←Back to structures

KT151959.1__ALA47997.1__SUNDANCE_181__00181

Bact-Vir

KT151959.1__ALA47997.1__SUNDANCE_181__00181

Identity

Accession:
KT151959 ↗
Kingdom:
phage

Quality

79.1 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Brevibacillus_phage_Sundance

TaxID: 1691958

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-69
PDB
Domain cluster: representative
CATH (24)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1twfI01 2.20.25.10 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › 0.71 40.0 4.74e-01 71.0% 82.6%
3ga8A00 3.10.20.860 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.70 56.0 5.71e-01 89.9% 100.0%
5umbA01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.63 43.0 3.16e-01 71.0% 68.5%
2lqkA00 2.40.10.170 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.60 41.0 4.09e-01 71.0% 74.3%
7t8tA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.58 41.0 3.29e-01 73.9% 87.0%
5vmzA01 3.30.160.60 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger 0.57 29.0 3.47e-01 71.0% 76.9%
2dixA01 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.57 38.0 3.72e-01 82.6% 61.5%
2i6tA02 3.90.110.10 Alpha Beta › Alpha-Beta Complex › L-2-Hydroxyisocaproate Dehydrogenase; Chain A, domain 2 › Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal 0.57 41.0 3.26e-01 78.3% 85.5%
7o06C01 3.30.1470.10 Alpha Beta › 2-Layer Sandwich › Photosystem 1 Reaction Centre Subunit Ii; Chain: D; › Photosystem I PsaD, reaction center subunit II 0.57 41.0 3.86e-01 79.7% 100.0%
1jkmA00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.56 49.0 3.13e-01 100.0% 95.5%
2xzm901 6.20.50.180 Special › Other non-globular › N-terminal domain of TfIIb › 0.54 34.0 3.43e-01 73.9% 62.5%
3fm8D03 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.54 38.0 3.31e-01 73.9% 91.7%
3lxrF00 1.10.4120.20 Mainly Alpha › Orthogonal Bundle › SopE-like GEF fold › 0.54 38.0 2.76e-01 73.9% 86.2%
1di2A00 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.53 33.0 3.34e-01 71.0% 59.4%
2qkdA01 2.20.25.420 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › ZPR1, zinc finger domain 0.53 34.0 4.00e-01 72.5% 93.8%
3tw8A01 3.30.450.200 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Longin module 0.52 42.0 3.39e-01 89.9% 83.3%
5mifA00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.52 45.0 2.98e-01 98.6% 100.0%
2eyqA05 2.40.10.170 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.52 33.0 3.51e-01 71.0% 76.3%
2opjA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.52 36.0 3.39e-01 73.9% 91.9%
2khxA00 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.51 31.0 3.06e-01 73.9% 51.9%
2rovA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.51 34.0 2.84e-01 75.4% 40.2%
3cpfA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.51 34.0 3.54e-01 71.0% 80.0%
2lt1A00 2.40.10.170 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.51 35.0 3.50e-01 75.4% 72.0%
2wzoA01 3.30.160.360 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.50 41.0 3.38e-01 92.8% 64.7%
ECOD (47)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5081200 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.83 66.0 7.08e-01 88.4% 98.3%
5061538 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.81 61.0 6.74e-01 84.1% 100.0%
5028346 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.78 63.0 6.75e-01 87.0% 100.0%
4993925 375.1.1.338 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › DUF7479 0.78 54.0 6.12e-01 78.3% 100.0%
5031242 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.76 61.0 6.51e-01 87.0% 100.0%
4966283 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.76 64.0 6.63e-01 95.7% 98.5%
4968450 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.76 55.0 5.97e-01 81.2% 96.4%
5030510 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.76 53.0 5.94e-01 81.2% 100.0%
4968137 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.75 56.0 6.05e-01 87.0% 100.0%
5061109 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.74 59.0 6.18e-01 89.9% 100.0%
3720866 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.73 46.0 4.78e-01 71.0% 67.7%
4947479 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.70 48.0 5.48e-01 76.8% 100.0%
4992532 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.70 54.0 5.72e-01 89.9% 100.0%
380878 375.1.1.55 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › MqsA_antitoxin 0.68 56.0 5.63e-01 94.2% 100.0%
4992806 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.67 50.0 5.43e-01 82.6% 100.0%
4956451 2007.1.14.19 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Chelatase-like › Mut7-C 0.66 46.0 3.49e-01 72.5% 32.9%
5072764 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.66 46.0 5.22e-01 72.5% 100.0%
4661366 375.1.1.271 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › YokU 0.65 52.0 5.17e-01 92.8% 89.3%
4998373 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.63 41.0 4.75e-01 73.9% 92.0%
5017692 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.62 44.0 4.07e-01 82.6% 57.8%
3833792 376.1.2.0 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain 0.62 42.0 3.79e-01 71.0% 56.8%
3609576 221.4.1.1 ↗ a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.58 39.0 2.77e-01 71.0% 85.3%
4971344 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.57 39.0 4.44e-01 72.5% 100.0%
5065631 4294.1.1.0 ↗ few secondary structure elements › Trm112p-like › Trm112p-like › Trm112p-like 0.57 41.0 4.24e-01 73.9% 96.9%
3516025 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.56 40.0 3.50e-01 75.4% 94.3%
4997648 375.1.1.21 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-ZPR1 0.55 35.0 4.07e-01 73.9% 92.0%
4990926 375.1.1.21 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-ZPR1 0.54 36.0 4.15e-01 73.9% 96.0%
3461850 150.1.1.88 ↗ alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin › PHD_Oberon 0.54 40.0 3.08e-01 81.2% 83.0%
2081413 4295.1.1.1 ↗ beta barrels › Acetoacetate decarboxylase-like › Acetoacetate decarboxylase-like › Acetoacetate decarboxylase-like › ADC 0.54 40.0 2.81e-01 82.6% 31.4%
5043504 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.54 36.0 4.10e-01 79.7% 98.0%
3217617 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.53 37.0 3.00e-01 72.5% 76.8%
3251857 220.1.1.8 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM 0.53 38.0 3.05e-01 75.4% 73.3%
4970648 375.1.1.21 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-ZPR1 0.52 36.0 4.10e-01 73.9% 98.0%
3788782 2004.1.1.199 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23,SbcC_Walker_B 0.52 36.0 2.17e-01 95.7% 9.7%
3170622 2004.1.1.199 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23,SbcC_Walker_B 0.52 38.0 2.12e-01 76.8% 6.6%
3594465 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.52 37.0 4.08e-01 72.5% 90.9%
3471264 375.10.1.3 ↗ few secondary structure elements › Rubredoxin-like › Zinc finger domain of DNA polymerase-alpha › Zinc finger domain of DNA polymerase-alpha › zf_DPOE_2 0.52 38.0 3.66e-01 78.3% 87.5%
3481273 330.1.1.0 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.52 35.0 3.07e-01 71.0% 70.5%
5050697 375.1.1.21 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-ZPR1 0.52 34.0 3.89e-01 78.3% 96.0%
5044597 375.1.1.21 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-ZPR1 0.51 35.0 3.89e-01 84.1% 100.0%
3538314 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.51 36.0 3.02e-01 73.9% 80.8%
168216 220.1.1.151 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_MRCK 0.51 34.0 2.84e-01 75.4% 40.2%
3954203 211.1.1.0 ↗ a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 0.51 37.0 3.68e-01 81.2% 84.0%
4952724 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.51 41.0 3.55e-01 98.6% 88.8%
3273866 207.1.1.0 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.51 41.0 2.47e-01 88.4% 20.2%
5079755 375.1.1.21 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-ZPR1 0.50 36.0 3.89e-01 91.3% 98.2%
3658860 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.50 37.0 2.62e-01 78.3% 35.5%