47.8%
5065664 101.1.2.14 alpha arrays › HTH › HTH › winged helix domain › HTH_5 0.64 43.0 3.31e-01 72.5% 31.5%
4973726 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.63 43.0 3.38e-01 72.5% 33.9%
4243508 101.1.2.14 alpha arrays › HTH › HTH › winged helix domain › HTH_5 0.63 50.0 4.06e-01 92.2% 45.7%
4961452 101.1.2.751 alpha arrays › HTH › HTH › winged helix domain › DUF6293_C 0.62 43.0 3.22e-01 72.5% 31.2%
4956538 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.62 42.0 3.72e-01 70.6% 49.3%
4954867 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.62 43.0 3.83e-01 72.5% 50.7%
4993096 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.61 42.0 3.66e-01 72.5% 51.2%
4955611 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.61 44.0 3.60e-01 78.4% 40.4%
5027113 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.61 44.0 3.87e-01 80.4% 50.0%
4966804 101.1.2.530 alpha arrays › HTH › HTH › winged helix domain › HVO_A0114 0.61 44.0 3.78e-01 78.4% 47.1%
4941847 101.1.2.55 alpha arrays › HTH › HTH › winged helix domain › SMC_ScpB 0.61 42.0 3.45e-01 72.5% 40.0%
5044182 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.61 40.0 3.44e-01 70.6% 41.2%
5031078 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.61 46.0 3.94e-01 92.2% 49.0%
5006816 101.1.2.136 alpha arrays › HTH › HTH › winged helix domain › HTH_20 0.61 42.0 3.71e-01 78.4% 47.5%
4941358 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.61 45.0 3.89e-01 88.2% 51.2%
3400082 101.1.2.109 alpha arrays › HTH › HTH › winged helix domain › Rio2_N 0.61 41.0 3.47e-01 74.5% 40.0%
4992529 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.60 42.0 3.51e-01 72.5% 44.4%
5056233 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.60 43.0 3.62e-01 78.4% 43.3%
149370 101.1.2.14 alpha arrays › HTH › HTH › winged helix domain › HTH_5 0.60 50.0 3.95e-01 100.0% 42.9%
3942666 101.1.2.136 alpha arrays › HTH › HTH › winged helix domain › HTH_20 0.60 45.0 3.64e-01 80.4% 48.0%
4250998 101.1.2.309 alpha arrays › HTH › HTH › winged helix domain › GPAT_C 0.60 43.0 3.57e-01 78.4% 42.1%
4939406 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.60 50.0 3.56e-01 100.0% 58.3%
4068860 101.1.2.54 alpha arrays › HTH › HTH › winged helix domain › Penicillinase_R 0.59 48.0 3.81e-01 96.1% 49.2%
4959083 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.59 47.0 3.40e-01 94.1% 57.6%
4947228 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.59 43.0 3.48e-01 78.4% 52.0%
4950303 101.1.2.751 alpha arrays › HTH › HTH › winged helix domain › DUF6293_C 0.59 40.0 3.24e-01 72.5% 36.2%
4951675 101.1.2.530 alpha arrays › HTH › HTH › winged helix domain › HVO_A0114 0.59 45.0 3.68e-01 84.3% 47.0%
4949735 101.1.2.150 alpha arrays › HTH › HTH › winged helix domain › HTH_45 0.59 42.0 3.72e-01 82.4% 50.6%
5035255 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.59 44.0 3.70e-01 82.4% 48.4%
5058358 101.1.2.110 alpha arrays › HTH › HTH › winged helix domain › HTH_IclR 0.58 40.0 3.48e-01 72.5% 48.2%
4999183 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.58 42.0 3.48e-01 78.4% 44.2%
5030252 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.58 43.0 3.64e-01 86.3% 45.0%
5009323 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.57 44.0 3.31e-01 92.2% 33.1%
3979431 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.57 49.0 3.50e-01 96.1% 37.3%
4962681 101.1.2.14 alpha arrays › HTH › HTH › winged helix domain › HTH_5 0.56 40.0 3.32e-01 78.4% 41.1%
3285369 109.4.1.2998 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PF25872 0.56 46.0 2.74e-01 100.0% 62.4%
3587362 101.1.2.15 alpha arrays › HTH › HTH › winged helix domain › MarR 0.56 46.0 3.49e-01 96.1% 36.0%
4928469 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.56 39.0 3.42e-01 72.5% 55.0%
5069901 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.56 43.0 3.68e-01 86.3% 50.0%
4955128 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.56 47.0 3.44e-01 96.1% 38.2%
3603258 101.1.2.14 alpha arrays › HTH › HTH › winged helix domain › HTH_5 0.56 46.0 3.36e-01 98.0% 33.5%
143631 101.1.2.15 alpha arrays › HTH › HTH › winged helix domain › MarR 0.56 45.0 3.38e-01 96.1% 34.2%
5025927 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.55 42.0 3.41e-01 88.2% 40.9%
5051189 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.55 43.0 3.30e-01 88.2% 54.4%
5029366 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.55 40.0 3.48e-01 80.4% 51.8%
5024801 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.54 38.0 2.97e-01 78.4% 33.0%
5030237 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.53 39.0 3.44e-01 80.4% 55.0%
4973217 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.53 38.0 3.35e-01 78.4% 48.2%
4022896 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.53 40.0 2.83e-01 84.3% 24.2%
5038557 101.1.2.934 alpha arrays › HTH › HTH › winged helix domain › HVO_A0261_N 0.53 41.0 3.52e-01 98.0% 52.0%
5013841 101.1.2.14 alpha arrays › HTH › HTH › winged helix domain › HTH_5 0.52 39.0 2.99e-01 84.3% 59.2%
5040398 101.1.2.136 alpha arrays › HTH › HTH › winged helix domain › HTH_20 0.51 39.0 3.22e-01 84.3% 63.2%
4962699 101.1.2.924 alpha arrays › HTH › HTH › winged helix domain › DUF7342 0.50 43.0 3.07e-01 100.0% 57.0%
5035263 101.1.2.14 alpha arrays › HTH › HTH › winged helix domain › HTH_5 0.50 37.0 3.11e-01 86.3% 46.7%
3368548 206.1.1.1 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.50 39.0 2.50e-01 84.3% 25.3%