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KT337343.1__ALH47427.1__phiARI0274_2__00002
Bact-VirKT337343.1__ALH47427.1__phiARI0274_2__00002
Identity
- Accession:
- KT337343 ↗
- Kingdom:
- phage
Quality
78.7
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-60
Domain cluster:
rep: KU981050.1__ANU78868.1__X__00018__D235-305
Pfam (5)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF19127.7 best | Choline_bind_3 | 40.1 | 3.80e-10 | 69.5% | 85.1% |
| PF19127.7 | Choline_bind_3 | 28.5 | 1.60e-06 | 33.9% | 42.5% |
| PF01473.27 | Choline_bind_1 | 23.8 | 5.80e-05 | 33.9% | 94.7% |
| PF01473.27 | Choline_bind_1 | 31.6 | 1.90e-07 | 32.2% | 100.0% |
| PF01473.27 | Choline_bind_1 | 28.7 | 1.60e-06 | 28.8% | 89.5% |
CATH (17)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2v05A02 | 2.10.270.10 | Mainly Beta › Ribbon › left handed beta-beta-3-solenoid › Cholin Binding | 0.97 | 91.0 | 6.23e-01 | 100.0% | 34.3% |
| 2j8gA02 | 2.10.270.10 | Mainly Beta › Ribbon › left handed beta-beta-3-solenoid › Cholin Binding | 0.96 | 89.0 | 7.78e-01 | 100.0% | 70.7% |
| 3klkA01 | 2.10.270.10 | Mainly Beta › Ribbon › left handed beta-beta-3-solenoid › Cholin Binding | 0.94 | 88.0 | 6.19e-01 | 100.0% | 40.4% |
| 2g7cB01 | 2.10.270.10 | Mainly Beta › Ribbon › left handed beta-beta-3-solenoid › Cholin Binding | 0.91 | 86.0 | 8.21e-01 | 100.0% | 89.4% |
| 3hiaA00 | 2.10.270.10 | Mainly Beta › Ribbon › left handed beta-beta-3-solenoid › Cholin Binding | 0.91 | 83.0 | 7.96e-01 | 100.0% | 87.9% |
| 7v1nA02 | 2.10.270.10 | Mainly Beta › Ribbon › left handed beta-beta-3-solenoid › Cholin Binding | 0.90 | 72.0 | 5.68e-01 | 88.1% | 44.2% |
| 2v05A01 | 2.10.270.20 | Mainly Beta › Ribbon › left handed beta-beta-3-solenoid › | 0.89 | 83.0 | 6.25e-01 | 100.0% | 60.9% |
| 6jyxA01 | 2.10.270.20 | Mainly Beta › Ribbon › left handed beta-beta-3-solenoid › | 0.88 | 83.0 | 6.26e-01 | 100.0% | 63.7% |
| 2g7cA02 | 2.10.270.10 | Mainly Beta › Ribbon › left handed beta-beta-3-solenoid › Cholin Binding | 0.86 | 76.0 | 6.52e-01 | 100.0% | 62.6% |
| 2qj6A01 | 2.10.270.10 | Mainly Beta › Ribbon › left handed beta-beta-3-solenoid › Cholin Binding | 0.83 | 76.0 | 5.72e-01 | 100.0% | 45.5% |
| 5ngyA01 | 2.10.270.10 | Mainly Beta › Ribbon › left handed beta-beta-3-solenoid › Cholin Binding | 0.80 | 73.0 | 5.97e-01 | 100.0% | 56.7% |
| 1u5mA01 | 2.10.70.10 | Mainly Beta › Ribbon › Complement Module; domain 1 › Complement Module, domain 1 | 0.59 | 34.0 | 3.97e-01 | 88.1% | 88.9% |
| 2bbuA00 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.57 | 39.0 | 2.90e-01 | 71.2% | 71.2% |
| 2iz4A01 | 2.10.70.10 | Mainly Beta › Ribbon › Complement Module; domain 1 › Complement Module, domain 1 | 0.53 | 37.0 | 3.99e-01 | 91.5% | 89.8% |
| 4lgcA00 | 3.40.50.12780 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › ANL, N-terminal domain | 0.53 | 39.0 | 2.46e-01 | 83.1% | 54.2% |
| 2mdiA00 | 2.20.70.10 | Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › | 0.52 | 38.0 | 3.91e-01 | 86.4% | 82.1% |
| 2fdbN00 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.50 | 44.0 | 3.31e-01 | 100.0% | 58.1% |
ECOD (56)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2266 | 702.1.1.9 ↗ | beta duplicates or obligate multimers › beta-hairpin stack › beta-hairpin stack › beta-hairpin stack › Choline_bind_1, Choline_bind_2, Choline_bind_3 | 1.00 | 95.0 | 6.02e-01 | 100.0% | 25.0% |
| 3989167 | 702.1.1.4 ↗ | beta duplicates or obligate multimers › beta-hairpin stack › beta-hairpin stack › beta-hairpin stack | 0.98 | 91.0 | 7.35e-01 | 100.0% | 57.0% |
| 3987354 | 702.1.1.4 ↗ | beta duplicates or obligate multimers › beta-hairpin stack › beta-hairpin stack › beta-hairpin stack | 0.97 | 89.0 | 7.50e-01 | 100.0% | 63.3% |
| 4792422 | 702.1.1.4 ↗ | beta duplicates or obligate multimers › beta-hairpin stack › beta-hairpin stack › beta-hairpin stack | 0.96 | 89.0 | 5.54e-01 | 100.0% | 22.2% |
| 4271349 | 702.1.1.4 ↗ | beta duplicates or obligate multimers › beta-hairpin stack › beta-hairpin stack › beta-hairpin stack | 0.96 | 88.0 | 5.50e-01 | 100.0% | 21.5% |
| 4135591 | 702.1.1.1 ↗ | beta duplicates or obligate multimers › beta-hairpin stack › beta-hairpin stack › beta-hairpin stack › Choline_bind_1 | 0.96 | 88.0 | 5.09e-01 | 100.0% | 13.1% |
| 1773021 | 702.1.1.4 ↗ | beta duplicates or obligate multimers › beta-hairpin stack › beta-hairpin stack › beta-hairpin stack | 0.96 | 90.0 | 5.48e-01 | 100.0% | 19.3% |
| 2265 | 702.1.1.4 ↗ | beta duplicates or obligate multimers › beta-hairpin stack › beta-hairpin stack › beta-hairpin stack | 0.96 | 89.0 | 6.35e-01 | 100.0% | 38.9% |
| 3987219 | 702.1.1.9 ↗ | beta duplicates or obligate multimers › beta-hairpin stack › beta-hairpin stack › beta-hairpin stack › Choline_bind_1, Choline_bind_2, Choline_bind_3 | 0.95 | 83.0 | 7.51e-01 | 94.9% | 72.0% |
| 4287737 | 702.1.1.4 ↗ | beta duplicates or obligate multimers › beta-hairpin stack › beta-hairpin stack › beta-hairpin stack | 0.95 | 89.0 | 5.39e-01 | 100.0% | 19.1% |
| 1292985 | 702.1.1.1 ↗ | beta duplicates or obligate multimers › beta-hairpin stack › beta-hairpin stack › beta-hairpin stack › Choline_bind_1 | 0.95 | 66.0 | 5.11e-01 | 76.3% | 36.8% |
| 4505171 | 702.1.1.4 ↗ | beta duplicates or obligate multimers › beta-hairpin stack › beta-hairpin stack › beta-hairpin stack | 0.95 | 88.0 | 5.22e-01 | 100.0% | 16.3% |
| 2905753 | 702.1.1.4 ↗ | beta duplicates or obligate multimers › beta-hairpin stack › beta-hairpin stack › beta-hairpin stack | 0.94 | 89.0 | 6.09e-01 | 100.0% | 33.9% |
| 4051792 | 702.1.1.4 ↗ | beta duplicates or obligate multimers › beta-hairpin stack › beta-hairpin stack › beta-hairpin stack | 0.94 | 88.0 | 7.04e-01 | 100.0% | 58.1% |
| 4446725 | 702.1.1.4 ↗ | beta duplicates or obligate multimers › beta-hairpin stack › beta-hairpin stack › beta-hairpin stack | 0.94 | 85.0 | 5.82e-01 | 100.0% | 32.6% |
| 4662378 | 1032.1.1.0 ↗ | alpha arrays › Toxin A (TcdA) helical domain › Toxin A (TcdA) helical domain › Toxin A (TcdA) helical domain | 0.94 | 89.0 | 4.78e-01 | 100.0% | 6.7% |
| 4596105 | 702.1.1.1 ↗ | beta duplicates or obligate multimers › beta-hairpin stack › beta-hairpin stack › beta-hairpin stack › Choline_bind_1 | 0.94 | 89.0 | 6.76e-01 | 100.0% | 50.0% |
| 4396385 | 702.1.1.0 ↗ | beta duplicates or obligate multimers › beta-hairpin stack › beta-hairpin stack › beta-hairpin stack | 0.93 | 88.0 | 5.07e-01 | 100.0% | 14.1% |
| 4591362 | 702.1.1.4 ↗ | beta duplicates or obligate multimers › beta-hairpin stack › beta-hairpin stack › beta-hairpin stack | 0.93 | 87.0 | 5.86e-01 | 100.0% | 32.1% |
| 4527800 | 1033.1.1.3 ↗ | beta duplicates or obligate multimers › Toxin A (TcdA) delivery domain › Toxin A (TcdA) delivery domain › Toxin A (TcdA) delivery domain › TcdA_TcdB_pore, PF30720 | 0.93 | 88.0 | 4.73e-01 | 100.0% | 6.7% |
| 3988987 | 702.1.1.3 ↗ | beta duplicates or obligate multimers › beta-hairpin stack › beta-hairpin stack › beta-hairpin stack › Choline_bind_1,Choline_bind_2 | 0.93 | 80.0 | 6.51e-01 | 100.0% | 54.0% |
| 369186 | 702.1.1.9 ↗ | beta duplicates or obligate multimers › beta-hairpin stack › beta-hairpin stack › beta-hairpin stack › Choline_bind_1, Choline_bind_2, Choline_bind_3 | 0.92 | 85.0 | 7.45e-01 | 100.0% | 69.9% |
| 4878265 | 702.1.1.4 ↗ | beta duplicates or obligate multimers › beta-hairpin stack › beta-hairpin stack › beta-hairpin stack | 0.92 | 87.0 | 6.69e-01 | 100.0% | 50.0% |
| 1292986 | 702.1.1.1 ↗ | beta duplicates or obligate multimers › beta-hairpin stack › beta-hairpin stack › beta-hairpin stack › Choline_bind_1 | 0.92 | 85.0 | 6.04e-01 | 100.0% | 37.4% |
| 4373799 | 702.1.1.4 ↗ | beta duplicates or obligate multimers › beta-hairpin stack › beta-hairpin stack › beta-hairpin stack | 0.92 | 86.0 | 5.01e-01 | 100.0% | 15.1% |
| 4878267 | 702.1.1.7 ↗ | beta duplicates or obligate multimers › beta-hairpin stack › beta-hairpin stack › beta-hairpin stack › Choline_bind_3 | 0.92 | 86.0 | 8.11e-01 | 100.0% | 85.5% |
| 1822971 | 702.1.1.4 ↗ | beta duplicates or obligate multimers › beta-hairpin stack › beta-hairpin stack › beta-hairpin stack | 0.91 | 85.0 | 5.13e-01 | 100.0% | 18.6% |
| 3987255 | 702.1.1.3 ↗ | beta duplicates or obligate multimers › beta-hairpin stack › beta-hairpin stack › beta-hairpin stack › Choline_bind_1,Choline_bind_2 | 0.90 | 84.0 | 5.37e-01 | 100.0% | 24.9% |
| 4578847 | 702.1.1.3 ↗ | beta duplicates or obligate multimers › beta-hairpin stack › beta-hairpin stack › beta-hairpin stack › Choline_bind_1,Choline_bind_2 | 0.90 | 84.0 | 5.01e-01 | 100.0% | 17.4% |
| 2531530 | 702.1.1.0 ↗ | beta duplicates or obligate multimers › beta-hairpin stack › beta-hairpin stack › beta-hairpin stack | 0.90 | 83.0 | 5.84e-01 | 100.0% | 41.1% |
| 2883161 | 702.1.1.3 ↗ | beta duplicates or obligate multimers › beta-hairpin stack › beta-hairpin stack › beta-hairpin stack › Choline_bind_1,Choline_bind_2 | 0.89 | 83.0 | 5.89e-01 | 100.0% | 38.4% |
| 3988985 | 702.1.1.3 ↗ | beta duplicates or obligate multimers › beta-hairpin stack › beta-hairpin stack › beta-hairpin stack › Choline_bind_1,Choline_bind_2 | 0.88 | 78.0 | 6.40e-01 | 98.3% | 56.0% |
| 1826876 | 702.1.1.3 ↗ | beta duplicates or obligate multimers › beta-hairpin stack › beta-hairpin stack › beta-hairpin stack › Choline_bind_1,Choline_bind_2 | 0.88 | 79.0 | 5.13e-01 | 100.0% | 24.9% |
| 1772988 | 702.1.1.7 ↗ | beta duplicates or obligate multimers › beta-hairpin stack › beta-hairpin stack › beta-hairpin stack › Choline_bind_3 | 0.86 | 78.0 | 5.34e-01 | 100.0% | 31.1% |
| 2905750 | 702.1.1.4 ↗ | beta duplicates or obligate multimers › beta-hairpin stack › beta-hairpin stack › beta-hairpin stack | 0.86 | 78.0 | 4.66e-01 | 100.0% | 15.6% |
| 4457120 | 702.1.1.7 ↗ | beta duplicates or obligate multimers › beta-hairpin stack › beta-hairpin stack › beta-hairpin stack › Choline_bind_3 | 0.85 | 77.0 | 6.10e-01 | 100.0% | 52.2% |
| 1140094 | 702.1.1.4 ↗ | beta duplicates or obligate multimers › beta-hairpin stack › beta-hairpin stack › beta-hairpin stack | 0.83 | 76.0 | 5.95e-01 | 100.0% | 57.6% |
| 2453130 | 702.1.1.4 ↗ | beta duplicates or obligate multimers › beta-hairpin stack › beta-hairpin stack › beta-hairpin stack | 0.82 | 74.0 | 4.79e-01 | 100.0% | 23.8% |
| 2125354 | 702.1.1.4 ↗ | beta duplicates or obligate multimers › beta-hairpin stack › beta-hairpin stack › beta-hairpin stack | 0.81 | 73.0 | 5.68e-01 | 100.0% | 47.6% |
| 4862614 | 702.1.1.0 ↗ | beta duplicates or obligate multimers › beta-hairpin stack › beta-hairpin stack › beta-hairpin stack | 0.81 | 69.0 | 6.51e-01 | 93.2% | 87.1% |
| 2138976 | 702.1.1.4 ↗ | beta duplicates or obligate multimers › beta-hairpin stack › beta-hairpin stack › beta-hairpin stack | 0.80 | 73.0 | 6.64e-01 | 100.0% | 76.6% |
| 4802915 | 702.1.1.4 ↗ | beta duplicates or obligate multimers › beta-hairpin stack › beta-hairpin stack › beta-hairpin stack | 0.80 | 71.0 | 6.60e-01 | 98.3% | 79.7% |
| 2527014 | 702.1.1.0 ↗ | beta duplicates or obligate multimers › beta-hairpin stack › beta-hairpin stack › beta-hairpin stack | 0.79 | 56.0 | 6.17e-01 | 89.8% | 93.6% |
| 3815764 | 1.1.1.19 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › Pol_BBD | 0.72 | 40.0 | 3.06e-01 | 98.3% | 25.6% |
| 2832526 | 702.1.1.1 ↗ | beta duplicates or obligate multimers › beta-hairpin stack › beta-hairpin stack › beta-hairpin stack › Choline_bind_1 | 0.69 | 58.0 | 4.69e-01 | 100.0% | 57.3% |
| 3759316 | 391.1.2.1 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › VWC domain-related › VWC | 0.66 | 38.0 | 4.35e-01 | 88.1% | 82.5% |
| 3245756 | 391.1.1.0 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module | 0.62 | 35.0 | 4.11e-01 | 84.7% | 91.4% |
| 3579517 | 391.1.1.0 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module | 0.60 | 36.0 | 4.04e-01 | 86.4% | 87.5% |
| 3580118 | 391.1.1.0 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module | 0.60 | 35.0 | 3.87e-01 | 86.4% | 75.6% |
| 4002738 | 391.1.2.0 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › VWC domain-related | 0.60 | 36.0 | 3.94e-01 | 86.4% | 77.8% |
| 4030765 | 378.1.1.11 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › Endonuclea_NS_2 | 0.59 | 43.0 | 3.04e-01 | 78.0% | 78.2% |
| 3584429 | 391.1.2.1 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › VWC domain-related › VWC | 0.56 | 42.0 | 3.30e-01 | 83.1% | 83.7% |
| 3941925 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.56 | 35.0 | 3.34e-01 | 89.8% | 51.4% |
| 4989084 | 284.4.1.0 ↗ | a+b two layers › FKBP-like › Archaeal FKBP insertion domain › Archaeal FKBP insertion domain | 0.53 | 37.0 | 3.74e-01 | 72.9% | 88.3% |
| 3405120 | 2007.1.2.4 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › ANF_receptor | 0.53 | 45.0 | 3.21e-01 | 100.0% | 50.3% |
| 3501824 | 537.1.1.0 ↗ | alpha arrays › BRCA2 helical domain › BRCA2 helical domain › BRCA2 helical domain | 0.50 | 39.0 | 2.90e-01 | 98.3% | 30.3% |
D2
medium
residues 63-70_145-200
Domain cluster:
rep: pre3_saliva_scaffold_7_prodigal-single.1__X__X__00108__D355-399
Pfam (3)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF19127.7 best | Choline_bind_3 | 39.5 | 6.10e-10 | 59.4% | 70.2% |
| PF01473.27 | Choline_bind_1 | 15.2 | 3.20e-02 | 32.8% | 68.4% |
| PF01473.27 | Choline_bind_1 | 26.6 | 7.50e-06 | 31.2% | 79.0% |