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KT187252.1__ALA07684.1__PBC6_091__00090

Bact-Vir

KT187252.1__ALA07684.1__PBC6_091__00090

Identity

Accession:
KT187252 ↗
Kingdom:
phage

Quality

80.0 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Herelleviridae› Tsarbombavirus› Bacillus_phage_PBC6

TaxID: 1673872

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 6-52
PDB
Domain cluster: representative
CATH (81)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2do3A01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.89 77.0 7.51e-01 100.0% 88.2%
2e70A00 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.88 76.0 6.58e-01 100.0% 63.4%
2ckkA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.86 77.0 7.45e-01 100.0% 94.3%
2ckkA02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.86 76.0 7.14e-01 100.0% 89.5%
4ytlA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.86 74.0 7.27e-01 100.0% 90.0%
1m1gB03 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.85 75.0 6.81e-01 100.0% 77.8%
3j7aF03 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.84 76.0 6.56e-01 100.0% 69.0%
3p8bB02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.83 73.0 6.68e-01 100.0% 79.0%
7oc3A01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.81 71.0 5.72e-01 100.0% 63.0%
2eqkA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.81 71.0 6.13e-01 100.0% 64.4%
4m4zA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.81 68.0 6.86e-01 95.7% 100.0%
2cudA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.80 70.0 5.94e-01 100.0% 69.6%
1vx7N01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.80 69.0 5.71e-01 100.0% 56.5%
2heqA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.80 69.0 6.69e-01 100.0% 98.1%
2rqtA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.79 67.0 6.25e-01 100.0% 93.4%
2eczA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.79 68.0 6.04e-01 100.0% 80.0%
2e6nA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.79 67.0 5.23e-01 100.0% 44.2%
2p4tA00 2.30.30.60 Mainly Beta › Roll › SH3 type barrels. › 0.79 70.0 6.55e-01 100.0% 84.5%
1vwxM01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.79 67.0 5.60e-01 100.0% 55.3%
6gbuD00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.78 67.0 6.16e-01 100.0% 92.2%
2d9tA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.78 68.0 6.75e-01 100.0% 98.0%
2fpeA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.78 67.0 6.18e-01 100.0% 90.3%
2egcA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.78 66.0 5.78e-01 100.0% 76.0%
4fssB00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.78 66.0 6.18e-01 100.0% 93.4%
2e6zA00 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.78 67.0 6.27e-01 100.0% 79.7%
3ntkA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.78 66.0 5.53e-01 100.0% 56.2%
1x6gA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.78 67.0 5.65e-01 100.0% 70.4%
1vq8T00 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.78 70.0 5.11e-01 100.0% 44.5%
4b9wA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.77 67.0 6.37e-01 100.0% 83.9%
1b7tA02 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.77 67.0 6.49e-01 100.0% 88.5%
1zuyA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.77 65.0 6.17e-01 100.0% 98.3%
7cfdA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.77 64.0 5.58e-01 100.0% 61.6%
6vlfA03 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.77 64.0 6.12e-01 100.0% 96.6%
1yn8A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.76 64.0 6.08e-01 100.0% 94.9%
6c6sD02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.76 65.0 6.06e-01 100.0% 80.0%
3i35A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.76 64.0 6.09e-01 100.0% 98.2%
3mp6A05 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.76 65.0 5.94e-01 100.0% 73.0%
3pieB05 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.76 64.0 5.87e-01 100.0% 84.4%
1wfwA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.76 64.0 5.60e-01 100.0% 81.1%
5kcoA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.75 64.0 6.00e-01 97.9% 79.7%
6uzjA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.75 64.0 5.89e-01 100.0% 88.9%
7k9cA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.75 63.0 5.30e-01 100.0% 57.0%
2diqA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.74 64.0 5.03e-01 100.0% 47.0%
4epcA01 2.30.30.170 Mainly Beta › Roll › SH3 type barrels. › 0.73 63.0 5.33e-01 100.0% 81.5%
5o99A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.73 61.0 5.79e-01 100.0% 90.0%
5i4eA01 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.73 58.0 5.87e-01 93.6% 91.3%
2ekhA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.73 62.0 5.29e-01 100.0% 67.5%
1ov3A02 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.72 61.0 5.85e-01 100.0% 98.2%
4fw1A02 2.30.30.10 Mainly Beta › Roll › SH3 type barrels. › Integrase, C-terminal domain superfamily, retroviral 0.71 60.0 5.80e-01 100.0% 85.2%
2ke9A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.71 59.0 5.39e-01 100.0% 91.0%
6bhdA03 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.71 60.0 5.50e-01 100.0% 73.0%
3nmzD00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.71 59.0 5.03e-01 100.0% 64.3%
2vb6A01 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.71 61.0 5.93e-01 100.0% 87.0%
6bioA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.70 56.0 5.37e-01 93.6% 100.0%
2ej9A02 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.70 57.0 5.72e-01 100.0% 91.8%
2ldmA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.70 59.0 5.71e-01 100.0% 92.5%
4f7uG00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.70 58.0 5.27e-01 100.0% 83.8%
2dmoA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.69 57.0 5.22e-01 100.0% 79.4%
2eifA02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.69 54.0 5.04e-01 87.2% 98.3%
3urgA02 2.30.30.530 Mainly Beta › Roll › SH3 type barrels. › Calcium binding protein CcbP, beta-barrel domain 0.69 58.0 5.35e-01 100.0% 92.1%
1ssfA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.68 57.0 5.53e-01 100.0% 85.5%
5mkiH00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.68 56.0 5.03e-01 100.0% 78.9%
1b34B00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.68 56.0 4.99e-01 100.0% 78.4%
2eayB02 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.67 54.0 5.40e-01 100.0% 89.8%
4xtvB02 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.66 53.0 5.28e-01 100.0% 91.7%
4dq2A03 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.65 53.0 5.35e-01 100.0% 97.9%
4a53A01 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.65 55.0 5.10e-01 100.0% 77.4%
7afrX02 2.30.30.180 Mainly Beta › Roll › SH3 type barrels. › Ribosome maturation factor RimP, C-terminal domain 0.65 54.0 5.12e-01 100.0% 81.7%
2c35B02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.64 47.0 3.88e-01 83.0% 98.9%
3e19B01 2.30.30.90 Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) 0.63 53.0 4.89e-01 100.0% 95.3%
2k57A00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.62 50.0 4.88e-01 97.9% 83.6%
1y5oA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.61 52.0 3.96e-01 100.0% 75.7%
1hxdA03 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.60 46.0 4.77e-01 97.9% 100.0%
1efzA00 3.20.20.105 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Queuine tRNA-ribosyltransferase-like 0.58 46.0 2.74e-01 89.4% 24.5%
1fouA02 2.40.500.10 Mainly Beta › Beta Barrel › Upper collar protein gp10 (connector protein) fold › Upper collar protein gp10 (connector protein) 0.57 44.0 3.47e-01 100.0% 47.7%
3dclA02 2.40.10.170 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.56 46.0 3.88e-01 100.0% 52.7%
4a0eA00 2.60.200.20 Mainly Beta › Sandwich › Tumour Suppressor Smad4 › 0.55 48.0 3.66e-01 100.0% 84.3%
1z1bA01 3.30.160.60 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger 0.53 38.0 3.61e-01 100.0% 64.9%
2lp6A00 2.40.10.190 Mainly Beta › Beta Barrel › Thrombin, subunit H › translation elongation factor selb, chain A, domain 4 0.52 43.0 3.63e-01 100.0% 51.6%
4g2sA00 2.60.200.20 Mainly Beta › Sandwich › Tumour Suppressor Smad4 › 0.51 45.0 3.49e-01 100.0% 92.5%
2y8nB02 2.20.70.100 Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › 0.51 38.0 3.90e-01 100.0% 93.2%
ECOD (100)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3820064 4.1.1.3 ↗ beta barrels › SH3 › SH3 › SH3 › KOW 0.90 79.0 6.56e-01 100.0% 57.5%
3924379 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.90 79.0 7.14e-01 100.0% 73.0%
3820066 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.88 78.0 7.23e-01 100.0% 86.7%
3756428 4.1.1.3 ↗ beta barrels › SH3 › SH3 › SH3 › KOW 0.88 79.0 6.09e-01 100.0% 47.0%
3555930 4.1.1.3 ↗ beta barrels › SH3 › SH3 › SH3 › KOW 0.88 79.0 6.87e-01 100.0% 67.1%
3256431 4.1.1.360 ↗ beta barrels › SH3 › SH3 › SH3 › KOW, G-patch_2 0.87 73.0 6.10e-01 97.9% 55.0%
3558774 4.1.1.104 ↗ beta barrels › SH3 › SH3 › SH3 › KN17_SH3 0.87 78.0 7.17e-01 100.0% 83.3%
3348456 4.1.1.322 ↗ beta barrels › SH3 › SH3 › SH3 › GPKOW_C 0.87 77.0 7.08e-01 100.0% 86.7%
3328489 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.86 78.0 6.76e-01 100.0% 68.6%
4938404 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.86 67.0 6.40e-01 100.0% 72.7%
3671396 4.1.1.316 ↗ beta barrels › SH3 › SH3 › SH3 › PUB62-63_C 0.86 76.0 6.58e-01 100.0% 69.9%
3819340 4.1.1.322 ↗ beta barrels › SH3 › SH3 › SH3 › GPKOW_C 0.86 76.0 5.57e-01 100.0% 43.3%
3264809 4.1.1.251 ↗ beta barrels › SH3 › SH3 › SH3 › KOW7_SPT5 0.86 74.0 7.10e-01 100.0% 83.6%
3820065 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.85 76.0 7.25e-01 100.0% 85.5%
3264806 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.85 70.0 6.89e-01 97.9% 86.0%
3703932 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.84 75.0 6.95e-01 100.0% 85.0%
3393436 4.1.1.12 ↗ beta barrels › SH3 › SH3 › SH3 › PWWP 0.84 74.0 5.54e-01 100.0% 41.8%
3482225 4.1.1.300 ↗ beta barrels › SH3 › SH3 › SH3 › KN17_SH3, SH3_KIN17_C 0.84 73.0 5.29e-01 100.0% 39.2%
5036498 4.1.1.3 ↗ beta barrels › SH3 › SH3 › SH3 › KOW 0.83 73.0 6.26e-01 100.0% 64.0%
4473115 4.1.1.5 ↗ beta barrels › SH3 › SH3 › SH3 › KOW,Ribosomal_L14e 0.83 70.0 5.46e-01 100.0% 45.0%
3624441 4.1.1.24 ↗ beta barrels › SH3 › SH3 › SH3 › Ribosomal_L14e 0.83 72.0 5.12e-01 100.0% 33.6%
2106277 4.1.1.24 ↗ beta barrels › SH3 › SH3 › SH3 › Ribosomal_L14e 0.83 71.0 5.25e-01 100.0% 37.9%
3849311 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.83 72.0 6.70e-01 100.0% 93.3%
3258767 4.1.1.24 ↗ beta barrels › SH3 › SH3 › SH3 › Ribosomal_L14e 0.82 72.0 5.01e-01 100.0% 31.3%
4261791 4.1.1.24 ↗ beta barrels › SH3 › SH3 › SH3 › Ribosomal_L14e 0.82 72.0 5.05e-01 100.0% 32.4%
3486326 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.82 72.0 6.84e-01 100.0% 87.3%
3313119 4.1.1.42 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet 0.82 70.0 5.85e-01 100.0% 56.2%
3930461 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.82 70.0 6.10e-01 100.0% 74.7%
3333322 4.1.1.42 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet 0.82 69.0 4.94e-01 100.0% 33.3%
3619813 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.82 70.0 5.27e-01 100.0% 40.0%
3592541 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.81 72.0 6.00e-01 100.0% 61.3%
3496659 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.81 72.0 6.66e-01 100.0% 78.3%
3920726 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.81 72.0 5.57e-01 100.0% 47.0%
3885049 4.1.1.3 ↗ beta barrels › SH3 › SH3 › SH3 › KOW 0.81 70.0 6.73e-01 100.0% 87.3%
3609031 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.81 71.0 5.56e-01 100.0% 49.0%
3778257 4.1.1.24 ↗ beta barrels › SH3 › SH3 › SH3 › Ribosomal_L14e 0.81 69.0 4.97e-01 100.0% 33.6%
3480822 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.81 72.0 7.07e-01 100.0% 94.0%
3547102 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.81 71.0 5.85e-01 100.0% 55.3%
3535268 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.81 71.0 5.63e-01 100.0% 49.5%
3768095 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.81 71.0 5.62e-01 100.0% 49.5%
3879068 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.80 71.0 5.81e-01 100.0% 55.3%
3429682 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.80 68.0 5.83e-01 100.0% 60.0%
3558926 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.80 68.0 5.56e-01 100.0% 51.1%
3397846 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.80 68.0 6.49e-01 100.0% 81.8%
3408592 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.80 67.0 5.27e-01 100.0% 45.0%
3486496 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.80 68.0 6.53e-01 100.0% 83.6%
4055256 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.80 68.0 5.54e-01 100.0% 51.1%
3890893 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.80 67.0 6.40e-01 95.7% 100.0%
3622055 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.80 67.0 5.55e-01 100.0% 52.9%
3231263 4.1.1.43 ↗ beta barrels › SH3 › SH3 › SH3 › SMN_Tudor 0.79 68.0 6.76e-01 100.0% 92.0%
3203654 601.16.1.12 ↗ alpha bundles › Four-helical up-and-down bundle › FAT domain of focal adhesion kinase › FAT domain of focal adhesion kinase › SH3_1 0.79 68.0 4.48e-01 100.0% 30.5%
3304627 4.1.1.42 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet 0.79 70.0 6.67e-01 100.0% 85.5%
3231177 4.1.1.333 ↗ beta barrels › SH3 › SH3 › SH3 › PF29330 0.79 66.0 6.47e-01 97.9% 88.0%
3881121 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.79 69.0 5.41e-01 100.0% 47.0%
4019491 601.16.1.7 ↗ alpha bundles › Four-helical up-and-down bundle › FAT domain of focal adhesion kinase › FAT domain of focal adhesion kinase › SH3_9 0.79 67.0 4.42e-01 100.0% 29.8%
3920026 4.1.1.101 ↗ beta barrels › SH3 › SH3 › SH3 › Tudor_2 0.79 66.0 4.30e-01 100.0% 21.4%
3881111 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.79 67.0 5.44e-01 100.0% 51.1%
3393360 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.79 66.0 4.99e-01 100.0% 39.1%
3180487 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.79 67.0 4.45e-01 100.0% 31.3%
3256498 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.79 68.0 6.48e-01 100.0% 83.6%
3612184 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.79 67.0 6.17e-01 100.0% 75.0%
3571064 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.79 68.0 5.66e-01 100.0% 58.8%
3665882 4.1.1.42 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet 0.78 69.0 4.95e-01 100.0% 37.8%
3629830 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.78 68.0 5.64e-01 100.0% 55.3%
3633434 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.78 67.0 5.98e-01 100.0% 80.0%
3515495 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.78 67.0 5.40e-01 100.0% 49.5%
3274551 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.78 68.0 5.89e-01 100.0% 62.7%
3275623 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.78 66.0 5.56e-01 100.0% 65.9%
3535298 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.78 68.0 5.50e-01 100.0% 53.3%
3395948 4.1.1.43 ↗ beta barrels › SH3 › SH3 › SH3 › SMN_Tudor 0.78 68.0 6.54e-01 100.0% 85.5%
3877478 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.78 66.0 5.22e-01 100.0% 46.0%
3407820 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.78 66.0 5.43e-01 100.0% 52.9%
3596676 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.78 68.0 5.51e-01 100.0% 52.2%
3581143 4.1.1.43 ↗ beta barrels › SH3 › SH3 › SH3 › SMN_Tudor 0.78 66.0 6.01e-01 100.0% 70.8%
3936926 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.78 67.0 6.04e-01 100.0% 70.8%
4171510 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.78 67.0 5.67e-01 100.0% 70.0%
3241793 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.78 66.0 5.14e-01 100.0% 43.8%
3507338 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.78 66.0 6.11e-01 100.0% 75.0%
4218142 4.1.1.101 ↗ beta barrels › SH3 › SH3 › SH3 › Tudor_2 0.78 65.0 5.12e-01 100.0% 45.0%
3501699 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.77 67.0 5.66e-01 100.0% 58.7%
3626694 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.77 64.0 5.25e-01 100.0% 50.0%
3407853 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.77 65.0 5.25e-01 100.0% 50.0%
3465976 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.77 64.0 5.80e-01 100.0% 69.2%
3846212 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.77 65.0 5.56e-01 100.0% 70.0%
3407827 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.77 65.0 5.36e-01 100.0% 52.9%
3475965 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.77 63.0 6.40e-01 97.9% 97.8%
3416133 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.76 64.0 5.63e-01 100.0% 74.7%
3592540 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.76 67.0 6.19e-01 100.0% 78.3%
3877938 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.76 66.0 5.36e-01 100.0% 52.2%
3931993 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.76 65.0 6.02e-01 100.0% 76.7%
4438733 4.1.1.178 ↗ beta barrels › SH3 › SH3 › SH3 › ribosomal_L24 0.75 66.0 5.10e-01 100.0% 61.0%
3706998 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.75 63.0 5.90e-01 100.0% 76.7%
3547089 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.74 63.0 5.17e-01 100.0% 52.2%
3224981 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.74 62.0 5.84e-01 100.0% 91.7%
3243143 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.72 61.0 5.58e-01 100.0% 80.0%
3816553 4.1.1.306 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_VIII-1_N 0.71 56.0 5.44e-01 95.7% 78.2%
3858885 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.68 57.0 5.49e-01 100.0% 92.7%
5027750 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.65 54.0 5.21e-01 100.0% 87.3%
3964033 4.1.1.28 ↗ beta barrels › SH3 › SH3 › SH3 › BPL_C 0.64 54.0 5.31e-01 100.0% 92.0%
3328891 4.1.1.296 ↗ beta barrels › SH3 › SH3 › SH3 › TDBD 0.63 53.0 4.85e-01 100.0% 95.4%
D2 high residues 62-118
PDB
Domain cluster: representative
CATH (32)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2kcoA01 2.40.10.310 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.68 55.0 5.04e-01 89.5% 94.7%
6my0A02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.67 48.0 4.68e-01 77.2% 70.8%
3pufL00 2.40.128.680 Mainly Beta › Beta Barrel › Lipocalin › 0.67 50.0 4.04e-01 82.5% 66.4%
4b0eD00 3.10.20.410 Alpha Beta › Roll › Ubiquitin-like (UB roll) › PapC, N-terminal domain 0.65 48.0 4.14e-01 84.2% 81.0%
1o70A02 2.30.180.10 Mainly Beta › Roll › FAS1 domain › FAS1 domain 0.65 46.0 3.44e-01 77.2% 71.2%
1qmyA00 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.65 41.0 3.08e-01 75.4% 23.7%
1io1A02 2.170.280.10 Mainly Beta › Beta Complex › f41 fragment of flagellin, middle domain › f41 fragment of flagellin, middle domain 0.62 52.0 4.07e-01 98.2% 68.7%
2dr3A00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.60 50.0 3.37e-01 93.0% 98.3%
8db3B02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.60 43.0 2.94e-01 77.2% 98.6%
5cxmA00 2.102.10.10 Mainly Beta › 3-layer Sandwich › Rieske Iron-sulfur Protein › Rieske [2Fe-2S] iron-sulphur domain 0.58 41.0 3.46e-01 75.4% 85.9%
3jzmA02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.58 49.0 3.25e-01 96.5% 91.1%
3vpbE00 2.20.28.160 Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › 0.57 46.0 4.68e-01 94.7% 98.2%
3nvqA01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.57 47.0 2.88e-01 100.0% 42.1%
1hcdA00 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.57 43.0 3.54e-01 86.0% 74.6%
4a2lF02 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.57 47.0 3.05e-01 100.0% 29.8%
2vrwB02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.57 47.0 3.81e-01 98.2% 88.4%
1iv8A02 3.30.1590.10 Alpha Beta › 2-Layer Sandwich › Maltooligosyl trehalose synthase, domain 2 › Maltooligosyl trehalose synthase, domain 2 0.56 38.0 3.09e-01 70.2% 47.5%
3bpqD00 3.30.2310.20 Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like 0.56 43.0 3.85e-01 87.7% 96.5%
2vseA05 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.56 42.0 3.30e-01 87.7% 70.4%
1itvA00 2.110.10.10 Mainly Beta › 4 Propeller › Hemopexin › Hemopexin-like domain 0.56 47.0 3.35e-01 100.0% 41.0%
2f09A00 2.40.128.200 Mainly Beta › Beta Barrel › Lipocalin › C-type lysozyme inhibitor 0.56 39.0 3.56e-01 86.0% 53.7%
1jeyB02 2.40.290.10 Mainly Beta › Beta Barrel › Ku70; Chain: A; Domain 2 › 0.55 44.0 3.17e-01 94.7% 87.1%
3v0aB04 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.55 42.0 3.20e-01 87.7% 53.2%
6ijfC01 3.90.1720.80 Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › 0.55 38.0 3.30e-01 75.4% 44.1%
7bwfA00 3.30.2310.20 Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like 0.54 41.0 3.70e-01 86.0% 97.7%
1v1pB02 2.40.50.110 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.54 40.0 3.84e-01 87.7% 81.1%
4gudB00 3.40.50.880 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Class I glutamine amidotransferase (GATase) domain 0.53 36.0 2.51e-01 70.2% 50.2%
1x3bA00 2.30.180.10 Mainly Beta › Roll › FAS1 domain › FAS1 domain 0.53 39.0 3.00e-01 80.7% 64.4%
4hs5A00 3.30.920.10 Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Frataxin/CyaY 0.52 39.0 3.22e-01 82.5% 63.8%
2rprA00 2.20.25.240 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › 0.51 41.0 3.65e-01 100.0% 59.8%
3aiiA03 2.40.240.10 Mainly Beta › Beta Barrel › Ribosomal Protein L25; Chain P › Ribosomal Protein L25; Chain P 0.51 43.0 3.83e-01 98.2% 89.9%
2i9wA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.50 40.0 2.99e-01 93.0% 75.6%
ECOD (43)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3936047 3153.1.1.0 ↗ a+b two layers › PipX › PipX › PipX 0.78 59.0 5.80e-01 100.0% 76.7%
5069956 2004.1.1.146 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase 0.67 51.0 3.36e-01 84.2% 86.9%
4986553 2004.1.1.146 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase 0.67 57.0 3.73e-01 94.7% 88.2%
5067650 2004.1.1.146 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase 0.66 51.0 3.35e-01 84.2% 94.3%
5055709 2004.1.1.146 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase 0.65 51.0 3.44e-01 86.0% 97.3%
3551130 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.65 47.0 3.58e-01 78.9% 55.0%
5002224 2004.1.1.146 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase 0.64 53.0 3.46e-01 94.7% 79.2%
4598583 239.3.1.1 ↗ beta barrels › Ribosomal protein L25-like › FAS1 domain › FAS1 domain › Fasciclin 0.64 46.0 3.31e-01 78.9% 61.7%
3253966 239.4.1.2 ↗ beta barrels › Ribosomal protein L25-like › Glutamine synthetase, N-terminal domain › Glutamine synthetase, N-terminal domain › GSIII_N 0.63 47.0 3.53e-01 82.5% 60.0%
5032659 2004.1.1.146 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase 0.61 50.0 3.28e-01 93.0% 93.2%
5067857 2004.1.1.146 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase 0.60 49.0 3.27e-01 93.0% 91.5%
3740340 59.1.1.0 ↗ beta complex topology › triple barrel › triple barrel › Rap30/74 interaction domains-like 0.60 44.0 4.05e-01 80.7% 95.0%
3993002 5.1.1.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 4-bladed 0.60 50.0 3.44e-01 96.5% 50.7%
3901670 5.1.1.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 4-bladed › Hemopexin 0.60 51.0 3.50e-01 100.0% 44.0%
5080208 4312.1.1.3 ↗ a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin 0.58 46.0 4.07e-01 93.0% 95.6%
4991342 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.57 42.0 2.93e-01 80.7% 91.0%
4585524 4312.1.1.3 ↗ a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin 0.56 46.0 4.09e-01 96.5% 97.8%
3650852 1.1.11.1 ↗ beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain › B3 0.56 41.0 3.35e-01 82.5% 52.5%
3649449 1.1.11.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain 0.56 42.0 3.33e-01 82.5% 52.0%
5080337 4312.1.1.3 ↗ a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin 0.56 44.0 3.94e-01 93.0% 96.6%
4940748 4312.1.1.3 ↗ a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin 0.56 44.0 3.99e-01 91.2% 95.2%
5069323 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.56 43.0 4.46e-01 91.2% 100.0%
3674876 1.1.11.1 ↗ beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain › B3 0.55 42.0 3.32e-01 87.7% 48.6%
3904065 239.3.1.1 ↗ beta barrels › Ribosomal protein L25-like › FAS1 domain › FAS1 domain › Fasciclin 0.55 40.0 3.17e-01 78.9% 70.4%
169853 4312.1.1.3 ↗ a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin 0.55 41.0 3.77e-01 87.7% 96.5%
4078246 9.4.1.1 ↗ beta barrels › Lipocalins/Streptavidin › D-aminopeptidase, middle and C-terminal domains › D-aminopeptidase, middle and C-terminal domains › DAP_B 0.55 40.0 3.79e-01 84.2% 84.0%
4968449 4312.1.1.15 ↗ a+b two layers › RelE-like › RelE-like › RelE-like › DUF4258 0.54 39.0 3.79e-01 91.2% 69.2%
4472148 60.1.2.1 ↗ beta barrels › SPOC domain-like › SPOC domain-related › Ku70/80 subunit middle domain › Ku 0.54 43.0 3.08e-01 96.5% 76.1%
4162129 60.1.2.2 ↗ beta barrels › SPOC domain-like › SPOC domain-related › Ku70/80 subunit middle domain › Ku,Ku_C 0.54 43.0 2.84e-01 94.7% 61.7%
3808531 5.1.4.550 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Kelch_FKB95 0.53 43.0 2.75e-01 93.0% 28.4%
5042309 4312.1.1.0 ↗ a+b two layers › RelE-like › RelE-like › RelE-like 0.53 46.0 4.00e-01 100.0% 86.7%
4190768 60.1.2.1 ↗ beta barrels › SPOC domain-like › SPOC domain-related › Ku70/80 subunit middle domain › Ku 0.53 42.0 2.91e-01 94.7% 64.1%
3511720 60.1.2.2 ↗ beta barrels › SPOC domain-like › SPOC domain-related › Ku70/80 subunit middle domain › Ku,Ku_C 0.53 43.0 2.81e-01 94.7% 61.4%
4324652 2004.1.1.159 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Mur_ligase_M 0.53 38.0 2.64e-01 78.9% 83.1%
3825394 239.3.1.0 ↗ beta barrels › Ribosomal protein L25-like › FAS1 domain › FAS1 domain 0.52 37.0 2.91e-01 80.7% 74.3%
3816337 375.13.1.1 ↗ few secondary structure elements › Rubredoxin-like › Mycobacterium tuberculosis Topoisomerase I C-terminal domain › Mycobacterium tuberculosis Topoisomerase I C-terminal domain › Toprim_C_rpt 0.52 39.0 3.97e-01 82.5% 94.4%
3696459 60.1.2.2 ↗ beta barrels › SPOC domain-like › SPOC domain-related › Ku70/80 subunit middle domain › Ku,Ku_C 0.51 40.0 2.72e-01 100.0% 57.6%
4966645 4312.1.1.15 ↗ a+b two layers › RelE-like › RelE-like › RelE-like › DUF4258 0.51 40.0 3.89e-01 94.7% 97.1%
3947987 2.1.1.220 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DUF3363 0.51 40.0 3.57e-01 93.0% 58.9%
4887382 375.1.1.66 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TOP1_ZnF 0.50 34.0 3.34e-01 70.2% 75.4%
5076246 2004.1.1.146 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase 0.50 39.0 2.75e-01 98.2% 98.0%
3708379 5.1.5.208 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › EMC1_C, PQQ_2, Beta-prop_EMC1_N 0.50 42.0 2.38e-01 100.0% 15.0%
3816093 2011.2.1.1 ↗ a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Peptidyl-tRNA hydrolase-like › Peptidyl-tRNA hydrolase-like › PNP_UDP_1 0.50 40.0 2.57e-01 93.0% 17.8%