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KT001913.1__AKU43499.1__CPT_Sansa95__00095
Bact-VirKT001913.1__AKU43499.1__CPT_Sansa95__00095
Identity
- Accession:
- KT001913 ↗
- Kingdom:
- phage
Quality
87.7
mean pLDDT
Taxonomy
TaxID: 1675600
Cluster
View cluster (25 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 20-170
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF17289.9 best | Terminase_6C | 31.1 | 3.20e-07 | 95.4% | 99.4% |
CATH (29)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5m1pB00 | 3.30.420.240 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › | 0.83 | 78.0 | 7.16e-01 | 99.3% | 83.1% |
| 4dkwA00 | 3.30.420.280 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › | 0.82 | 77.0 | 7.02e-01 | 99.3% | 83.5% |
| 4ifeA02 | 3.30.420.240 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › | 0.82 | 76.0 | 6.54e-01 | 98.0% | 89.0% |
| 2wbnA00 | 3.30.420.280 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › | 0.78 | 73.0 | 6.87e-01 | 100.0% | 87.6% |
| 3bzcA03 | 3.30.420.140 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › YqgF/RNase H-like domain | 0.75 | 61.0 | 6.60e-01 | 98.0% | 100.0% |
| 3kksB00 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.63 | 44.0 | 4.44e-01 | 84.1% | 70.4% |
| 2f9wA01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.63 | 51.0 | 5.47e-01 | 98.0% | 100.0% |
| 2kpoA00 | 3.40.50.11230 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.60 | 39.0 | 4.45e-01 | 98.7% | 90.0% |
| 2x6nD00 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.59 | 48.0 | 4.57e-01 | 86.8% | 100.0% |
| 1pdoA00 | 3.40.50.510 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphotransferase system, mannose-type IIA component | 0.58 | 39.0 | 4.20e-01 | 99.3% | 79.8% |
| 4h0fA02 | 3.40.50.1980 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain | 0.58 | 40.0 | 4.53e-01 | 100.0% | 97.2% |
| 1pq4A02 | 3.40.50.1980 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain | 0.58 | 38.0 | 4.39e-01 | 100.0% | 96.1% |
| 5w56B02 | 3.40.50.1980 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain | 0.57 | 40.0 | 4.34e-01 | 100.0% | 85.9% |
| 3ujpA02 | 3.40.50.1980 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain | 0.57 | 41.0 | 4.55e-01 | 100.0% | 97.4% |
| 4fi3F02 | 3.40.50.1980 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain | 0.55 | 39.0 | 4.24e-01 | 99.3% | 88.1% |
| 1eepA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.54 | 42.0 | 3.32e-01 | 82.8% | 73.6% |
| 3bg3A02 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.54 | 44.0 | 3.51e-01 | 89.4% | 96.9% |
| 1i39A01 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.53 | 44.0 | 4.38e-01 | 88.1% | 99.4% |
| 1rqeA01 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.52 | 41.0 | 3.39e-01 | 83.4% | 83.5% |
| 5e7qA01 | 3.40.50.12780 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › ANL, N-terminal domain | 0.51 | 42.0 | 3.15e-01 | 89.4% | 51.7% |
| 1gsoA01 | 3.40.50.20 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.51 | 32.0 | 3.89e-01 | 82.1% | 100.0% |
| 1ofuX00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.51 | 36.0 | 4.03e-01 | 84.8% | 93.2% |
| 3ve9A00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.51 | 38.0 | 3.50e-01 | 78.8% | 91.2% |
| 3n0wA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.51 | 38.0 | 4.07e-01 | 97.4% | 87.9% |
| 3etcA01 | 3.40.50.12780 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › ANL, N-terminal domain | 0.51 | 42.0 | 3.03e-01 | 89.4% | 42.8% |
| 3zy2A02 | 3.40.50.11350 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.50 | 42.0 | 4.12e-01 | 94.0% | 80.7% |
| 3ni2A01 | 3.40.50.12780 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › ANL, N-terminal domain | 0.50 | 43.0 | 3.08e-01 | 90.7% | 43.1% |
| 4ecmA00 | 3.90.550.10 | Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 0.50 | 44.0 | 3.72e-01 | 94.0% | 81.6% |
| 4ldaB00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.50 | 37.0 | 3.94e-01 | 100.0% | 89.8% |
ECOD (54)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2877581 | 2484.1.1.95 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Terminase-T7_RNaseH-like | 0.87 | 83.0 | 6.72e-01 | 100.0% | 66.9% |
| 5002634 | 2484.1.1.77 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Terminase_6C | 0.86 | 83.0 | 7.70e-01 | 100.0% | 83.9% |
| 4972935 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.86 | 82.0 | 7.67e-01 | 100.0% | 86.7% |
| 4975080 | 2484.1.1.77 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Terminase_6C | 0.86 | 82.0 | 7.53e-01 | 100.0% | 84.3% |
| 4974990 | 2484.1.1.77 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Terminase_6C | 0.85 | 81.0 | 7.64e-01 | 100.0% | 89.1% |
| 3964372 | 2484.1.1.77 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Terminase_6C | 0.85 | 80.0 | 7.27e-01 | 100.0% | 80.5% |
| 5083931 | 2484.1.1.77 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Terminase_6C | 0.83 | 79.0 | 7.51e-01 | 100.0% | 89.7% |
| 5031052 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.83 | 79.0 | 7.01e-01 | 100.0% | 81.5% |
| 1695398 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.82 | 77.0 | 6.58e-01 | 98.7% | 89.6% |
| 3164493 | 2484.1.1.76 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Terminase_3C | 0.82 | 77.0 | 6.63e-01 | 98.7% | 88.9% |
| 185684 | 2484.1.1.77 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Terminase_6C | 0.82 | 77.0 | 7.02e-01 | 99.3% | 83.5% |
| 4988089 | 2484.1.1.77 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Terminase_6C | 0.81 | 77.0 | 7.03e-01 | 99.3% | 87.9% |
| 4954544 | 2484.1.1.77 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Terminase_6C | 0.81 | 77.0 | 7.03e-01 | 100.0% | 85.3% |
| 4975081 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.80 | 72.0 | 7.19e-01 | 96.0% | 92.3% |
| 134144 | 2484.1.1.76 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Terminase_3C | 0.78 | 73.0 | 6.87e-01 | 100.0% | 87.6% |
| 3958788 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.72 | 49.0 | 5.71e-01 | 97.4% | 95.5% |
| 2623870 | 2484.1.1.44 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Pox_A22 | 0.70 | 64.0 | 6.44e-01 | 98.7% | 98.0% |
| 4190296 | 2484.1.1.38 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › eRF1_2 | 0.69 | 53.0 | 5.93e-01 | 99.3% | 100.0% |
| 4122754 | 2484.1.1.48 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › MutS_II | 0.68 | 59.0 | 5.84e-01 | 100.0% | 86.9% |
| 4634374 | 2484.1.1.38 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › eRF1_2 | 0.67 | 52.0 | 5.76e-01 | 100.0% | 100.0% |
| 4093975 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.67 | 51.0 | 5.71e-01 | 98.7% | 99.2% |
| 5022447 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.63 | 49.0 | 5.30e-01 | 97.4% | 98.4% |
| 1945733 | 2484.1.1.9 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › rve | 0.63 | 43.0 | 4.21e-01 | 82.8% | 64.6% |
| 3962721 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.62 | 44.0 | 4.89e-01 | 82.1% | 93.2% |
| 3956257 | 2484.1.1.9 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › rve | 0.61 | 45.0 | 4.15e-01 | 89.4% | 57.8% |
| 3916761 | 2484.1.1.198 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Dimer_Tnp_hAT, DUF4371 | 0.61 | 49.0 | 3.49e-01 | 84.8% | 93.1% |
| 1123736 | 2484.1.1.41 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › AnmK | 0.60 | 56.0 | 4.31e-01 | 100.0% | 94.7% |
| 3925598 | 2484.1.1.9 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › rve | 0.60 | 45.0 | 4.28e-01 | 77.5% | 87.4% |
| 4032751 | 2484.1.1.117 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › rve_3 | 0.59 | 43.0 | 4.35e-01 | 84.1% | 74.7% |
| 4928426 | 2002.1.1.236 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DHQS | 0.59 | 33.0 | 3.42e-01 | 97.4% | 58.5% |
| 3988130 | 2484.1.1.9 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › rve | 0.58 | 43.0 | 4.69e-01 | 85.4% | 92.0% |
| 3962011 | 2484.1.1.9 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › rve | 0.58 | 45.0 | 4.73e-01 | 81.5% | 100.0% |
| 4039156 | 2484.1.1.174 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › UvrC_RNaseH | 0.58 | 41.0 | 4.63e-01 | 88.7% | 99.1% |
| 5077295 | 2007.1.3.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like | 0.57 | 46.0 | 4.38e-01 | 85.4% | 100.0% |
| 3931387 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.57 | 45.0 | 4.15e-01 | 84.1% | 68.5% |
| 5027587 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.57 | 47.0 | 4.11e-01 | 88.7% | 95.7% |
| 5076312 | 2007.1.3.4 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › B12-binding | 0.57 | 44.0 | 4.03e-01 | 80.8% | 89.2% |
| 4865111 | 2003.1.1.33 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › DXP_reductoisom | 0.56 | 39.0 | 4.08e-01 | 86.1% | 76.1% |
| 3590610 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.56 | 44.0 | 4.15e-01 | 91.4% | 67.6% |
| 3588659 | 2484.1.1.9 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › rve | 0.55 | 44.0 | 4.08e-01 | 94.0% | 66.5% |
| 4456392 | 2002.1.1.176 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PEP_mutase | 0.55 | 41.0 | 3.37e-01 | 79.5% | 84.8% |
| 4932963 | 7516.1.1.1 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › NTP_transferase | 0.53 | 45.0 | 3.81e-01 | 90.7% | 78.4% |
| 4929318 | 2007.1.5.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › ATC-like | 0.53 | 42.0 | 4.41e-01 | 86.1% | 91.4% |
| 4952913 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.53 | 45.0 | 4.26e-01 | 91.4% | 82.2% |
| 4946414 | 301.13.1.0 ↗ | a+b three layers › Bacillus chorismate mutase-like › DAK1/DegV C-terminal domain › DAK1/DegV C-terminal domain | 0.53 | 41.0 | 4.45e-01 | 96.7% | 100.0% |
| 5007658 | 2484.1.1.66 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_3 | 0.52 | 42.0 | 4.40e-01 | 90.7% | 94.8% |
| 1891681 | 7590.1.1.2 ↗ | a/b three-layered sandwiches › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › Piwi | 0.52 | 41.0 | 3.97e-01 | 100.0% | 75.1% |
| 3216668 | 2007.1.3.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like | 0.51 | 37.0 | 3.94e-01 | 100.0% | 83.7% |
| None | — | 0.51 | 38.0 | 2.99e-01 | 78.1% | 36.5% | |
| 3472776 | 2007.1.2.4 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › ANF_receptor | 0.51 | 36.0 | 3.72e-01 | 97.4% | 76.6% |
| 5061013 | 7512.1.1.32 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_trans_1_4 | 0.50 | 41.0 | 3.69e-01 | 86.1% | 78.6% |
| None | — | 0.50 | 46.0 | 3.86e-01 | 100.0% | 71.8% | |
| 185388 | 2484.1.1.9 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › rve | 0.50 | 46.0 | 4.15e-01 | 100.0% | 91.7% |
| 3460608 | 2484.1.1.9 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › rve | 0.50 | 45.0 | 4.02e-01 | 100.0% | 90.0% |