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KT151959.1__ALA47838.1__SUNDANCE_22__00022

Bact-Vir

KT151959.1__ALA47838.1__SUNDANCE_22__00022

Identity

Accession:
KT151959 ↗
Kingdom:
phage

Quality

85.4 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-10_91-160
PDB
CATH (40)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1vloA04 2.40.30.110 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Aminomethyltransferase beta-barrel domains 0.62 42.0 4.06e-01 87.5% 61.5%
3kyfA02 2.40.10.220 Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains 0.62 50.0 4.38e-01 100.0% 59.0%
3fgeA01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.62 55.0 4.32e-01 100.0% 79.1%
1uscA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.61 54.0 4.18e-01 100.0% 72.5%
1c5eA00 2.40.300.10 Mainly Beta › Beta Barrel › Virus Head Decoration Protein; Chain: A, › Head decoration protein D 0.60 48.0 4.53e-01 86.3% 92.6%
2r6vA01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.59 51.0 4.15e-01 100.0% 81.1%
3nfwA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.59 52.0 4.04e-01 100.0% 57.5%
8ct0B01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.59 51.0 4.10e-01 100.0% 80.1%
3bpkA01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.59 51.0 4.01e-01 100.0% 80.4%
4xhyA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.58 52.0 4.15e-01 100.0% 63.4%
4f07E00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.58 51.0 4.21e-01 100.0% 85.2%
3cb0D00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.58 51.0 4.13e-01 100.0% 66.5%
1xzpB00 3.30.1360.120 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › Probable tRNA modification gtpase trme; domain 1 0.58 51.0 4.39e-01 100.0% 65.6%
3pftA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.58 50.0 4.11e-01 100.0% 82.1%
3dclA01 2.102.30.10 Mainly Beta › 3-layer Sandwich › tm1086 (SG structure) fold › tm1086 (SG structure) domain 0.57 52.0 4.15e-01 98.8% 52.3%
4l82A00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.57 50.0 4.07e-01 100.0% 84.0%
5choF00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.57 49.0 4.03e-01 100.0% 84.4%
1rz1A00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.57 49.0 4.05e-01 100.0% 84.2%
3d37B01 2.30.300.10 Mainly Beta › Roll › Phage tail proteins - horseshoe like beta roll fold › Baseplate protein-like domain - beta roll fold 0.56 47.0 3.68e-01 100.0% 42.5%
7xc8A02 2.60.40.760 Mainly Beta › Sandwich › Immunoglobulin-like › Expansin, cellulose-binding-like domain 0.56 39.0 3.67e-01 100.0% 58.8%
1i0rA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.56 47.0 3.89e-01 98.8% 67.7%
1wruA01 2.30.300.10 Mainly Beta › Roll › Phage tail proteins - horseshoe like beta roll fold › Baseplate protein-like domain - beta roll fold 0.56 46.0 3.59e-01 100.0% 41.7%
2m2jA00 3.30.1660.10 Alpha Beta › 2-Layer Sandwich › Dodecin subunit-like › Flavin-binding protein dodecin 0.55 38.0 3.98e-01 86.3% 78.9%
4hkhA00 2.30.110.20 Mainly Beta › Roll › Pnp Oxidase; Chain A › Hcp1-like 0.55 49.0 4.04e-01 100.0% 75.8%
3e38A02 2.60.40.3090 Mainly Beta › Sandwich › Immunoglobulin-like › 0.55 38.0 3.87e-01 100.0% 73.4%
1yu0A02 2.80.20.10 Mainly Beta › Trefoil › Tail fiber receptor-binding protein › Tail fiber receptor-binding protein 0.55 43.0 3.67e-01 90.0% 75.3%
2x9aA00 2.30.27.10 Mainly Beta › Roll › Phage FD Coat Protein, Membrane penetration domain › Phage FD Coat Protein,Membrane penetration domain 0.54 36.0 4.00e-01 87.5% 88.5%
1g3pA02 3.90.450.1 Alpha Beta › Alpha-Beta Complex › Minor Coat Protein; domain 2 › Minor Coat Protein; Domain 2 0.54 41.0 3.81e-01 90.0% 63.5%
3rgfA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.53 41.0 3.88e-01 96.2% 69.8%
1k28D03 2.40.30.150 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Bacteriophage T4, Gp27, baseplate hub, domain 3 0.53 44.0 4.25e-01 100.0% 81.1%
1gzeA00 3.90.176.10 Alpha Beta › Alpha-Beta Complex › Toxin ADP-ribosyltransferase; Chain A, domain 1 › Toxin ADP-ribosyltransferase; Chain A, domain 1 0.52 43.0 3.24e-01 92.5% 97.6%
1blxA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.52 45.0 4.31e-01 97.5% 85.9%
2kz4A00 2.40.10.270 Mainly Beta › Beta Barrel › Thrombin, subunit H › Bacteriophage SPP1 head-tail adaptor protein 0.52 46.0 4.11e-01 100.0% 95.5%
4hikA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.51 37.0 3.22e-01 78.8% 89.9%
2pmzB07 2.40.50.150 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II, Rpb2 subunit, wall domain 0.51 42.0 3.71e-01 93.8% 94.4%
6k3lB02 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.51 39.0 3.77e-01 100.0% 73.6%
4r3nA02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.51 43.0 3.35e-01 100.0% 90.0%
1bwvA01 3.30.70.150 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RuBisCO large subunit, N-terminal domain 0.51 40.0 3.44e-01 86.3% 57.8%
3k2nA00 3.30.450.40 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain 0.50 42.0 3.33e-01 95.0% 67.2%
2w1jA00 2.40.260.10 Mainly Beta › Beta Barrel › Sortase; Chain: A; › Sortase 0.50 43.0 3.35e-01 100.0% 78.5%
ECOD (50)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5026244 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.70 52.0 5.00e-01 100.0% 68.9%
2137681 1.1.5.25 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ 0.64 52.0 4.66e-01 100.0% 63.3%
4943219 205.1.1.123 a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer2_BFD 0.62 52.0 4.16e-01 100.0% 47.1%
160389 1.1.5.25 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ 0.61 49.0 4.24e-01 100.0% 56.1%
4342567 1.1.5.25 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ 0.61 49.0 4.37e-01 100.0% 60.9%
4982501 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.60 51.0 4.86e-01 100.0% 77.9%
4066625 1.1.7.9 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › tRNA-synt_2c 0.60 54.0 4.57e-01 100.0% 72.3%
3299946 1.1.7.81 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › SEN1_barrel 0.60 54.0 4.78e-01 100.0% 72.2%
3518863 221.1.2.16 a+b two layers › beta-Grasp › Ubiquitin-related › Alpha-L RNA-binding motif › MTRES1_C 0.59 47.0 4.33e-01 86.3% 100.0%
3994103 389.2.1.3 few secondary structure elements › EGF-like › Serine protease inhibitors › Serine protease inhibitors › TIL_2 0.59 41.0 4.55e-01 88.7% 89.2%
5030457 5090.1.1.0 beta complex topology › Viral glycoprotein, central and dimerisation domains-like › Viral glycoprotein, central and dimerisation domains › Viral glycoprotein, central and dimerisation domains 0.59 49.0 4.41e-01 91.3% 98.2%
3792089 325.1.7.2 a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif › RNA_pol_Rpb2_6 0.59 47.0 3.96e-01 86.3% 96.3%
3696371 1.1.5.10 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Flavin_Reduct 0.58 50.0 3.72e-01 98.8% 53.5%
3786933 325.1.7.2 a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif › RNA_pol_Rpb2_6 0.58 47.0 4.00e-01 86.3% 98.4%
4482805 1.1.5.10 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Flavin_Reduct 0.58 50.0 3.83e-01 98.8% 57.9%
5002753 1.1.13.0 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.58 47.0 4.68e-01 97.5% 83.5%
4137463 325.1.7.8 a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif › RnfC_N 0.57 48.0 4.81e-01 90.0% 95.0%
3616864 221.1.2.0 a+b two layers › beta-Grasp › Ubiquitin-related › Alpha-L RNA-binding motif 0.57 46.0 4.24e-01 87.5% 97.1%
4328171 1.1.9.5 beta barrels › cradle loop barrel › RIFT-related › PUA domain › LON_substr_bdg 0.57 46.0 3.28e-01 87.5% 32.7%
4956728 325.1.7.2 a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif › RNA_pol_Rpb2_6 0.57 45.0 3.86e-01 86.3% 96.9%
3210962 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.56 45.0 4.31e-01 100.0% 73.7%
2642578 1.1.13.3 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_H_T_join 0.56 50.0 4.52e-01 100.0% 98.2%
3276828 11.1.1.698 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_TgrO1 0.56 40.0 4.00e-01 100.0% 71.8%
3989463 221.1.2.5 a+b two layers › beta-Grasp › Ubiquitin-related › Alpha-L RNA-binding motif › S4 0.56 43.0 4.27e-01 83.7% 100.0%
3999411 389.1.1.0 few secondary structure elements › EGF-like › EGF-related › EGF/Laminin 0.56 38.0 4.31e-01 87.5% 93.3%
3991321 389.1.1.0 few secondary structure elements › EGF-like › EGF-related › EGF/Laminin 0.56 40.0 4.41e-01 90.0% 92.3%
4260084 1.1.5.25 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ 0.56 44.0 3.94e-01 100.0% 59.2%
3998980 389.2.1.0 few secondary structure elements › EGF-like › Serine protease inhibitors › Serine protease inhibitors 0.56 38.0 4.27e-01 90.0% 90.5%
4682340 325.1.7.2 a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif › RNA_pol_Rpb2_6 0.55 45.0 3.84e-01 86.3% 97.6%
4003569 389.2.1.0 few secondary structure elements › EGF-like › Serine protease inhibitors › Serine protease inhibitors 0.55 38.0 4.37e-01 86.3% 96.7%
3936663 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.55 50.0 4.28e-01 100.0% 76.0%
5046032 3110.1.1.0 a/b three-layered sandwiches › STT3/PglB/AglB core domain › STT3/PglB/AglB core domain › STT3/PglB/AglB core domain 0.55 48.0 3.97e-01 97.5% 84.3%
3994135 387.1.1.39 few secondary structure elements › omega toxin-like › omega toxin-related › omega toxin-related › TIL_2 0.54 43.0 4.57e-01 98.8% 95.7%
4031285 1.1.13.64 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › TT1_Tal 0.54 46.0 4.49e-01 98.8% 83.3%
3491140 221.1.2.16 a+b two layers › beta-Grasp › Ubiquitin-related › Alpha-L RNA-binding motif › MTRES1_C 0.54 43.0 4.00e-01 87.5% 91.4%
4093842 304.102.1.1 a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_2 0.54 46.0 3.32e-01 96.2% 38.8%
3970830 1.1.13.0 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.53 43.0 4.02e-01 100.0% 71.0%
4453032 1.1.7.7 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 0.53 42.0 3.98e-01 100.0% 70.0%
3990261 389.4.1.7 few secondary structure elements › EGF-like › Fibulin-4 EGF-like 1 domain › Fibulin-4 EGF-like 1 domain › TIL_2 0.53 38.0 4.22e-01 90.0% 92.3%
5069785 284.4.1.0 a+b two layers › FKBP-like › Archaeal FKBP insertion domain › Archaeal FKBP insertion domain 0.53 45.0 3.83e-01 91.3% 78.4%
4379249 1.1.5.25 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ 0.53 46.0 3.99e-01 98.8% 63.2%
4001979 389.4.1.7 few secondary structure elements › EGF-like › Fibulin-4 EGF-like 1 domain › Fibulin-4 EGF-like 1 domain › TIL_2 0.52 40.0 4.30e-01 96.2% 92.9%
4001196 389.4.1.7 few secondary structure elements › EGF-like › Fibulin-4 EGF-like 1 domain › Fibulin-4 EGF-like 1 domain › TIL_2 0.52 41.0 4.37e-01 98.8% 95.7%
4437930 304.102.1.1 a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_2 0.52 44.0 3.22e-01 96.2% 39.5%
5036359 304.4.1.0 a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel 0.52 38.0 3.55e-01 85.0% 61.0%
119252 1.1.13.3 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_H_T_join 0.52 46.0 4.11e-01 100.0% 95.5%
4024673 325.1.7.0 a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif 0.51 39.0 3.63e-01 86.3% 100.0%
4002600 389.4.1.7 few secondary structure elements › EGF-like › Fibulin-4 EGF-like 1 domain › Fibulin-4 EGF-like 1 domain › TIL_2 0.51 40.0 3.42e-01 96.2% 53.7%
4669352 1.1.13.0 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.51 45.0 4.07e-01 98.8% 92.7%
3331686 304.109.1.4 a+b two layers › Alpha-beta plaits › Ribosomal proteins S24e, L23 and L15e › Ribosomal proteins S24e, L23 and L15e › Ribosomal_S24e 0.50 35.0 3.47e-01 87.5% 66.7%
D2 medium residues 11-90
PDB
CATH (7)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1uz5A04 2.40.340.10 Mainly Beta › Beta Barrel › Beta-clip › MoeA, C-terminal, domain IV 0.66 52.0 5.50e-01 98.8% 95.8%
6ethA04 2.40.340.10 Mainly Beta › Beta Barrel › Beta-clip › MoeA, C-terminal, domain IV 0.61 53.0 5.12e-01 96.2% 89.9%
8bveA03 2.40.340.10 Mainly Beta › Beta Barrel › Beta-clip › MoeA, C-terminal, domain IV 0.61 48.0 5.03e-01 95.0% 100.0%
1wu2A04 2.40.340.10 Mainly Beta › Beta Barrel › Beta-clip › MoeA, C-terminal, domain IV 0.58 48.0 4.87e-01 100.0% 96.1%
1g8lA04 2.40.340.10 Mainly Beta › Beta Barrel › Beta-clip › MoeA, C-terminal, domain IV 0.58 49.0 5.07e-01 95.0% 100.0%
2hcjB02 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.58 40.0 3.87e-01 100.0% 62.8%
1lvbA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.55 33.0 3.02e-01 98.8% 42.6%
ECOD (15)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5016125 70.4.1.0 beta barrels › beta-clip › Head decoration protein D (gpD, major capsid protein D) › Head decoration protein D (gpD, major capsid protein D) 0.78 52.0 6.11e-01 97.5% 100.0%
4963571 70.4.1.0 beta barrels › beta-clip › Head decoration protein D (gpD, major capsid protein D) › Head decoration protein D (gpD, major capsid protein D) 0.77 52.0 5.75e-01 100.0% 86.2%
5022524 70.4.1.0 beta barrels › beta-clip › Head decoration protein D (gpD, major capsid protein D) › Head decoration protein D (gpD, major capsid protein D) 0.77 53.0 5.62e-01 100.0% 81.4%
2526359 70.4.1.2 beta barrels › beta-clip › Head decoration protein D (gpD, major capsid protein D) › Head decoration protein D (gpD, major capsid protein D) › Phage_head_fibr 0.70 48.0 5.34e-01 100.0% 96.7%
3227803 70.1.1.0 beta barrels › beta-clip › MoeA C-terminal domain-like › MoeA C-terminal domain-like 0.64 48.0 5.17e-01 95.0% 100.0%
3239806 70.1.1.1 beta barrels › beta-clip › MoeA C-terminal domain-like › MoeA C-terminal domain-like › MoeA_C 0.63 54.0 5.35e-01 95.0% 92.9%
4990371 70.1.1.0 beta barrels › beta-clip › MoeA C-terminal domain-like › MoeA C-terminal domain-like 0.62 49.0 5.16e-01 98.8% 98.6%
4956897 70.1.1.1 beta barrels › beta-clip › MoeA C-terminal domain-like › MoeA C-terminal domain-like › MoeA_C 0.61 52.0 5.28e-01 100.0% 96.2%
4991571 70.1.1.1 beta barrels › beta-clip › MoeA C-terminal domain-like › MoeA C-terminal domain-like › MoeA_C 0.61 52.0 5.26e-01 100.0% 95.0%
4953517 70.1.1.1 beta barrels › beta-clip › MoeA C-terminal domain-like › MoeA C-terminal domain-like › MoeA_C 0.61 48.0 5.01e-01 98.8% 95.9%
4975116 70.1.1.0 beta barrels › beta-clip › MoeA C-terminal domain-like › MoeA C-terminal domain-like 0.60 50.0 5.03e-01 98.8% 93.8%
5011090 70.1.1.1 beta barrels › beta-clip › MoeA C-terminal domain-like › MoeA C-terminal domain-like › MoeA_C 0.59 47.0 4.83e-01 96.2% 94.7%
4950136 70.1.1.1 beta barrels › beta-clip › MoeA C-terminal domain-like › MoeA C-terminal domain-like › MoeA_C 0.56 44.0 4.51e-01 96.2% 96.0%
5012061 70.1.1.0 beta barrels › beta-clip › MoeA C-terminal domain-like › MoeA C-terminal domain-like 0.55 41.0 4.35e-01 96.2% 95.7%
5033892 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.51 30.0 3.27e-01 90.0% 70.8%