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KT021004.1__ALA06391.1__P1312_020__00018
Bact-VirKT021004.1__ALA06391.1__P1312_020__00018
Identity
- Accession:
- KT021004 ↗
- Kingdom:
- phage
Quality
52.8
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 220-349_475-526
Domain cluster:
rep: MN698245.1__QGZ18159.1__HTVC111P_gp46__00046__D46-220
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF10145.15 best | PhageMin_Tail | 79.1 | 6.20e-22 | 56.0% | 48.3% |
ECOD (7)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4032310 | 159.1.2.6 ↗ | alpha bundles › all-alpha NTP pyrophosphatases › all-alpha NTP pyrophosphatases › MazG-related › PhageMin_Tail | 0.96 | 78.0 | 8.61e-01 | 90.1% | 100.0% |
| 3981280 | 159.1.2.6 ↗ | alpha bundles › all-alpha NTP pyrophosphatases › all-alpha NTP pyrophosphatases › MazG-related › PhageMin_Tail | 0.88 | 65.0 | 7.31e-01 | 75.8% | 97.9% |
| 3963765 | 159.1.2.5 ↗ | alpha bundles › all-alpha NTP pyrophosphatases › all-alpha NTP pyrophosphatases › MazG-related › TMP_3 | 0.66 | 58.0 | 5.75e-01 | 92.3% | 100.0% |
| 3980709 | 103.4.1.27 ↗ | alpha arrays › RuvA-C › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein › TMP_2 | 0.65 | 49.0 | 5.25e-01 | 78.6% | 99.4% |
| 4030882 | 159.1.2.6 ↗ | alpha bundles › all-alpha NTP pyrophosphatases › all-alpha NTP pyrophosphatases › MazG-related › PhageMin_Tail | 0.63 | 53.0 | 5.08e-01 | 89.6% | 92.4% |
| 4396660 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.51 | 27.0 | 2.53e-01 | 100.0% | 36.5% |
| 3588592 | 5049.1.3.2 ↗ | alpha complex topology › Ammonium transporter-related › Ammonium transporter-related › Na(+)-translocating NADH-quinone reductase subunit B › DUF1576 | 0.51 | 44.0 | 3.43e-01 | 92.3% | 54.8% |
D2
medium
residues 350-474
Domain cluster:
rep: JQ066768.1__AFA44858.1__RcapNL_00018__00018__D87-256
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF10145.15 best | PhageMin_Tail | 67.6 | 2.10e-18 | 79.2% | 43.8% |
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1nvmA02 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.59 | 32.0 | 4.11e-01 | 80.0% | 98.4% |
| 4zvaA00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.59 | 43.0 | 4.07e-01 | 75.2% | 94.6% |
| 5nohA00 | 1.20.120.1350 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Pneumovirus matrix protein 2 (M2), zinc-binding domain | 0.56 | 32.0 | 3.52e-01 | 93.6% | 66.0% |
| 3b0xA01 | 1.10.150.110 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › DNA polymerase beta, N-terminal domain-like | 0.56 | 36.0 | 4.20e-01 | 91.2% | 93.1% |
| 3fyaB00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.55 | 34.0 | 4.16e-01 | 94.4% | 100.0% |
| 1z2iA01 | 1.10.1530.10 | Mainly Alpha › Orthogonal Bundle › Hypothetical Oxidoreductase Yiak; Chain: A, domain 1 › Malate/L-lactate/L-sulpholactate dehydrogenase, four-helix barrel | 0.53 | 36.0 | 4.12e-01 | 89.6% | 93.5% |
| 4jrfA03 | 1.10.20.150 | Mainly Alpha › Orthogonal Bundle › Histone, subunit A › | 0.51 | 34.0 | 3.66e-01 | 72.8% | 79.2% |
| 2ivxB02 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.50 | 40.0 | 4.20e-01 | 97.6% | 93.9% |
ECOD (9)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4030882 | 159.1.2.6 ↗ | alpha bundles › all-alpha NTP pyrophosphatases › all-alpha NTP pyrophosphatases › MazG-related › PhageMin_Tail | 0.87 | 82.0 | 6.76e-01 | 100.0% | 62.4% |
| 3945172 | 3826.1.1.0 ↗ | alpha bundles › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) | 0.70 | 63.0 | 5.34e-01 | 100.0% | 61.9% |
| 3016249 | 532.2.1.0 ↗ | alpha arrays › Type III secretion system domain-like › Type III secretion system domains › Type III secretion system domains | 0.55 | 35.0 | 3.82e-01 | 94.4% | 77.8% |
| 3194862 | 5076.1.1.1 ↗ | alpha complex topology › Mitochondrial ADP/ATP carrier-like › Mitochondrial ADP/ATP carrier › Mitochondrial ADP/ATP carrier › Mito_carr | 0.53 | 45.0 | 3.44e-01 | 94.4% | 97.0% |
| 3758701 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.53 | 29.0 | 3.23e-01 | 90.4% | 67.4% |
| 4643581 | 603.2.1.0 ↗ | alpha bundles › STAT-like › STAT › STAT | 0.52 | 37.0 | 3.15e-01 | 72.0% | 89.2% |
| 3436235 | 4121.1.1.0 ↗ | a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like | 0.52 | 32.0 | 2.84e-01 | 84.0% | 41.1% |
| 3623413 | 5067.1.1.3 ↗ | alpha bundles › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › Patched | 0.50 | 45.0 | 3.75e-01 | 100.0% | 70.9% |
| 3817603 | 304.48.1.0 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like | 0.50 | 39.0 | 2.71e-01 | 84.0% | 24.5% |
D3
medium
residues 1127-1247
D4
medium
residues 1381-1449
D5
medium
residues 1453-1576
Domain cluster:
rep: KY629563.1__ARK07422.1__LAV_00022__00022__D6-135