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KT001912.1__AKU43395.1__CPT_Silence58__00057

Bact-Vir

KT001912.1__AKU43395.1__CPT_Silence58__00057

Identity

Accession:
KT001912 ↗
Kingdom:
phage

Quality

85.5 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 4-60
PDB
Domain cluster: representative
CATH (31)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1e88A03 2.10.70.10 Mainly Beta › Ribbon › Complement Module; domain 1 › Complement Module, domain 1 0.71 37.0 4.22e-01 82.5% 66.7%
1kaxA02 3.30.30.30 Alpha Beta › 2-Layer Sandwich › Defensin A-like › 0.66 38.0 3.93e-01 84.2% 58.2%
2it9A00 2.30.31.10 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A 0.66 49.0 3.77e-01 100.0% 37.5%
1faoA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.65 41.0 3.44e-01 84.2% 36.0%
6gfaA02 3.30.30.30 Alpha Beta › 2-Layer Sandwich › Defensin A-like › 0.65 38.0 3.88e-01 84.2% 58.9%
4oxwA00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.64 48.0 3.92e-01 100.0% 43.4%
3p54A02 3.30.67.10 Alpha Beta › 2-Layer Sandwich › Viral Envelope Glycoprotein; domain 2 › Viral Envelope Glycoprotein, domain 2 0.64 41.0 3.88e-01 94.7% 53.5%
1z9hA01 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.63 55.0 4.95e-01 98.2% 98.8%
4hasA00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.63 47.0 4.02e-01 100.0% 47.1%
2zdiB00 1.10.287.370 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.62 43.0 3.50e-01 98.2% 39.6%
5nr1A01 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.61 54.0 4.42e-01 100.0% 75.5%
2kumA01 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.60 42.0 4.29e-01 98.2% 75.4%
1oxxK03 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.59 42.0 4.58e-01 73.7% 100.0%
4jpbW02 2.40.50.180 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › CheA-289, Domain 4 0.59 45.0 4.14e-01 86.0% 88.6%
6sshA01 3.40.50.11210 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Rap/Ran-GAP 0.58 49.0 3.52e-01 100.0% 68.6%
4e1pA00 3.30.60.230 Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › Lsr2, dimerisation domain 0.57 43.0 4.41e-01 84.2% 85.5%
1fxkB00 1.10.287.370 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.57 40.0 3.26e-01 98.2% 38.5%
6j8yC00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.56 40.0 2.69e-01 78.9% 45.9%
1r7lA00 3.30.2120.10 Alpha Beta › 2-Layer Sandwich › Bacillus phage protein › Bacillus phage protein-like 0.56 37.0 3.11e-01 91.2% 38.8%
1e8oD00 3.30.720.10 Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › Signal recognition particle alu RNA binding heterodimer, srp9/1 0.55 40.0 3.75e-01 100.0% 61.8%
4ntqB00 3.30.2450.20 Alpha Beta › 2-Layer Sandwich › Secreted effector protein pipB2 fold › 0.55 46.0 3.54e-01 100.0% 77.9%
2vqrA01 3.40.720.10 Alpha Beta › 3-Layer(aba) Sandwich › Alkaline Phosphatase, subunit A › Alkaline Phosphatase, subunit A 0.54 41.0 2.52e-01 87.7% 82.9%
3rbtD01 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.54 46.0 3.68e-01 100.0% 65.6%
2incA00 1.10.620.20 Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase, subunit A › Ribonucleotide Reductase, subunit A 0.53 38.0 2.24e-01 75.4% 10.2%
3k6qA02 3.30.160.620 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.53 30.0 2.63e-01 98.2% 34.8%
4v02C00 2.160.20.70 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › 0.53 38.0 2.98e-01 77.2% 41.0%
4m7xA01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.52 35.0 3.08e-01 93.0% 44.0%
2hzmA02 2.20.140.20 Mainly Beta › Single Sheet › q64v53_bacfr protein fold › 0.51 45.0 3.96e-01 100.0% 70.6%
1fxkC00 1.10.287.370 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.51 46.0 3.46e-01 98.2% 48.9%
2wr7C01 3.90.20.10 Alpha Beta › Alpha-Beta Complex › Hemagglutinin Ectodomain; Chain B › 0.50 41.0 2.70e-01 91.2% 99.6%
1n7oA03 2.60.220.10 Mainly Beta › Sandwich › Chondroitinase Ac; Chain A, domain 3 › Polysaccharide lyase family 8-like, C-terminal 0.50 35.0 3.07e-01 75.4% 49.4%
ECOD (54)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3957351 1.1.3.1 beta barrels › cradle loop barrel › RIFT-related › AbrB › MraZ 0.77 68.0 5.14e-01 100.0% 95.6%
4967853 1.1.3.2 beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin 0.74 52.0 5.30e-01 78.9% 78.2%
4076804 3604.1.1.1 a+b two layers › Uncharacterized protein MK0293 C-terminal domain › Uncharacterized protein MK0293 C-terminal domain › Uncharacterized protein MK0293 C-terminal domain › Ni_insertion 0.70 40.0 4.10e-01 77.2% 58.2%
5064574 3604.1.1.1 a+b two layers › Uncharacterized protein MK0293 C-terminal domain › Uncharacterized protein MK0293 C-terminal domain › Uncharacterized protein MK0293 C-terminal domain › Ni_insertion 0.70 40.0 3.95e-01 77.2% 53.3%
4934385 2484.1.1.302 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Cas12f1-like_TNB 0.67 43.0 3.01e-01 100.0% 20.0%
3750184 1170.1.1.1 beta barrels › IL8-related › IL8-related › IL8 › IL8 0.66 44.0 4.04e-01 93.0% 53.3%
4977598 192.2.1.1 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.65 45.0 3.60e-01 98.2% 38.2%
5000498 896.1.1.1 a+b two layers › SRP9/14-like › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Ribosomal_L38e 0.65 44.0 4.42e-01 100.0% 68.3%
3228583 192.2.1.1 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.64 45.0 3.55e-01 98.2% 36.5%
3633449 277.1.1.1 a+b two layers › PX domain › PX domain › PX domain › PX 0.63 48.0 3.50e-01 100.0% 28.2%
3392569 192.2.1.0 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.63 43.0 3.31e-01 98.2% 32.8%
3429387 386.1.1.6 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › ARS2 0.63 39.0 4.28e-01 96.5% 80.0%
3556658 1170.1.1.1 beta barrels › IL8-related › IL8-related › IL8 › IL8 0.62 41.0 3.81e-01 93.0% 53.3%
3907112 1170.1.1.1 beta barrels › IL8-related › IL8-related › IL8 › IL8 0.62 44.0 4.27e-01 100.0% 67.7%
1000517 192.2.1.1 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.62 43.0 3.56e-01 98.2% 41.6%
3831912 376.1.2.2 few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain › C1_2 0.62 49.0 3.86e-01 94.7% 40.8%
3930986 4292.2.1.0 a+b two layers › FlaG-like › MAGUK binding stalk (MBS) domain › MAGUK binding stalk (MBS) domain 0.61 54.0 4.40e-01 100.0% 56.2%
3586018 192.2.1.1 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.61 42.0 3.18e-01 98.2% 30.0%
4995244 192.2.1.1 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.61 42.0 3.35e-01 98.2% 37.3%
5029669 192.2.1.1 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.61 41.0 3.25e-01 98.2% 34.2%
3660613 376.1.2.0 few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain 0.60 46.0 4.85e-01 87.7% 100.0%
4208333 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.59 41.0 3.29e-01 100.0% 35.0%
3648115 277.1.1.1 a+b two layers › PX domain › PX domain › PX domain › PX 0.59 50.0 3.84e-01 100.0% 40.7%
3724159 4952.1.1.2 alpha arrays › L-aspartase N-terminal domain-like › L-aspartase N-terminal domain-like › L-aspartase N-terminal domain-like › Lyase_aromatic 0.59 54.0 3.43e-01 100.0% 24.6%
3234976 192.2.1.1 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.59 41.0 3.33e-01 98.2% 38.2%
3738473 277.1.1.1 a+b two layers › PX domain › PX domain › PX domain › PX 0.59 43.0 3.52e-01 100.0% 39.2%
4946635 309.1.2.1 a+b two layers › LuxS, MPP, ThrRS/AlaRS common domain › LuxS, MPP, ThrRS/AlaRS common domain › ThrRS/AlaRS editing domain › tRNA_SAD 0.59 48.0 3.53e-01 91.2% 94.8%
3282977 300.1.1.12 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › DUF5753 0.59 37.0 2.59e-01 86.0% 19.0%
4934734 2.4.1.1 beta barrels › OB-fold › MOP-like › MOP-like › TOBE 0.58 47.0 3.71e-01 94.7% 100.0%
3264176 214.1.1.1 a+b two layers › SH2 › SH2 › SH2 › SH2 0.58 46.0 3.65e-01 100.0% 40.8%
3859218 304.3.1.0 a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain 0.57 45.0 3.56e-01 87.7% 74.2%
5039029 220.1.1.76 beta barrels › PH domain-like › PH domain-like › PH domain-like › bPH_2 0.57 45.0 3.97e-01 100.0% 57.8%
3709649 277.1.1.0 a+b two layers › PX domain › PX domain › PX domain 0.57 49.0 3.75e-01 100.0% 42.3%
3924975 4.1.1.377 beta barrels › SH3 › SH3 › SH3 › MSL3_chromo-like 0.57 39.0 3.48e-01 98.2% 51.2%
3828336 192.2.1.1 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.57 39.0 3.19e-01 98.2% 36.8%
2485676 292.3.1.1 a+b two layers › RIP/Polo-box domain › TipC soluble domain › TipC soluble domain › TipC 0.56 40.0 2.81e-01 86.0% 23.6%
3237099 207.1.1.81 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH 0.56 36.0 2.47e-01 93.0% 16.8%
3164102 252.2.1.0 a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like 0.55 35.0 3.89e-01 91.2% 84.4%
3516025 220.1.1.1 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.54 43.0 3.66e-01 100.0% 50.5%
3971285 2485.1.1.40 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › GST_N_3 0.54 47.0 3.81e-01 100.0% 71.7%
2834373 101.1.2.14 alpha arrays › HTH › HTH › winged helix domain › HTH_5 0.54 38.0 3.25e-01 77.2% 77.1%
4986319 1.1.3.2 beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin 0.54 39.0 4.03e-01 82.5% 92.0%
4271212 192.2.1.1 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.54 37.0 2.83e-01 77.2% 33.3%
3175837 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.53 45.0 3.41e-01 100.0% 62.7%
3629491 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.53 37.0 3.80e-01 98.2% 81.8%
1489336 207.5.1.1 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Cell-division inhibitor MinC-C › Cell-division inhibitor MinC-C › MinC_C 0.53 38.0 3.01e-01 77.2% 42.4%
5041570 3859.1.1.0 alpha arrays › uncharacterized protein BT_1490 C-terminal domain › uncharacterized protein BT_1490 C-terminal domain › uncharacterized protein BT_1490 C-terminal domain 0.53 42.0 3.29e-01 98.2% 40.8%
3797447 896.1.1.0 a+b two layers › SRP9/14-like › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Signal recognition particle alu RNA binding heterodimer SRP9/14-related 0.52 43.0 3.80e-01 100.0% 68.4%
2980418 210.1.1.1 a+b four layers › Ntn/PP2C › Ntn › Proteasome subunits › Proteasome 0.52 41.0 2.76e-01 87.7% 82.0%
3298201 192.2.1.1 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.52 42.0 3.91e-01 100.0% 71.4%
3774381 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.51 36.0 3.46e-01 96.5% 62.9%
3471318 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.51 35.0 3.09e-01 98.2% 43.0%
3290097 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.50 36.0 3.11e-01 77.2% 52.6%
3714703 1021.1.1.0 a+b two layers › C-terminal domain in RNA helicases › C-terminal domain in RNA helicases › C-terminal domain in RNA helicases 0.50 38.0 3.23e-01 100.0% 48.0%
D2 high residues 70-114
PDB
Domain cluster: representative
CATH (67)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3tgnB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.85 70.0 6.25e-01 100.0% 65.1%
2z99A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.84 73.0 5.84e-01 100.0% 50.6%
3dteA02 1.10.10.1030 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › IrrE, HTH domain 0.83 67.0 6.93e-01 91.1% 100.0%
7ar7E01 1.10.10.1590 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › NADH-quinone oxidoreductase subunit E 0.83 68.0 6.06e-01 91.1% 79.4%
3i71B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.82 59.0 5.38e-01 82.2% 58.6%
5dukB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.82 66.0 5.70e-01 100.0% 58.2%
1s3jA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.81 67.0 6.01e-01 100.0% 65.6%
3gw2A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.80 64.0 5.10e-01 100.0% 44.1%
1le8A00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.80 69.0 6.61e-01 100.0% 86.8%
1ug2A01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.80 67.0 6.53e-01 100.0% 92.3%
2llkA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.80 63.0 6.48e-01 100.0% 97.6%
1b72A00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.79 68.0 6.02e-01 100.0% 67.6%
2vxzA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 64.0 5.73e-01 100.0% 63.6%
3k9tA03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 66.0 5.74e-01 100.0% 62.1%
1akhB00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.79 68.0 5.74e-01 100.0% 62.8%
1sfxB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 65.0 4.98e-01 100.0% 40.4%
2e19A01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.79 67.0 6.66e-01 100.0% 97.9%
3bddD00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 62.0 4.53e-01 100.0% 31.8%
2kt0A01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.78 65.0 6.52e-01 100.0% 100.0%
2x4hA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 69.0 4.90e-01 100.0% 35.7%
2da7A00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.77 66.0 5.77e-01 100.0% 64.8%
2dn0A00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.77 65.0 5.56e-01 100.0% 60.5%
1rr7A02 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.77 59.0 5.88e-01 100.0% 81.2%
4ijaA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 62.0 5.67e-01 100.0% 66.7%
4ha8A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 66.0 5.98e-01 100.0% 71.4%
1x2nA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.76 65.0 6.02e-01 100.0% 81.7%
2da3A01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.76 65.0 6.42e-01 100.0% 97.9%
2jt1A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 63.0 5.58e-01 100.0% 69.0%
8e9gE01 1.10.10.1590 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › NADH-quinone oxidoreductase subunit E 0.75 58.0 5.29e-01 88.9% 65.1%
1c0wA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 67.0 5.68e-01 100.0% 63.0%
2w9zA01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.75 66.0 4.70e-01 100.0% 42.1%
2rn7A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 62.0 5.61e-01 100.0% 74.2%
2h09A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 64.0 5.56e-01 100.0% 64.8%
5zr6A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 61.0 5.58e-01 93.3% 76.3%
2ys9A00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.73 62.0 5.40e-01 97.8% 62.9%
1on2A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 63.0 5.46e-01 100.0% 63.9%
2oap202 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.73 57.0 3.47e-01 86.7% 78.0%
2ld5A00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.72 61.0 5.47e-01 100.0% 68.7%
1ku3A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 62.0 5.67e-01 100.0% 73.8%
1fc3B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 60.0 4.73e-01 100.0% 54.5%
1in4A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 60.0 5.17e-01 100.0% 63.0%
1lfuP00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.70 57.0 4.88e-01 100.0% 59.8%
4fcyA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.70 57.0 4.94e-01 100.0% 61.5%
2y75A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 55.0 4.22e-01 100.0% 36.8%
2v3cC03 1.10.260.30 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › Signal recognition particle, SRP54 subunit, M-domain 0.69 57.0 4.61e-01 100.0% 66.3%
3lsgA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.68 57.0 5.44e-01 100.0% 83.6%
5k7fA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.67 50.0 5.19e-01 84.4% 95.1%
3t0yA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 58.0 5.32e-01 100.0% 75.0%
2hyjA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.66 52.0 5.24e-01 88.9% 91.3%
3f0cA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.65 53.0 5.23e-01 100.0% 91.8%
3mvpA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.65 49.0 4.89e-01 88.9% 85.1%
2raeA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.64 49.0 5.00e-01 91.1% 93.0%
2zb9A01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.64 55.0 5.35e-01 100.0% 90.0%
6el2B01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.64 49.0 4.91e-01 95.6% 100.0%
2oi8A00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.63 49.0 3.40e-01 100.0% 23.6%
3mklA00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.63 52.0 4.06e-01 97.8% 44.2%
2r1jL00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.63 45.0 4.05e-01 84.4% 53.0%
1cxsA02 3.40.228.10 Alpha Beta › 3-Layer(aba) Sandwich › Dimethylsulfoxide Reductase; domain 2 › Dimethylsulfoxide Reductase, domain 2 0.62 52.0 3.32e-01 100.0% 54.1%
2id3A01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.62 49.0 4.80e-01 95.6% 83.7%
7ml0M01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.61 50.0 4.23e-01 97.8% 98.8%
2fd5A01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.60 45.0 4.50e-01 91.1% 81.2%
1neqA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.57 43.0 3.79e-01 88.9% 73.0%
4iv6B01 1.10.540.10 Mainly Alpha › Orthogonal Bundle › Butyryl-Coa Dehydrogenase, subunit A; domain 1 › Acyl-CoA dehydrogenase/oxidase, N-terminal domain 0.56 44.0 3.51e-01 100.0% 69.8%
1tuoA03 3.40.120.10 Alpha Beta › 3-Layer(aba) Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 3 › Alpha-D-Glucose-1,6-Bisphosphate, subunit A, domain 3 0.54 40.0 3.13e-01 86.7% 88.0%
1r4aE00 1.10.220.60 Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › GRIP domain 0.53 42.0 4.08e-01 100.0% 76.5%
3u3wA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.53 43.0 3.89e-01 100.0% 87.0%
2dbhA01 1.10.533.10 Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas 0.50 34.0 3.11e-01 80.0% 54.4%
ECOD (89)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3629014 101.1.1.250 alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-binding_2 0.86 75.0 6.84e-01 100.0% 78.3%
4016103 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.84 74.0 7.21e-01 100.0% 90.0%
4949368 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.84 73.0 6.84e-01 97.8% 85.5%
5050345 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.84 68.0 5.34e-01 100.0% 43.2%
3777065 101.1.1.89 alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-binding_7 0.84 72.0 6.49e-01 100.0% 70.3%
4939640 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.84 72.0 6.58e-01 100.0% 73.3%
4983993 101.1.3.0 alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.83 74.0 6.71e-01 100.0% 78.3%
4928805 101.1.2.233 alpha arrays › HTH › HTH › winged helix domain › NirdL-like_HTH 0.83 73.0 6.16e-01 100.0% 61.3%
3707222 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.83 73.0 6.87e-01 100.0% 87.3%
3424245 101.1.1.269 alpha arrays › HTH › HTH › Three-helical HTH › DUF7769 0.83 71.0 6.50e-01 100.0% 81.7%
4026249 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.82 72.0 6.53e-01 97.8% 73.3%
3411217 101.1.1.319 alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-binding, Myb_DNA-binding_2 0.82 71.0 4.84e-01 100.0% 27.9%
185183 223.1.1.0 a+b three layers › Profilin-like › sensor domains › sensor domains 0.82 67.0 4.87e-01 93.3% 52.3%
3454275 101.1.1.1 alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain 0.82 71.0 6.92e-01 100.0% 92.0%
3262509 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.82 71.0 5.68e-01 100.0% 54.4%
3574083 101.1.1.1 alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain 0.82 67.0 6.78e-01 93.3% 95.6%
5072472 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.81 67.0 5.90e-01 100.0% 63.1%
3693602 3541.1.1.2 beta sandwiches › Atg29-Atg31 › Atg29-Atg31 › Atg29-Atg31 › ATG29_N 0.81 71.0 5.79e-01 100.0% 52.9%
3844546 101.1.1.1 alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain 0.81 71.0 6.14e-01 100.0% 65.7%
4068007 101.1.2.233 alpha arrays › HTH › HTH › winged helix domain › NirdL-like_HTH 0.81 70.0 6.10e-01 100.0% 65.7%
3878498 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.81 70.0 6.59e-01 100.0% 83.6%
4944767 101.1.2.883 alpha arrays › HTH › HTH › winged helix domain › Radical_SAM 0.81 69.0 5.90e-01 100.0% 60.0%
3815398 101.1.1.253 alpha arrays › HTH › HTH › Three-helical HTH › HTH_CLF_N 0.80 67.0 5.25e-01 100.0% 44.0%
4983657 101.1.2.948 alpha arrays › HTH › HTH › winged helix domain › PF27297 0.80 69.0 5.22e-01 100.0% 40.9%
3798210 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.79 68.0 6.64e-01 100.0% 98.0%
3972621 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.79 64.0 6.06e-01 91.1% 80.0%
3343813 101.1.1.36 alpha arrays › HTH › HTH › Three-helical HTH › Homeobox_KN 0.79 68.0 6.10e-01 100.0% 75.4%
3694221 101.1.1.36 alpha arrays › HTH › HTH › Three-helical HTH › Homeobox_KN 0.79 67.0 6.22e-01 100.0% 81.7%
3466087 101.1.1.253 alpha arrays › HTH › HTH › Three-helical HTH › HTH_CLF_N 0.79 65.0 6.36e-01 100.0% 88.0%
3911740 101.1.1.36 alpha arrays › HTH › HTH › Three-helical HTH › Homeobox_KN 0.79 68.0 6.39e-01 100.0% 89.1%
4998317 2004.1.1.73 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MMR_HSR1 0.78 64.0 4.08e-01 100.0% 18.3%
3710980 101.35.1.0 alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX 0.77 61.0 6.15e-01 91.1% 97.8%
4968637 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.77 64.0 5.49e-01 100.0% 58.6%
4995688 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.77 66.0 6.20e-01 97.8% 85.5%
2511579 101.1.2.136 alpha arrays › HTH › HTH › winged helix domain › HTH_20 0.77 66.0 5.32e-01 100.0% 50.0%
3863299 101.1.1.1 alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain 0.77 65.0 5.72e-01 100.0% 65.7%
3650286 101.1.2.454 alpha arrays › HTH › HTH › winged helix domain › FAM91_N 0.77 63.0 6.08e-01 100.0% 80.0%
3470203 101.1.1.36 alpha arrays › HTH › HTH › Three-helical HTH › Homeobox_KN 0.77 66.0 6.23e-01 100.0% 90.9%
4309654 101.1.1.13 alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_1 0.77 62.0 5.83e-01 100.0% 74.5%
3660305 101.1.1.253 alpha arrays › HTH › HTH › Three-helical HTH › HTH_CLF_N 0.76 62.0 6.12e-01 100.0% 88.0%
5006369 101.1.2.233 alpha arrays › HTH › HTH › winged helix domain › NirdL-like_HTH 0.76 62.0 5.56e-01 100.0% 64.6%
3271882 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.76 67.0 5.25e-01 100.0% 48.4%
1316682 101.1.2.233 alpha arrays › HTH › HTH › winged helix domain › NirdL-like_HTH 0.76 63.0 5.81e-01 97.8% 73.8%
3825697 101.1.1.253 alpha arrays › HTH › HTH › Three-helical HTH › HTH_CLF_N 0.75 62.0 5.96e-01 100.0% 81.8%
4976486 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.75 65.0 5.99e-01 100.0% 75.0%
3244508 101.1.1.1 alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain 0.75 63.0 5.83e-01 100.0% 75.0%
4982934 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.74 66.0 6.02e-01 100.0% 75.0%
3754779 101.1.2.36 alpha arrays › HTH › HTH › winged helix domain › z-alpha 0.74 67.0 5.18e-01 100.0% 48.4%
3759994 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.74 61.0 5.80e-01 97.8% 81.8%
3943304 101.1.6.16 alpha arrays › HTH › HTH › TrpR › HTH_22 0.74 61.0 5.02e-01 100.0% 51.1%
4948834 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.74 60.0 6.07e-01 100.0% 100.0%
3283752 101.1.1.13 alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_1 0.74 64.0 5.07e-01 100.0% 51.6%
4216701 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.73 62.0 6.03e-01 97.8% 88.0%
3365751 101.1.1.253 alpha arrays › HTH › HTH › Three-helical HTH › HTH_CLF_N 0.73 61.0 5.51e-01 100.0% 69.2%
3340398 101.1.1.253 alpha arrays › HTH › HTH › Three-helical HTH › HTH_CLF_N 0.73 61.0 4.46e-01 100.0% 33.3%
3978422 101.1.1.2 alpha arrays › HTH › HTH › Three-helical HTH › HTH_AraC 0.73 61.0 5.82e-01 100.0% 81.8%
4008367 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.73 61.0 5.79e-01 97.8% 81.8%
3591036 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.72 60.0 5.72e-01 100.0% 80.0%
4121950 101.1.1.2 alpha arrays › HTH › HTH › Three-helical HTH › HTH_AraC 0.72 59.0 5.65e-01 97.8% 83.6%
4158455 101.1.2.464 alpha arrays › HTH › HTH › winged helix domain › HTH_AraC 0.72 59.0 5.98e-01 100.0% 97.8%
3663639 101.1.1.30 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r3,Sigma70_r4 0.72 62.0 4.21e-01 100.0% 26.6%
4861506 101.1.2.21 alpha arrays › HTH › HTH › winged helix domain › Fe_dep_repress 0.71 60.0 5.63e-01 100.0% 77.6%
4540842 101.1.1.2 alpha arrays › HTH › HTH › Three-helical HTH › HTH_AraC 0.71 60.0 4.09e-01 100.0% 25.9%
3993019 101.1.1.1 alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain 0.71 60.0 5.54e-01 100.0% 88.3%
3967719 101.1.1.18 alpha arrays › HTH › HTH › Three-helical HTH › HTH_8 0.71 56.0 5.45e-01 97.8% 80.0%
3243454 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.71 60.0 5.57e-01 100.0% 80.0%
3987774 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.71 60.0 5.73e-01 100.0% 81.8%
4031726 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.71 59.0 5.83e-01 100.0% 90.0%
None 0.71 57.0 4.55e-01 97.8% 43.0%
3947986 101.1.1.63 alpha arrays › HTH › HTH › Three-helical HTH › HTH_28 0.70 59.0 5.48e-01 100.0% 76.7%
3590374 101.1.1.2 alpha arrays › HTH › HTH › Three-helical HTH › HTH_AraC 0.70 59.0 5.58e-01 100.0% 80.0%
3982082 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.70 57.0 5.46e-01 100.0% 80.0%
3946840 101.1.1.5 alpha arrays › HTH › HTH › Three-helical HTH › TetR_N 0.70 57.0 5.71e-01 100.0% 97.8%
4627768 101.1.2.786 alpha arrays › HTH › HTH › winged helix domain › HTH_Tnp_1 0.69 53.0 5.54e-01 91.1% 97.5%
4442301 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.69 58.0 5.72e-01 100.0% 90.0%
4384171 101.35.1.1 alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX › RecX_HTH2 0.69 56.0 5.62e-01 100.0% 100.0%
3361064 101.1.1.20 alpha arrays › HTH › HTH › Three-helical HTH › CPSF_A 0.69 56.0 4.71e-01 100.0% 93.2%
3974513 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.67 53.0 5.37e-01 97.8% 95.6%
4158504 101.35.1.0 alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX 0.67 54.0 5.40e-01 100.0% 100.0%
3289320 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.67 55.0 5.28e-01 100.0% 81.8%
3724162 101.1.1.216 alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-bind_8 0.67 57.0 5.71e-01 91.1% 95.6%
3943601 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.67 55.0 5.29e-01 100.0% 81.8%
5040824 2003.1.1.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains 0.65 39.0 2.67e-01 71.1% 17.5%
3691115 101.1.17.0 alpha arrays › HTH › HTH › FF domain 0.63 51.0 5.12e-01 91.1% 100.0%
3285523 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.63 48.0 4.55e-01 93.3% 75.0%
4151588 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.63 50.0 4.91e-01 95.6% 100.0%
3784421 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.62 50.0 4.26e-01 100.0% 56.5%
3967101 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.61 51.0 4.84e-01 100.0% 94.5%
4560539 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.58 47.0 4.67e-01 97.8% 88.0%