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KT070868.1__AKQ08587.1__PBC5_021__00021

Bact-Vir

KT070868.1__AKQ08587.1__PBC5_021__00021

Identity

Accession:
KT070868 ↗
Kingdom:
phage

Quality

90.7 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 43-158
PDB
CATH (2)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2anrA02 3.30.1370.10 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 0.55 29.0 3.45e-01 87.9% 76.0%
3ue3A01 3.90.1310.10 Alpha Beta › Alpha-Beta Complex › Penicillin-binding protein 2a (Domain 2) › Penicillin-binding protein 2a (Domain 2) 0.53 35.0 3.77e-01 99.1% 80.4%
ECOD (7)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3481511 304.9.1.0 a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD 0.64 30.0 3.58e-01 91.4% 65.3%
3440530 3501.1.1.1 a+b two layers › protein PCC1 › protein PCC1 › protein PCC1 › Pcc1 0.61 30.0 4.08e-01 87.9% 98.2%
3209689 212.1.1.0 a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like 0.58 27.0 3.01e-01 85.3% 50.5%
4936812 2484.1.1.49 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Hydant_A_N 0.54 30.0 2.94e-01 95.7% 48.0%
5052204 205.1.1.0 a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin 0.54 28.0 3.14e-01 85.3% 63.5%
3438351 2004.1.1.87 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N 0.54 33.0 2.99e-01 86.2% 45.2%
3399938 304.9.1.1 a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 0.51 25.0 2.58e-01 87.9% 42.1%