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KT001913.1__AKU43428.1__CPT_Sansa24__00024
Bact-VirKT001913.1__AKU43428.1__CPT_Sansa24__00024
Identity
- Accession:
- KT001913 ↗
- Kingdom:
- phage
Quality
48.4
mean pLDDT
Taxonomy
TaxID: 1675600
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 18-84
D2
medium
residues 171-230
Domain cluster:
representative
CATH (15)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1tfkB00 | 1.20.120.650 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Colicin D | 0.68 | 47.0 | 4.23e-01 | 73.3% | 91.9% |
| 4fjvA02 | 1.20.1300.20 | Mainly Alpha › Up-down Bundle › 3 helical TM bundles of succinate and fumarate reductases › Peptidase C65 Otubain, subdomain 2 | 0.66 | 52.0 | 3.98e-01 | 86.7% | 91.7% |
| 4ceiA03 | 6.10.250.2380 | Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.64 | 53.0 | 4.36e-01 | 93.3% | 78.6% |
| 3rguB00 | 1.20.5.420 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C | 0.63 | 46.0 | 4.14e-01 | 80.0% | 88.5% |
| 2z16B01 | 1.20.91.10 | Mainly Alpha › Up-down Bundle › Influenza Virus Matrix Protein; Chain A, domain 1 › Influenza matrix M1, N-terminal subdomain 1 | 0.63 | 50.0 | 4.70e-01 | 91.7% | 92.3% |
| 1bw6A00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.62 | 36.0 | 3.75e-01 | 90.0% | 58.9% |
| 2qqpD00 | 6.10.140.650 | Special › Helix non-globular › Helix Hairpins › | 0.61 | 34.0 | 4.03e-01 | 90.0% | 82.5% |
| 3i2fA02 | 1.10.3020.10 | Mainly Alpha › Orthogonal Bundle › alpha-amino acid ester hydrolase ( Helical cap domain) › alpha-amino acid ester hydrolase ( Helical cap domain) | 0.59 | 47.0 | 4.13e-01 | 90.0% | 70.5% |
| 2aaaA01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.53 | 37.0 | 2.28e-01 | 73.3% | 84.0% |
| 2qgnA02 | 1.10.287.890 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain | 0.53 | 35.0 | 3.29e-01 | 70.0% | 81.7% |
| 1fc6A01 | 3.30.750.44 | Alpha Beta › 2-Layer Sandwich › Transcription Regulator spoIIAA › | 0.52 | 39.0 | 3.43e-01 | 83.3% | 92.9% |
| 2b5dX01 | 3.20.110.10 | Alpha Beta › Alpha-Beta Barrel › 7-stranded beta/alpha barrel › Glycoside hydrolase 38, N terminal domain | 0.52 | 44.0 | 2.74e-01 | 100.0% | 79.7% |
| 3i5pA03 | 1.20.120.1880 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleoporin, helical C-terminal domain | 0.52 | 41.0 | 2.78e-01 | 90.0% | 27.5% |
| 1yawB02 | 3.90.650.10 | Alpha Beta › Alpha-Beta Complex › Phosphoribosyl-aminoimidazole Synthetase; Chain A, domain 2 › PurM-like C-terminal domain | 0.51 | 41.0 | 3.23e-01 | 100.0% | 80.0% |
| 3g0oA02 | 1.10.1040.10 | Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 | 0.50 | 45.0 | 3.55e-01 | 100.0% | 77.7% |
ECOD (13)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3488978 | 4177.1.1.0 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like | 0.69 | 48.0 | 3.06e-01 | 73.3% | 73.8% |
| 3493924 | 4177.1.1.1 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › FCH | 0.68 | 46.0 | 3.02e-01 | 71.7% | 73.3% |
| 4968502 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.68 | 49.0 | 4.97e-01 | 78.3% | 88.3% |
| 3877511 | 213.1.1.15 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Gly_acyl_tr_N | 0.66 | 48.0 | 3.84e-01 | 78.3% | 67.2% |
| 3930333 | 5001.1.1.0 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like | 0.66 | 53.0 | 3.44e-01 | 88.3% | 88.7% |
| 3914650 | 213.1.1.15 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Gly_acyl_tr_N | 0.65 | 50.0 | 3.89e-01 | 83.3% | 68.5% |
| 3474037 | 150.1.1.36 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin › Otopetrin | 0.62 | 54.0 | 3.65e-01 | 100.0% | 71.7% |
| 3978007 | 3755.3.1.15 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › MscS_porin | 0.60 | 50.0 | 3.94e-01 | 95.0% | 83.8% |
| 314012 | 4254.1.1.1 ↗ | alpha arrays › YoaC-like › YoaC-like › YoaC-like › DUF1889 | 0.57 | 46.0 | 3.80e-01 | 90.0% | 60.2% |
| 1120525 | 109.26.1.1 ↗ | alpha superhelices › Repetitive alpha hairpins › Nuclear pore complex component Nup133/Nup170/Nup157 C-terminal domains › Nuclear pore complex component Nup133/Nup170/Nup157 C-terminal domains › Nucleoporin_C | 0.56 | 47.0 | 3.21e-01 | 100.0% | 29.8% |
| 3198319 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.53 | 44.0 | 2.74e-01 | 91.7% | 69.9% |
| 4648077 | 2006.1.6.38 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › DUF444 | 0.53 | 43.0 | 2.88e-01 | 93.3% | 44.4% |
| 5076042 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.52 | 42.0 | 3.46e-01 | 93.3% | 69.2% |
D3
medium
residues 314-379