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KT337361.1__ALA47682.1__phiARI0598_2__00002
Bact-VirKT337361.1__ALA47682.1__phiARI0598_2__00002
Identity
- Accession:
- KT337361 ↗
- Kingdom:
- phage
Quality
86.6
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-61
Domain cluster:
rep: pre3_saliva_scaffold_7_prodigal-single.1__X__X__00108__D355-399
Pfam (3)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF19127.7 best | Choline_bind_3 | 30.8 | 3.00e-07 | 41.4% | 53.2% |
| PF01473.27 | Choline_bind_1 | 15.4 | 2.60e-02 | 36.2% | 68.4% |
| PF01473.27 | Choline_bind_1 | 24.4 | 3.80e-05 | 32.8% | 73.7% |
CATH (16)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3hiaA00 | 2.10.270.10 | Mainly Beta › Ribbon › left handed beta-beta-3-solenoid › Cholin Binding | 0.90 | 64.0 | 6.07e-01 | 79.3% | 65.2% |
| 2j8gA02 | 2.10.270.10 | Mainly Beta › Ribbon › left handed beta-beta-3-solenoid › Cholin Binding | 0.83 | 67.0 | 5.91e-01 | 100.0% | 61.0% |
| 2v05A02 | 2.10.270.10 | Mainly Beta › Ribbon › left handed beta-beta-3-solenoid › Cholin Binding | 0.80 | 62.0 | 4.37e-01 | 86.2% | 28.4% |
| 3klkA01 | 2.10.270.10 | Mainly Beta › Ribbon › left handed beta-beta-3-solenoid › Cholin Binding | 0.77 | 70.0 | 4.94e-01 | 100.0% | 35.4% |
| 2g7cA02 | 2.10.270.10 | Mainly Beta › Ribbon › left handed beta-beta-3-solenoid › Cholin Binding | 0.76 | 60.0 | 5.11e-01 | 100.0% | 53.8% |
| 4tvcA01 | 2.10.270.10 | Mainly Beta › Ribbon › left handed beta-beta-3-solenoid › Cholin Binding | 0.76 | 69.0 | 4.76e-01 | 100.0% | 51.6% |
| 2g7cB01 | 2.10.270.10 | Mainly Beta › Ribbon › left handed beta-beta-3-solenoid › Cholin Binding | 0.76 | 61.0 | 5.82e-01 | 86.2% | 77.3% |
| 6jyxA01 | 2.10.270.20 | Mainly Beta › Ribbon › left handed beta-beta-3-solenoid › | 0.73 | 66.0 | 5.08e-01 | 100.0% | 73.4% |
| 5ngyA01 | 2.10.270.10 | Mainly Beta › Ribbon › left handed beta-beta-3-solenoid › Cholin Binding | 0.70 | 56.0 | 4.69e-01 | 100.0% | 50.0% |
| 7v1nA02 | 2.10.270.10 | Mainly Beta › Ribbon › left handed beta-beta-3-solenoid › Cholin Binding | 0.67 | 59.0 | 4.74e-01 | 100.0% | 54.0% |
| 2v05A01 | 2.10.270.20 | Mainly Beta › Ribbon › left handed beta-beta-3-solenoid › | 0.65 | 57.0 | 4.44e-01 | 100.0% | 53.1% |
| 2qj6A01 | 2.10.270.10 | Mainly Beta › Ribbon › left handed beta-beta-3-solenoid › Cholin Binding | 0.62 | 52.0 | 4.04e-01 | 96.6% | 46.2% |
| 2dlxA01 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.54 | 39.0 | 3.21e-01 | 79.3% | 94.7% |
| 2xnjA01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.53 | 38.0 | 3.26e-01 | 79.3% | 61.5% |
| 2aaaA02 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.53 | 38.0 | 3.24e-01 | 77.6% | 68.6% |
| 1yu0A01 | 2.10.10.30 | Mainly Beta › Ribbon › Seminal Fluid Protein PDC-109 (Domain B) › | 0.52 | 33.0 | 3.48e-01 | 79.3% | 74.5% |
ECOD (34)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4287737 | 702.1.1.4 ↗ | beta duplicates or obligate multimers › beta-hairpin stack › beta-hairpin stack › beta-hairpin stack | 0.87 | 71.0 | 4.30e-01 | 86.2% | 16.6% |
| 4051792 | 702.1.1.4 ↗ | beta duplicates or obligate multimers › beta-hairpin stack › beta-hairpin stack › beta-hairpin stack | 0.87 | 69.0 | 5.54e-01 | 84.5% | 49.5% |
| 3988987 | 702.1.1.3 ↗ | beta duplicates or obligate multimers › beta-hairpin stack › beta-hairpin stack › beta-hairpin stack › Choline_bind_1,Choline_bind_2 | 0.85 | 64.0 | 5.23e-01 | 100.0% | 46.0% |
| 2883161 | 702.1.1.3 ↗ | beta duplicates or obligate multimers › beta-hairpin stack › beta-hairpin stack › beta-hairpin stack › Choline_bind_1,Choline_bind_2 | 0.81 | 68.0 | 4.87e-01 | 100.0% | 33.3% |
| 4591362 | 702.1.1.4 ↗ | beta duplicates or obligate multimers › beta-hairpin stack › beta-hairpin stack › beta-hairpin stack | 0.80 | 70.0 | 4.79e-01 | 100.0% | 28.9% |
| 4457120 | 702.1.1.7 ↗ | beta duplicates or obligate multimers › beta-hairpin stack › beta-hairpin stack › beta-hairpin stack › Choline_bind_3 | 0.80 | 69.0 | 5.40e-01 | 100.0% | 47.0% |
| 4373799 | 702.1.1.4 ↗ | beta duplicates or obligate multimers › beta-hairpin stack › beta-hairpin stack › beta-hairpin stack | 0.79 | 71.0 | 4.15e-01 | 96.6% | 20.2% |
| 3988985 | 702.1.1.3 ↗ | beta duplicates or obligate multimers › beta-hairpin stack › beta-hairpin stack › beta-hairpin stack › Choline_bind_1,Choline_bind_2 | 0.78 | 64.0 | 5.28e-01 | 100.0% | 51.0% |
| 4396385 | 702.1.1.0 ↗ | beta duplicates or obligate multimers › beta-hairpin stack › beta-hairpin stack › beta-hairpin stack | 0.77 | 68.0 | 3.99e-01 | 96.6% | 19.8% |
| 4505171 | 702.1.1.4 ↗ | beta duplicates or obligate multimers › beta-hairpin stack › beta-hairpin stack › beta-hairpin stack | 0.76 | 68.0 | 4.10e-01 | 98.3% | 23.7% |
| 1826876 | 702.1.1.3 ↗ | beta duplicates or obligate multimers › beta-hairpin stack › beta-hairpin stack › beta-hairpin stack › Choline_bind_1,Choline_bind_2 | 0.75 | 63.0 | 4.09e-01 | 89.7% | 33.2% |
| 2905753 | 702.1.1.4 ↗ | beta duplicates or obligate multimers › beta-hairpin stack › beta-hairpin stack › beta-hairpin stack | 0.74 | 66.0 | 4.61e-01 | 98.3% | 50.0% |
| 1772988 | 702.1.1.7 ↗ | beta duplicates or obligate multimers › beta-hairpin stack › beta-hairpin stack › beta-hairpin stack › Choline_bind_3 | 0.73 | 66.0 | 4.51e-01 | 100.0% | 54.7% |
| 1292986 | 702.1.1.1 ↗ | beta duplicates or obligate multimers › beta-hairpin stack › beta-hairpin stack › beta-hairpin stack › Choline_bind_1 | 0.71 | 63.0 | 4.60e-01 | 98.3% | 56.8% |
| 4514947 | 1032.1.1.0 ↗ | alpha arrays › Toxin A (TcdA) helical domain › Toxin A (TcdA) helical domain › Toxin A (TcdA) helical domain | 0.70 | 54.0 | 2.95e-01 | 86.2% | 5.0% |
| 4135591 | 702.1.1.1 ↗ | beta duplicates or obligate multimers › beta-hairpin stack › beta-hairpin stack › beta-hairpin stack › Choline_bind_1 | 0.70 | 62.0 | 3.66e-01 | 98.3% | 17.9% |
| 2905750 | 702.1.1.4 ↗ | beta duplicates or obligate multimers › beta-hairpin stack › beta-hairpin stack › beta-hairpin stack | 0.69 | 62.0 | 3.74e-01 | 100.0% | 16.7% |
| 1390488 | 702.1.1.4 ↗ | beta duplicates or obligate multimers › beta-hairpin stack › beta-hairpin stack › beta-hairpin stack | 0.68 | 48.0 | 5.10e-01 | 75.9% | 86.0% |
| 4593895 | 375.8.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Zinc-binding domain of translation initiation factor 2 beta › Zinc-binding domain of translation initiation factor 2 beta | 0.68 | 32.0 | 4.07e-01 | 75.9% | 96.0% |
| 3233229 | 391.1.1.0 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module | 0.65 | 38.0 | 4.31e-01 | 82.8% | 82.5% |
| 3532309 | 391.1.1.5 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module › TILa | 0.61 | 36.0 | 3.58e-01 | 77.6% | 55.0% |
| 3755669 | 391.1.1.5 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module › TILa | 0.61 | 36.0 | 4.03e-01 | 79.3% | 82.5% |
| 4198047 | 391.1.1.5 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module › TILa | 0.60 | 36.0 | 4.00e-01 | 77.6% | 82.5% |
| 3893051 | 391.1.1.5 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module › TILa | 0.60 | 35.0 | 4.03e-01 | 77.6% | 91.4% |
| 4539369 | 391.1.1.5 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module › TILa | 0.58 | 35.0 | 3.62e-01 | 77.6% | 61.8% |
| 3852171 | 391.1.1.5 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module › TILa | 0.57 | 34.0 | 3.80e-01 | 77.6% | 82.5% |
| 1105421 | 12.1.1.14 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › A_amylase_dom_C | 0.56 | 40.0 | 3.44e-01 | 77.6% | 52.1% |
| 3935301 | 391.1.2.11 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › VWC domain-related › VWC2L_2nd | 0.54 | 34.0 | 3.54e-01 | 82.8% | 67.3% |
| 5058895 | 11.1.4.23 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › CarboxypepD_reg | 0.54 | 36.0 | 3.47e-01 | 72.4% | 57.1% |
| 3625627 | 391.1.2.9 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › VWC domain-related › Fn1_2 | 0.54 | 39.0 | 3.26e-01 | 79.3% | 58.2% |
| 1349153 | 5.1.11.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 9-bladed › eIF2A | 0.51 | 42.0 | 2.51e-01 | 93.1% | 27.2% |
| 3209383 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.51 | 37.0 | 2.63e-01 | 82.8% | 65.8% |
| 3231088 | 391.1.1.0 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module | 0.51 | 33.0 | 3.63e-01 | 79.3% | 92.5% |
| 3565842 | 391.1.2.17 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › VWC domain-related › VWC, VWC2L_2nd | 0.51 | 34.0 | 2.78e-01 | 70.7% | 44.3% |