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KT151959.1__ALA47843.1__SUNDANCE_27__00027

Bact-Vir

KT151959.1__ALA47843.1__SUNDANCE_27__00027

Identity

Accession:
KT151959 ↗
Kingdom:
phage

Quality

85.3 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 39-103
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF27289.1 best YomX_N 28.1 2.30e-06 98.5% 69.5%
CATH (70)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3f3bA00 2.40.10.370 Mainly Beta › Beta Barrel › Thrombin, subunit H › Protein of unknown function DUF3599 0.86 79.0 6.42e-01 100.0% 93.0%
2rdeA02 2.40.10.220 Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains 0.84 77.0 6.37e-01 100.0% 69.4%
3gqbA01 2.40.30.20 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.82 61.0 5.92e-01 87.7% 71.8%
2pp6A02 2.40.10.210 Mainly Beta › Beta Barrel › Thrombin, subunit H › Phage tail proteins (gpFII-like) 0.80 71.0 7.28e-01 96.9% 98.4%
4xhyA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.80 72.0 5.32e-01 100.0% 71.4%
3gs9A01 6.20.110.10 Special › Other non-globular › Thrombin, subunit H › 0.79 70.0 6.56e-01 96.9% 100.0%
3cb0D00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.79 71.0 5.27e-01 100.0% 74.5%
1rz1A00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.78 69.0 5.28e-01 100.0% 75.0%
4f07E00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.78 70.0 5.32e-01 100.0% 75.8%
6zlvA01 2.40.10.350 Mainly Beta › Beta Barrel › Thrombin, subunit H › Rod shape-determining protein MreC, domain 2 0.78 69.0 6.59e-01 100.0% 98.7%
3bnkA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.78 69.0 4.99e-01 100.0% 64.5%
2ecuA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.78 69.0 5.31e-01 100.0% 72.5%
1uscA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.78 69.0 5.04e-01 100.0% 66.3%
1i0rA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.77 68.0 5.10e-01 100.0% 75.2%
2ey4D00 2.40.10.230 Mainly Beta › Beta Barrel › Thrombin, subunit H › Probable tRNA pseudouridine synthase domain 0.76 62.0 5.95e-01 87.7% 76.0%
3u28C00 2.40.10.230 Mainly Beta › Beta Barrel › Thrombin, subunit H › Probable tRNA pseudouridine synthase domain 0.74 62.0 5.53e-01 92.3% 66.3%
2nwaA01 2.40.240.20 Mainly Beta › Beta Barrel › Ribosomal Protein L25; Chain P › Hypothetical PUA domain-like; domain 1 0.74 62.0 5.92e-01 92.3% 86.7%
1wxrA01 2.40.10.120 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.74 65.0 4.36e-01 100.0% 43.2%
2kcaA00 2.40.10.270 Mainly Beta › Beta Barrel › Thrombin, subunit H › Bacteriophage SPP1 head-tail adaptor protein 0.72 62.0 5.28e-01 100.0% 89.9%
4aq1A01 2.60.40.1220 Mainly Beta › Sandwich › Immunoglobulin-like › 0.71 54.0 4.82e-01 84.6% 57.4%
2r6vA01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.70 60.0 4.59e-01 100.0% 76.2%
3szeA01 2.40.10.120 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.69 60.0 3.91e-01 100.0% 33.4%
1ejfA00 2.60.40.790 Mainly Beta › Sandwich › Immunoglobulin-like › 0.69 54.0 4.56e-01 86.2% 70.9%
2zu2A01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.69 61.0 5.31e-01 100.0% 81.6%
4zj9A00 2.60.40.790 Mainly Beta › Sandwich › Immunoglobulin-like › 0.68 53.0 4.75e-01 86.2% 98.9%
2ra1A04 2.60.40.1220 Mainly Beta › Sandwich › Immunoglobulin-like › 0.67 53.0 4.67e-01 86.2% 62.9%
4rzkA00 2.60.40.790 Mainly Beta › Sandwich › Immunoglobulin-like › 0.64 49.0 4.51e-01 84.6% 90.8%
2gy5A04 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.63 48.0 4.23e-01 84.6% 62.6%
6f2mA02 2.40.30.290 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.63 50.0 4.66e-01 92.3% 78.2%
1ohfA03 2.60.270.70 Mainly Beta › Sandwich › Mutm (Fpg) Protein; Chain: A, domain 2 › 0.62 45.0 3.51e-01 83.1% 35.5%
1odhA01 2.20.25.670 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › GCM domain, large subdomain 0.61 37.0 3.67e-01 95.4% 54.9%
5jzjA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.61 55.0 4.84e-01 100.0% 75.5%
4wnoA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.60 54.0 4.91e-01 100.0% 81.6%
6fdyU01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.60 45.0 4.24e-01 81.5% 85.0%
2weiA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.60 54.0 4.80e-01 100.0% 78.9%
3bp6B02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.59 46.0 4.19e-01 86.2% 68.2%
2y7jA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.59 52.0 4.72e-01 100.0% 86.7%
2vz6B01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.59 52.0 4.84e-01 100.0% 86.7%
5xd6B01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.59 52.0 4.62e-01 100.0% 71.3%
2gqrA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.58 53.0 4.57e-01 100.0% 75.0%
3kreA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.58 53.0 4.60e-01 100.0% 77.3%
3f3zA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.58 51.0 4.77e-01 100.0% 85.4%
2nn5A00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.58 42.0 3.18e-01 80.0% 62.6%
2ej9A01 3.30.930.10 Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 0.57 51.0 3.67e-01 100.0% 66.5%
2psoB02 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.57 42.0 3.13e-01 80.0% 76.4%
2y4iB01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.57 51.0 4.60e-01 100.0% 75.8%
6bg2A02 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.57 51.0 4.12e-01 100.0% 58.4%
1s9iB01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.57 51.0 4.53e-01 100.0% 75.3%
2clqA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.57 50.0 4.58e-01 100.0% 78.8%
2wngA03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.56 41.0 3.85e-01 81.5% 72.4%
4azsA02 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.56 50.0 4.66e-01 100.0% 92.6%
4redB01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.56 50.0 4.58e-01 98.5% 84.5%
5hesA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.56 47.0 4.38e-01 100.0% 75.3%
4eqmA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.56 49.0 4.48e-01 100.0% 80.9%
4af3A01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.56 50.0 4.51e-01 100.0% 80.7%
4myjA05 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.56 48.0 4.40e-01 98.5% 79.5%
2acxA02 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.55 48.0 4.35e-01 100.0% 80.2%
4itjB01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.54 48.0 4.36e-01 100.0% 83.0%
3w1zC00 2.60.40.790 Mainly Beta › Sandwich › Immunoglobulin-like › 0.54 45.0 3.73e-01 100.0% 83.1%
4c0tA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.54 40.0 3.59e-01 80.0% 95.7%
3dlsB01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.53 47.0 4.14e-01 100.0% 76.5%
2l8kA00 3.30.1330.220 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Arterivirus nonstructural protein 7 alpha 0.53 45.0 3.77e-01 100.0% 78.0%
5jdjA00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 40.0 3.64e-01 84.6% 70.3%
4ydzA00 2.60.40.790 Mainly Beta › Sandwich › Immunoglobulin-like › 0.53 39.0 3.23e-01 84.6% 65.9%
3uc4A01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.52 43.0 4.08e-01 100.0% 82.4%
2qi2A01 2.30.30.870 Mainly Beta › Roll › SH3 type barrels. › Pelota, domain A 0.52 44.0 3.84e-01 96.9% 62.5%
3b5hA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 38.0 3.57e-01 84.6% 64.6%
3d2lA02 2.20.25.110 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › S-adenosyl-L-methionine-dependent methyltransferases 0.51 37.0 3.80e-01 100.0% 79.4%
1mdcA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.50 38.0 3.09e-01 83.1% 68.7%
1pbyA02 2.40.128.120 Mainly Beta › Beta Barrel › Lipocalin › Quinohemoprotein amine dehydrogenase alpha subunit, domain 2 0.50 38.0 3.33e-01 84.6% 78.3%
ECOD (77)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4669352 1.1.13.0 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.87 82.0 6.69e-01 100.0% 85.5%
169594 1.1.13.14 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › DUF3599 0.86 79.0 6.42e-01 100.0% 93.0%
3058418 1.1.13.2 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_attach 0.84 77.0 6.51e-01 100.0% 82.4%
4880414 1.1.7.17 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.83 61.0 5.99e-01 86.2% 72.5%
3975275 1.1.13.15 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Gifsy-2 0.83 77.0 6.68e-01 100.0% 75.8%
4631894 1.1.12.1 beta barrels › cradle loop barrel › RIFT-related › barrel domain in QueA-like proteins › Queuosine_synth 0.82 73.0 5.95e-01 100.0% 54.8%
4260208 1.1.13.62 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › PF27197 0.82 71.0 6.00e-01 93.8% 100.0%
185291 1.1.13.20 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Prophage_tailD1 0.79 71.0 6.63e-01 98.5% 100.0%
4157526 1.1.12.1 beta barrels › cradle loop barrel › RIFT-related › barrel domain in QueA-like proteins › Queuosine_synth 0.79 68.0 5.64e-01 100.0% 53.9%
4957565 1.1.13.0 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.78 70.0 5.60e-01 98.5% 96.8%
4928053 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.78 68.0 5.44e-01 93.8% 70.8%
5026244 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.77 67.0 5.95e-01 93.8% 72.2%
5048051 1.1.7.20 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Gar1 0.77 63.0 5.60e-01 87.7% 64.0%
4933363 1.1.7.20 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Gar1 0.77 63.0 6.03e-01 90.8% 78.4%
5035997 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.77 62.0 6.10e-01 87.7% 81.4%
5000784 1.1.7.20 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Gar1 0.77 64.0 5.49e-01 90.8% 60.0%
5074238 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.77 62.0 5.93e-01 87.7% 76.0%
5017568 1.1.7.20 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Gar1 0.77 62.0 5.81e-01 87.7% 73.8%
5077063 1.1.7.20 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Gar1 0.77 62.0 5.93e-01 87.7% 76.0%
4969578 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.76 61.0 5.89e-01 87.7% 77.0%
4056039 1.1.12.1 beta barrels › cradle loop barrel › RIFT-related › barrel domain in QueA-like proteins › Queuosine_synth 0.75 65.0 5.36e-01 100.0% 54.8%
5018347 1.1.17.0 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 0.74 65.0 4.96e-01 100.0% 44.5%
3272761 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.73 59.0 5.03e-01 86.2% 56.0%
4602902 319.1.1.1 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 0.72 56.0 4.46e-01 84.6% 72.3%
4316228 1.1.12.1 beta barrels › cradle loop barrel › RIFT-related › barrel domain in QueA-like proteins › Queuosine_synth 0.72 60.0 5.10e-01 100.0% 57.1%
4951974 319.1.1.1 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 0.70 55.0 4.82e-01 84.6% 82.1%
4928787 319.1.1.0 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones 0.70 54.0 5.05e-01 83.1% 97.5%
3265288 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.70 55.0 4.74e-01 87.7% 56.2%
4595973 1.1.12.0 beta barrels › cradle loop barrel › RIFT-related › barrel domain in QueA-like proteins 0.69 60.0 4.98e-01 100.0% 55.8%
5020903 319.1.1.0 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones 0.69 54.0 4.89e-01 86.2% 87.8%
3969735 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.69 57.0 5.64e-01 92.3% 92.9%
3259435 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.68 54.0 5.05e-01 86.2% 72.5%
2060704 1.1.5.13 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Peptidase_S6 0.68 58.0 3.96e-01 100.0% 42.8%
4413783 1.1.9.5 beta barrels › cradle loop barrel › RIFT-related › PUA domain › LON_substr_bdg 0.68 56.0 3.78e-01 90.8% 35.8%
3270576 11.1.1.29 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › TIG 0.67 51.0 4.83e-01 84.6% 67.5%
3393300 319.1.1.0 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones 0.67 53.0 4.51e-01 86.2% 68.6%
4947901 319.1.1.0 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones 0.66 52.0 4.60e-01 84.6% 83.9%
5005273 319.1.1.0 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones 0.66 50.0 4.57e-01 83.1% 85.2%
3256524 11.1.1.29 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › TIG 0.65 48.0 4.54e-01 86.2% 65.0%
3399963 319.1.1.0 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones 0.65 51.0 4.20e-01 86.2% 63.3%
4974098 319.1.1.1 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 0.65 51.0 4.58e-01 86.2% 85.6%
5049530 319.1.1.23 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › PF29697 0.65 50.0 4.56e-01 86.2% 87.8%
3259324 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.64 50.0 4.60e-01 86.2% 65.9%
3948358 11.1.1.791 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF8393 0.63 51.0 4.45e-01 89.2% 63.0%
3177162 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.63 47.0 4.06e-01 83.1% 73.6%
4060488 1.1.7.17 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.63 51.0 4.85e-01 93.8% 76.2%
3249410 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.62 49.0 4.82e-01 86.2% 85.5%
4964178 319.1.1.29 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › DUF7127 0.62 48.0 4.66e-01 84.6% 98.6%
3966295 319.3.1.0 beta sandwiches › HSP20-like › B2 domain of PilQ › B2 domain of PilQ 0.62 51.0 4.47e-01 92.3% 76.0%
3263516 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.62 48.0 4.19e-01 87.7% 66.7%
3261759 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.61 47.0 4.42e-01 87.7% 71.8%
3267681 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.60 47.0 3.99e-01 86.2% 61.8%
4025843 319.1.1.1 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 0.60 51.0 4.30e-01 96.9% 91.3%
3768909 11.1.1.363 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C2-set_3 0.60 47.0 4.09e-01 86.2% 68.0%
3965026 319.3.1.1 beta sandwiches › HSP20-like › B2 domain of PilQ › B2 domain of PilQ › AMIN 0.59 50.0 4.37e-01 95.4% 64.0%
6322 331.3.1.9 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › AHSA1 0.59 41.0 3.17e-01 75.4% 65.0%
2770325 319.1.1.1 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 0.59 52.0 4.41e-01 98.5% 86.8%
3261363 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.59 47.0 4.05e-01 90.8% 66.4%
3288251 331.3.1.9 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › AHSA1 0.58 42.0 3.25e-01 78.5% 71.0%
3735914 331.3.1.2 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Ring_hydroxyl_A 0.58 39.0 2.75e-01 70.8% 47.7%
4993868 319.1.1.0 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones 0.58 43.0 4.23e-01 83.1% 100.0%
3277508 11.1.1.793 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF7743 0.58 45.0 3.95e-01 86.2% 64.0%
3165921 881.4.1.1 a+b three layers › Mog1p/PsbP-like › C-terminal domain in sigma-E factor regulatory protein rseB › C-terminal domain in sigma-E factor regulatory protein rseB › MucB_RseB_C 0.58 48.0 4.25e-01 100.0% 63.2%
3268578 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.58 47.0 4.00e-01 92.3% 67.3%
3165231 11.1.1.47 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › CBM_48 0.57 43.0 3.48e-01 81.5% 42.3%
5011151 319.1.1.1 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 0.57 50.0 3.81e-01 100.0% 68.8%
3276840 11.1.1.793 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF7743 0.57 44.0 3.78e-01 86.2% 53.6%
4356785 11.1.5.1 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › Fimbrial 0.57 44.0 3.47e-01 86.2% 73.6%
3958491 3513.1.1.4 a+b two layers › Putative lipoprotein LppA › Putative lipoprotein LppA › Putative lipoprotein LppA › PF27220 0.57 47.0 3.75e-01 98.5% 74.7%
3264437 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.56 46.0 4.05e-01 96.9% 66.7%
5052436 319.1.1.0 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones 0.54 44.0 4.18e-01 96.9% 98.8%
3825746 247.1.1.27 a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › DUF4336 0.54 43.0 2.71e-01 89.2% 37.5%
3249204 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.53 45.0 4.06e-01 96.9% 70.5%
3274257 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.52 39.0 3.32e-01 84.6% 62.5%
3903053 220.1.1.162 beta barrels › PH domain-like › PH domain-like › PH domain-like › PF31014 0.52 38.0 2.88e-01 80.0% 52.4%
5002276 319.1.1.0 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones 0.52 42.0 4.08e-01 96.9% 100.0%
3901284 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.50 44.0 3.51e-01 100.0% 51.1%
D2 high residues 106-205
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF27197.1 best YomX_C 71.6 6.10e-20 88.0% 97.6%
CATH (27)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2pp6A02 2.40.10.210 Mainly Beta › Beta Barrel › Thrombin, subunit H › Phage tail proteins (gpFII-like) 0.78 48.0 5.98e-01 89.0% 100.0%
3bpkA01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.70 60.0 4.91e-01 92.0% 73.2%
3fppA01 2.40.30.170 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Efflux pump adaptor protein, beta barrel domain 0.69 50.0 5.02e-01 82.0% 73.1%
4g6iB01 2.40.30.20 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.67 44.0 4.62e-01 88.0% 74.2%
2ptfA01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.67 57.0 5.00e-01 92.0% 78.9%
6toaE01 2.40.10.270 Mainly Beta › Beta Barrel › Thrombin, subunit H › Bacteriophage SPP1 head-tail adaptor protein 0.65 52.0 5.34e-01 86.0% 100.0%
5cenA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.63 39.0 4.31e-01 90.0% 78.2%
2xxlA03 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.63 53.0 4.82e-01 90.0% 76.9%
2q9kA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.63 54.0 4.77e-01 99.0% 63.9%
5k9aA00 2.40.260.10 Mainly Beta › Beta Barrel › Sortase; Chain: A; › Sortase 0.61 54.0 4.23e-01 98.0% 63.7%
2kcaA00 2.40.10.270 Mainly Beta › Beta Barrel › Thrombin, subunit H › Bacteriophage SPP1 head-tail adaptor protein 0.60 49.0 4.81e-01 90.0% 92.7%
4f0qD01 2.30.280.20 Mainly Beta › Roll › PUA domain-like › 0.60 53.0 3.95e-01 97.0% 62.7%
5c94A00 2.40.10.250 Mainly Beta › Beta Barrel › Thrombin, subunit H › Replicase NSP9 0.57 43.0 4.08e-01 89.0% 68.1%
2hrvA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.56 42.0 4.32e-01 90.0% 83.2%
1qz8A01 2.40.10.250 Mainly Beta › Beta Barrel › Thrombin, subunit H › Replicase NSP9 0.56 42.0 4.21e-01 89.0% 77.1%
2fbjH02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.56 36.0 4.08e-01 76.0% 91.8%
1p38A01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.55 42.0 3.72e-01 90.0% 56.0%
1lp9E02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 35.0 3.80e-01 78.0% 80.0%
2ahmH02 3.30.70.3540 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Nsp8 replicase, head domain 0.54 44.0 4.62e-01 91.0% 93.5%
1txkB02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.54 43.0 4.16e-01 86.0% 93.9%
1d6uA03 2.70.98.20 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Copper amine oxidase, catalytic domain 0.54 39.0 2.66e-01 76.0% 87.1%
4hudA01 3.30.2000.40 Alpha Beta › 2-Layer Sandwich › STM4215-like › Myoviridae tail sheath stabiliser 0.54 48.0 3.80e-01 100.0% 87.6%
2rc5B01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.51 43.0 3.92e-01 96.0% 94.3%
3co8A01 2.40.37.10 Mainly Beta › Beta Barrel › Lyase, Ornithine Decarboxylase; Chain A, domain 1 › Lyase, Ornithine Decarboxylase; Chain A, domain 1 0.51 45.0 3.94e-01 98.0% 76.4%
3d2uA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 35.0 3.69e-01 80.0% 79.3%
1kcvL02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.50 40.0 4.02e-01 87.0% 90.3%
5gxuB01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.50 42.0 4.00e-01 94.0% 87.7%
ECOD (37)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4260208 1.1.13.62 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › PF27197 0.77 63.0 6.25e-01 86.0% 100.0%
3058418 1.1.13.2 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_attach 0.71 57.0 5.69e-01 90.0% 82.4%
4096792 1.1.5.10 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Flavin_Reduct 0.70 60.0 4.66e-01 92.0% 66.3%
4032883 1.1.13.3 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_H_T_join 0.69 58.0 5.73e-01 90.0% 95.2%
5038876 1.1.13.2 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_attach 0.68 57.0 5.99e-01 88.0% 97.8%
4606765 1.1.7.91 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF25940 0.67 50.0 4.82e-01 82.0% 70.0%
3943285 1.1.13.0 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.66 57.0 5.54e-01 91.0% 99.1%
3503759 1.1.5.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin 0.66 56.0 4.08e-01 92.0% 36.2%
2642578 1.1.13.3 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_H_T_join 0.66 56.0 5.46e-01 92.0% 94.5%
5082328 1.1.13.77 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_H_T_join_3 0.65 53.0 5.51e-01 87.0% 98.9%
4441129 1.1.7.91 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF25940 0.65 51.0 4.79e-01 82.0% 68.3%
3535347 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.65 52.0 4.98e-01 85.0% 86.1%
4062509 1.1.7.91 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF25940 0.65 49.0 4.90e-01 83.0% 77.1%
3504279 1.1.5.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin 0.64 54.0 4.05e-01 93.0% 41.2%
2101663 1.1.5.24 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Phage_T4_gp19 0.60 51.0 4.32e-01 92.0% 86.5%
4982501 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.60 42.0 4.33e-01 85.0% 76.8%
3533150 11.1.1.1108 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › CATSPERB_head 0.59 51.0 5.24e-01 96.0% 96.8%
3491307 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.59 42.0 3.82e-01 86.0% 53.6%
5022644 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.59 47.0 4.79e-01 94.0% 89.5%
5057186 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.59 48.0 5.03e-01 86.0% 97.8%
3504295 1.1.5.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin 0.58 48.0 4.16e-01 91.0% 61.3%
3976188 1.1.13.1 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_tube 0.58 49.0 4.15e-01 92.0% 76.4%
4633907 11.1.1.66 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › MdoG 0.58 46.0 4.45e-01 86.0% 93.0%
4395919 11.1.1.66 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › MdoG 0.57 46.0 4.27e-01 86.0% 94.4%
4616814 1.1.7.79 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Beta-barrel_RND 0.57 46.0 4.69e-01 87.0% 98.0%
4982153 1.1.5.0 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.56 46.0 3.46e-01 92.0% 49.3%
3622133 1.1.9.5 beta barrels › cradle loop barrel › RIFT-related › PUA domain › LON_substr_bdg 0.56 46.0 3.44e-01 97.0% 35.6%
3995934 389.4.1.0 few secondary structure elements › EGF-like › Fibulin-4 EGF-like 1 domain › Fibulin-4 EGF-like 1 domain 0.56 36.0 3.92e-01 95.0% 77.6%
4024866 304.102.1.4 a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › TruB_N 0.55 42.0 3.21e-01 82.0% 41.2%
3734384 319.1.1.1 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 0.53 40.0 4.02e-01 80.0% 89.3%
3442841 1.1.7.5 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Lum_binding 0.53 46.0 4.54e-01 93.0% 94.3%
4025315 319.1.1.0 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones 0.52 37.0 3.59e-01 73.0% 100.0%
3664223 319.1.1.0 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones 0.52 33.0 3.91e-01 77.0% 98.5%
5009575 11.1.5.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f 0.52 42.0 4.37e-01 88.0% 95.8%
3432350 206.1.1.0 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase 0.50 37.0 2.92e-01 78.0% 76.4%
4942056 11.4.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Antigen MPT63/MPB63 (immunoprotective extracellular protein) › Antigen MPT63/MPB63 (immunoprotective extracellular protein) 0.50 45.0 4.05e-01 100.0% 88.6%
3521712 109.6.1.1 alpha superhelices › Repetitive alpha hairpins › Ras GEF › Ras GEF › RasGEF 0.50 40.0 2.75e-01 86.0% 26.4%