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KT221034.1__ALF00216.1__SF3_860__00085

Bact-Vir

KT221034.1__ALF00216.1__SF3_860__00085

Identity

Accession:
KT221034 ↗
Kingdom:
phage

Quality

92.1 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Siftrevirus› Streptomyces_phage_SF3

TaxID: 1690818

Cluster

View cluster (3 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 5-97
PDB
Domain cluster: rep: MG214783.2__ATS92123.1__HMSP1_78__00077__D32-128
CATH (40)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5bkaE01 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.64 44.0 3.92e-01 87.1% 50.0%
2ckfB00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.63 42.0 3.43e-01 88.2% 37.1%
4wyqB00 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.62 38.0 4.14e-01 81.7% 74.7%
1jkgA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.62 44.0 3.86e-01 87.1% 49.6%
1iv0A00 3.30.420.140 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › YqgF/RNase H-like domain 0.61 33.0 3.27e-01 74.2% 48.0%
6a5gA01 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.60 44.0 3.92e-01 90.3% 53.7%
3gwrB00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.60 39.0 3.53e-01 88.2% 48.0%
3robA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.59 41.0 3.65e-01 87.1% 50.4%
3f7xA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.57 41.0 3.68e-01 87.1% 53.4%
3ub1A01 3.10.450.540 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.57 44.0 3.94e-01 93.5% 58.1%
2f1eA00 2.60.40.1470 Mainly Beta › Sandwich › Immunoglobulin-like › ApaG domain 0.56 39.0 3.67e-01 72.0% 79.3%
3hx8A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.56 39.0 3.56e-01 86.0% 53.1%
2hngA00 3.10.420.10 Alpha Beta › Roll › Bacterial Protein-export protein SecB › SecB-like 0.56 42.0 3.80e-01 79.6% 63.2%
2fxtA00 3.10.450.240 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.56 42.0 3.42e-01 82.8% 45.3%
3nqkA02 2.40.128.440 Mainly Beta › Beta Barrel › Lipocalin › Uncharacterised protein PF14274, DUF4361 0.55 40.0 3.37e-01 76.3% 63.7%
5n9bA01 2.60.40.2160 Mainly Beta › Sandwich › Immunoglobulin-like › Interleukin-17 receptor A/B, fibronectin-III-like domain 1 0.55 38.0 3.31e-01 71.0% 56.2%
1usuB00 3.15.10.20 Alpha Beta › Super Roll › Bactericidal permeability-increasing protein; domain 1 › Activator of Hsp90 ATPase Aha1, N-terminal domain 0.55 40.0 3.59e-01 87.1% 54.5%
1a90A00 3.10.450.10 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.54 41.0 4.00e-01 86.0% 71.3%
6qj2A00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.54 36.0 2.45e-01 96.8% 17.4%
4n4rB00 3.30.160.150 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Lipoprotein like domain 0.54 44.0 3.71e-01 86.0% 88.1%
1ocsA00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.54 40.0 3.59e-01 78.5% 77.3%
1se8A02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.54 38.0 3.60e-01 73.1% 74.8%
4k7rA02 2.20.200.10 Mainly Beta › Single Sheet › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) 0.54 39.0 4.18e-01 82.8% 90.9%
3ejvA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.54 42.0 3.52e-01 87.1% 49.1%
6ihjC00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.53 41.0 3.38e-01 88.2% 45.2%
6jqlA03 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.53 40.0 3.25e-01 79.6% 79.2%
2r76A00 3.30.160.150 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Lipoprotein like domain 0.53 42.0 3.76e-01 87.1% 83.3%
2vw9B00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.52 37.0 3.61e-01 74.2% 86.7%
2qtpA00 3.30.1330.110 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › BB2672 0.52 45.0 3.88e-01 95.7% 85.7%
3lh4A00 3.10.450.10 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.52 39.0 3.64e-01 88.2% 64.3%
2n8xA00 3.30.160.150 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Lipoprotein like domain 0.52 43.0 3.61e-01 92.5% 68.7%
4gb5A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.52 37.0 3.30e-01 88.2% 48.6%
1u5uA00 2.40.180.10 Mainly Beta › Beta Barrel › Catalase HpII, Chain A, domain 1 › Catalase core domain 0.52 46.0 3.09e-01 98.9% 69.4%
2oojA00 2.40.350.10 Mainly Beta › Beta Barrel › AOC barrel-like › SO1590-like 0.51 39.0 3.56e-01 94.6% 59.5%
3bf2A00 3.30.160.150 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Lipoprotein like domain 0.51 41.0 3.74e-01 89.2% 88.0%
1q40D00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.51 41.0 3.45e-01 92.5% 69.1%
5i97C00 3.10.450.230 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › VirB8 protein 0.50 38.0 3.41e-01 91.4% 55.5%
4ll1C02 2.60.40.640 Mainly Beta › Sandwich › Immunoglobulin-like › 0.50 43.0 3.81e-01 95.7% 89.3%
2bj0A00 2.70.170.10 Mainly Beta › Distorted Sandwich › Acetylcholine Binding Protein; Chain: A, › Neurotransmitter-gated ion-channel ligand-binding domain 0.50 37.0 2.94e-01 78.5% 65.5%
1es0A02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.50 39.0 3.83e-01 81.7% 84.8%
ECOD (38)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3492507 5.1.4.13 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › FG-GAP 0.61 54.0 3.35e-01 100.0% 25.7%
3642420 225.1.1.3 ↗ a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › HATPase_c 0.60 41.0 3.53e-01 71.0% 66.7%
4542150 243.1.1.44 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like › MBA1 0.60 47.0 3.65e-01 89.2% 38.0%
3384696 225.1.1.3 ↗ a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › HATPase_c 0.60 42.0 3.40e-01 72.0% 57.2%
4858377 9.13.1.5 ↗ beta barrels › Lipocalins/Streptavidin › AOC barrel-like › AOC barrel-like › AOC_like 0.60 42.0 4.19e-01 84.9% 71.3%
135742 243.1.1.18 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_2 0.60 42.0 3.75e-01 87.1% 50.0%
3513177 243.3.1.0 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.60 46.0 4.47e-01 86.0% 73.3%
3742354 243.1.1.5 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like › Tim44 0.59 46.0 3.68e-01 86.0% 46.7%
3562982 243.3.1.1 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › Cystatin 0.58 45.0 4.17e-01 87.1% 65.2%
3773175 883.1.1.1 ↗ a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like › LBP_BPI_CETP 0.58 47.0 3.74e-01 87.1% 44.9%
3169657 4099.1.1.47 ↗ a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › PF30282 0.58 49.0 4.58e-01 94.6% 75.7%
3514245 243.3.1.0 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.57 48.0 4.55e-01 98.9% 76.5%
3504130 243.3.1.0 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.57 49.0 4.61e-01 97.8% 80.9%
3356242 243.3.1.45 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › TIN1 0.57 43.0 4.26e-01 82.8% 81.0%
3183304 216.1.1.0 ↗ a+b two layers › UBC-like › UBC-like › UBC-like 0.57 48.0 4.20e-01 94.6% 75.2%
4445572 4099.1.1.22 ↗ a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › CENP-P 0.56 47.0 4.23e-01 94.6% 66.2%
3850124 223.2.1.4 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › DENN,uDENN 0.55 40.0 3.09e-01 75.3% 48.3%
3840079 4998.1.1.1 ↗ beta sandwiches › Flagellar hook protein flgE D2 domain-like › Flagellar hook protein flgE D2 domain › Flagellar hook protein flgE D2 domain › FlgE_D2 0.55 47.0 4.05e-01 94.6% 78.7%
3703305 243.1.1.86 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like › NTF2_MEX67 0.55 44.0 3.37e-01 88.2% 37.8%
4016816 243.3.1.0 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.54 43.0 4.53e-01 86.0% 96.5%
3937045 243.3.1.0 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.54 41.0 3.96e-01 83.9% 71.4%
3258070 295.1.1.4 ↗ a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › COMM_domain 0.54 39.0 4.06e-01 79.6% 81.2%
3965061 5084.3.1.1 ↗ beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter 0.54 42.0 3.13e-01 86.0% 89.2%
3496465 12.3.1.0 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich 0.54 47.0 3.32e-01 100.0% 60.6%
3694872 5.1.3.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.54 47.0 3.11e-01 100.0% 33.4%
3520975 243.3.1.0 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.54 40.0 3.96e-01 82.8% 74.0%
4540264 504.1.1.1 ↗ a+b two layers › Bacterial protein-export protein SecB › Bacterial protein-export protein SecB › Bacterial protein-export protein SecB › SecB 0.54 43.0 3.66e-01 86.0% 70.7%
6406 243.1.1.26 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_4 0.54 42.0 3.52e-01 87.1% 49.1%
3498103 5.1.5.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed 0.53 46.0 3.06e-01 98.9% 27.3%
3613616 5.1.4.39 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › ANAPC4_WD40 0.53 45.0 2.94e-01 94.6% 21.9%
3952161 504.1.1.0 ↗ a+b two layers › Bacterial protein-export protein SecB › Bacterial protein-export protein SecB › Bacterial protein-export protein SecB 0.52 42.0 3.48e-01 84.9% 64.4%
4953997 243.3.1.0 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.52 40.0 3.96e-01 88.2% 76.9%
3514330 295.1.1.0 ↗ a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain 0.52 46.0 4.53e-01 98.9% 98.0%
3488509 216.1.1.2 ↗ a+b two layers › UBC-like › UBC-like › UBC-like › Autophagy_act_C 0.52 45.0 3.59e-01 94.6% 62.8%
3692816 883.1.1.7 ↗ a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like › MMM1 0.52 45.0 3.32e-01 98.9% 58.8%
3522631 243.3.1.28 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › Spp-24 0.51 41.0 3.84e-01 88.2% 71.3%
3505113 243.3.1.0 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.51 43.0 4.10e-01 94.6% 79.6%
3587488 243.1.1.5 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like › Tim44 0.51 39.0 3.38e-01 93.5% 51.3%