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KT001912.1__AKU43348.1__CPT_Silence11__00010

Bact-Vir

KT001912.1__AKU43348.1__CPT_Silence11__00010

Identity

Accession:
KT001912 ↗
Kingdom:
phage

Quality

83.3 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Bacillus_phage_Silence

TaxID: 1675599

Cluster

View cluster (9 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-97
PDB
Domain cluster: representative
CATH (8)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3jvoA00 1.10.3230.30 Mainly Alpha › Orthogonal Bundle › Hypothetical protein yqbg › Phage gp6-like head-tail connector protein 0.72 67.0 6.72e-01 100.0% 97.9%
1xn8A00 1.10.3230.10 Mainly Alpha › Orthogonal Bundle › Hypothetical protein yqbg › YqbG-like 0.71 64.0 5.73e-01 98.9% 84.7%
1ghhA00 3.30.910.10 Alpha Beta › 2-Layer Sandwich › Protein Binding, DinI Protein; Chain A › DinI-like 0.57 44.0 4.69e-01 86.3% 97.5%
3e9lA02 1.20.80.40 Mainly Alpha › Up-down Bundle › Acyl-CoA Binding Protein › Prp8 RNase H domain, fingers region 0.54 40.0 4.00e-01 85.3% 75.8%
1r8gA00 3.30.590.20 Alpha Beta › 2-Layer Sandwich › Creatine Kinase; Chain A, domain 2 › 0.53 47.0 3.24e-01 100.0% 65.9%
1zmbA01 3.40.50.1110 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase 0.53 45.0 3.35e-01 94.7% 91.9%
4ol8B03 3.30.70.270 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain 0.52 33.0 3.37e-01 84.2% 64.4%
3hwrA02 1.10.1040.10 Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 0.52 40.0 3.61e-01 82.1% 87.6%
ECOD (14)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3589888 4275.1.1.0 ↗ alpha arrays › Hypothetical protein YqbG-like › Hypothetical protein YqbG-like › Hypothetical protein YqbG-like 0.73 61.0 6.33e-01 97.9% 94.4%
3963507 4275.1.1.1 ↗ alpha arrays › Hypothetical protein YqbG-like › Hypothetical protein YqbG-like › Hypothetical protein YqbG-like › Phage_connect_1 0.73 68.0 6.49e-01 100.0% 96.4%
377920 4275.1.1.1 ↗ alpha arrays › Hypothetical protein YqbG-like › Hypothetical protein YqbG-like › Hypothetical protein YqbG-like › Phage_connect_1 0.73 67.0 6.71e-01 100.0% 96.9%
4031309 4275.1.1.1 ↗ alpha arrays › Hypothetical protein YqbG-like › Hypothetical protein YqbG-like › Hypothetical protein YqbG-like › Phage_connect_1 0.72 64.0 6.55e-01 96.8% 98.9%
3944203 4275.1.1.7 ↗ alpha arrays › Hypothetical protein YqbG-like › Hypothetical protein YqbG-like › Hypothetical protein YqbG-like › Phage_GPL 0.65 60.0 5.40e-01 100.0% 95.4%
3885624 186.1.1.0 ↗ alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N 0.65 37.0 3.47e-01 75.8% 45.0%
4934179 2498.1.1.0 ↗ mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" 0.54 41.0 3.10e-01 82.1% 77.6%
3958907 2003.1.1.0 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains 0.53 47.0 3.37e-01 100.0% 93.4%
3829747 101.1.10.1 ↗ alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N 0.52 44.0 3.80e-01 92.6% 61.3%
5012148 304.4.1.0 ↗ a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel 0.52 39.0 4.04e-01 82.1% 84.4%
3262957 101.1.10.1 ↗ alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N 0.51 43.0 3.93e-01 93.7% 76.2%
3215455 101.1.10.1 ↗ alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N 0.51 43.0 3.66e-01 93.7% 59.4%
3737512 101.1.10.1 ↗ alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N 0.51 43.0 3.70e-01 93.7% 61.3%
3783727 101.1.10.21 ↗ alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N,Cyclin_C 0.50 43.0 3.05e-01 93.7% 56.1%