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KT221034.1__ALF00182.1__SF3_510__00051

Bact-Vir

KT221034.1__ALF00182.1__SF3_510__00051

Identity

Accession:
KT221034 ↗
Kingdom:
phage

Quality

82.2 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Siftrevirus› Streptomyces_phage_SF3

TaxID: 1690818

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 78-145
PDB
Domain cluster: rep: OR263580.1__WNA15384.1__SAMYPH_53__00053__D116-181
CATH (26)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1df0A02 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.69 52.0 4.74e-01 82.4% 73.9%
2p84A02 2.30.30.290 Mainly Beta › Roll › SH3 type barrels. › YopX-like domains 0.67 51.0 5.03e-01 86.8% 76.7%
6e55A01 2.30.30.90 Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) 0.64 43.0 4.24e-01 70.6% 90.5%
4kbmB01 2.40.10.170 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.63 45.0 4.88e-01 77.9% 100.0%
2jiiA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.62 47.0 4.07e-01 83.8% 86.4%
2k5fA01 2.30.30.90 Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) 0.61 47.0 4.48e-01 85.3% 84.3%
3be3A00 2.30.30.320 Mainly Beta › Roll › SH3 type barrels. › DUF1653-like domain 0.60 47.0 4.60e-01 86.8% 90.8%
3b79A00 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.60 46.0 3.88e-01 86.8% 48.0%
2iz4A01 2.10.70.10 Mainly Beta › Ribbon › Complement Module; domain 1 › Complement Module, domain 1 0.59 35.0 3.93e-01 72.1% 79.6%
1pwaA00 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.57 43.0 3.66e-01 85.3% 87.0%
4x9cD00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.57 44.0 4.56e-01 86.8% 96.7%
6oqrA01 2.40.30.20 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.56 43.0 3.93e-01 83.8% 76.7%
3p8bB02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.56 42.0 4.35e-01 82.4% 95.2%
6bogA02 2.30.30.930 Mainly Beta › Roll › SH3 type barrels. › 0.55 39.0 4.07e-01 76.5% 91.7%
2ej9A02 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.55 37.0 4.06e-01 89.7% 100.0%
2cudA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.55 38.0 3.70e-01 73.5% 73.4%
4ld6A00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.55 45.0 3.95e-01 98.5% 85.5%
1w0pA01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.54 42.0 3.20e-01 86.8% 71.2%
4q28A00 3.30.160.780 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.54 43.0 3.64e-01 88.2% 53.6%
3tlqA00 3.20.20.450 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › EAL domain 0.52 36.0 2.52e-01 72.1% 24.6%
1yn8A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.52 36.0 3.84e-01 73.5% 96.6%
1lckA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.52 36.0 3.75e-01 72.1% 96.6%
5c3vA01 3.30.800.10 Alpha Beta › 2-Layer Sandwich › Phosphatidylinositol Phosphate Kinase II Beta › Phosphatidylinositol Phosphate Kinase II Beta 0.52 40.0 3.04e-01 83.8% 91.6%
1y5oA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.52 43.0 3.63e-01 92.6% 79.1%
3wa1A01 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.52 36.0 2.87e-01 73.5% 97.5%
1zuyA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.52 35.0 3.77e-01 72.1% 98.3%
ECOD (35)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4975150 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.68 51.0 5.34e-01 80.9% 91.7%
4994957 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.65 47.0 5.01e-01 88.2% 94.5%
5013892 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.65 47.0 5.10e-01 86.8% 98.2%
4972485 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.65 46.0 4.93e-01 76.5% 92.7%
5030535 4.1.1.40 ↗ beta barrels › SH3 › SH3 › SH3 › FeoA 0.64 46.0 4.54e-01 77.9% 93.3%
3676844 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.64 48.0 4.70e-01 82.4% 80.0%
3302818 4.1.1.236 ↗ beta barrels › SH3 › SH3 › SH3 › KOWx_SPT5 0.64 46.0 4.91e-01 88.2% 94.5%
4000403 4.1.1.28 ↗ beta barrels › SH3 › SH3 › SH3 › BPL_C 0.64 44.0 4.93e-01 91.2% 100.0%
3511278 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.64 49.0 4.95e-01 88.2% 82.9%
3660244 4.1.1.141 ↗ beta barrels › SH3 › SH3 › SH3 › PTM_DIR17_Tudor 0.63 46.0 4.45e-01 75.0% 70.7%
3634374 1.1.7.17 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.63 41.0 4.62e-01 77.9% 92.0%
5024154 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.62 43.0 4.09e-01 100.0% 58.8%
3300051 4.1.1.141 ↗ beta barrels › SH3 › SH3 › SH3 › PTM_DIR17_Tudor 0.62 47.0 4.62e-01 100.0% 76.0%
3749834 64.1.1.0 ↗ beta meanders › WW domain-like › WW domain › WW domain 0.62 43.0 4.74e-01 72.1% 89.1%
5046975 1.1.7.21 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RIBIOP_C 0.62 43.0 4.14e-01 100.0% 62.5%
3303889 4.1.1.141 ↗ beta barrels › SH3 › SH3 › SH3 › PTM_DIR17_Tudor 0.62 48.0 4.66e-01 85.3% 80.0%
2441971 4.1.1.40 ↗ beta barrels › SH3 › SH3 › SH3 › FeoA 0.61 47.0 4.57e-01 85.3% 89.9%
3570399 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.61 47.0 4.81e-01 88.2% 100.0%
4385345 4.1.1.175 ↗ beta barrels › SH3 › SH3 › SH3 › MSSS 0.60 41.0 4.53e-01 79.4% 100.0%
4668201 4.1.1.175 ↗ beta barrels › SH3 › SH3 › SH3 › MSSS 0.60 42.0 4.67e-01 80.9% 100.0%
3743614 4.1.1.28 ↗ beta barrels › SH3 › SH3 › SH3 › BPL_C 0.60 42.0 4.40e-01 73.5% 90.0%
5040422 4.1.1.40 ↗ beta barrels › SH3 › SH3 › SH3 › FeoA 0.59 45.0 4.39e-01 83.8% 93.3%
4403111 1.1.7.11 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RimM 0.59 47.0 4.21e-01 86.8% 66.3%
2499543 4.1.1.40 ↗ beta barrels › SH3 › SH3 › SH3 › FeoA 0.59 47.0 4.51e-01 89.7% 90.0%
4168653 4.1.1.111 ↗ beta barrels › SH3 › SH3 › SH3 › Tudor_RapA 0.59 40.0 4.38e-01 72.1% 100.0%
5001481 4.1.1.40 ↗ beta barrels › SH3 › SH3 › SH3 › FeoA 0.58 45.0 4.40e-01 85.3% 93.3%
3649175 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.58 41.0 2.59e-01 86.8% 13.7%
4284709 4.1.1.111 ↗ beta barrels › SH3 › SH3 › SH3 › Tudor_RapA 0.58 40.0 4.30e-01 73.5% 92.7%
3999968 391.1.1.0 ↗ few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module 0.58 35.0 4.04e-01 91.2% 100.0%
3702202 206.1.1.1 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.58 50.0 3.22e-01 98.5% 28.4%
4058919 4.1.1.175 ↗ beta barrels › SH3 › SH3 › SH3 › MSSS 0.57 39.0 4.27e-01 88.2% 100.0%
4581502 391.1.2.3 ↗ few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › VWC domain-related › SVWC 0.55 35.0 3.41e-01 72.1% 57.3%
4064793 1.1.7.11 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RimM 0.55 43.0 3.80e-01 85.3% 61.0%
1100 10.1.1.32 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Sial-lect-inser 0.53 41.0 3.03e-01 85.3% 65.5%
3225762 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.51 42.0 4.10e-01 95.6% 85.3%