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KT588075.2__ALJ99130.1__Ab1052phi_35__00035
Bact-VirKT588075.2__ALJ99130.1__Ab1052phi_35__00035
Identity
- Accession:
- KT588075 ↗
- Kingdom:
- phage
Quality
88.8
mean pLDDT
Taxonomy
TaxID: 1718841
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-99
Domain cluster:
representative
CATH (32)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4zm3B01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.70 | 50.0 | 4.32e-01 | 72.9% | 72.5% |
| 4hs5A00 | 3.30.920.10 | Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Frataxin/CyaY | 0.70 | 49.0 | 4.79e-01 | 72.9% | 84.8% |
| 4jpdA00 | 3.30.920.10 | Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Frataxin/CyaY | 0.69 | 49.0 | 4.69e-01 | 72.9% | 83.5% |
| 3l44A01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.68 | 48.0 | 3.86e-01 | 72.9% | 56.3% |
| 2epjA01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.66 | 46.0 | 3.82e-01 | 74.0% | 60.8% |
| 1dq3A02 | 3.30.160.90 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.65 | 39.0 | 4.26e-01 | 90.6% | 73.7% |
| 3l1nA01 | 6.10.140.790 | Special › Helix non-globular › Helix Hairpins › | 0.64 | 33.0 | 4.49e-01 | 100.0% | 96.1% |
| 3igfA02 | 2.60.40.790 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.63 | 35.0 | 3.96e-01 | 76.0% | 70.3% |
| 4e6nA02 | 6.10.140.1010 | Special › Helix non-globular › Helix Hairpins › | 0.61 | 33.0 | 3.88e-01 | 88.5% | 75.8% |
| 4h5bA00 | 3.30.1460.70 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.60 | 42.0 | 3.63e-01 | 71.9% | 82.9% |
| 3h1tA01 | 3.90.1570.30 | Alpha Beta › Alpha-Beta Complex › tt1808, chain A › | 0.59 | 42.0 | 3.79e-01 | 75.0% | 95.6% |
| 1b12A02 | 2.170.230.10 | Mainly Beta › Beta Complex › Signal Peptidase I; Chain: A, domain 2 › | 0.57 | 37.0 | 4.12e-01 | 80.2% | 85.1% |
| 1yqeA01 | 3.40.630.50 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › AF0625-like | 0.57 | 39.0 | 3.24e-01 | 71.9% | 91.9% |
| 2zdiB00 | 1.10.287.370 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.56 | 36.0 | 3.49e-01 | 91.7% | 57.5% |
| 2ywlA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.56 | 38.0 | 3.19e-01 | 71.9% | 94.8% |
| 2ea9A01 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.55 | 35.0 | 3.62e-01 | 93.8% | 66.0% |
| 6d0aA03 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.55 | 39.0 | 3.71e-01 | 74.0% | 87.8% |
| 6iy8A01 | 3.30.1380.20 | Alpha Beta › 2-Layer Sandwich › Muramoyl-pentapeptide Carboxypeptidase; domain 2 › Trafficking protein particle complex subunit 3 | 0.55 | 48.0 | 3.93e-01 | 100.0% | 63.0% |
| 3ju8A01 | 3.40.605.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 | 0.55 | 44.0 | 3.19e-01 | 88.5% | 72.4% |
| 1a41A02 | 1.20.120.380 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Type 1-topoisomerase catalytic fragment, domain 2 | 0.54 | 44.0 | 4.47e-01 | 88.5% | 96.8% |
| 2m4eA00 | 1.20.120.1930 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Uncharacterised protein PF16691 family | 0.54 | 36.0 | 3.82e-01 | 94.8% | 76.7% |
| 4a17E01 | 3.90.930.12 | Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › Ribosomal protein L6 | 0.54 | 39.0 | 4.16e-01 | 87.5% | 88.2% |
| 2fd5A02 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.53 | 38.0 | 3.43e-01 | 74.0% | 95.5% |
| 3drwB01 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.53 | 46.0 | 3.24e-01 | 100.0% | 96.4% |
| 1vx7H01 | 3.90.930.12 | Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › Ribosomal protein L6 | 0.53 | 39.0 | 4.15e-01 | 87.5% | 89.4% |
| 5mmiG01 | 3.90.930.12 | Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › Ribosomal protein L6 | 0.52 | 41.0 | 4.32e-01 | 92.7% | 96.4% |
| 5gaeG01 | 3.90.930.12 | Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › Ribosomal protein L6 | 0.52 | 40.0 | 4.29e-01 | 90.6% | 98.8% |
| 3js6A01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.51 | 43.0 | 3.47e-01 | 95.8% | 89.1% |
| 3aabB00 | 2.60.40.790 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.51 | 31.0 | 3.00e-01 | 96.9% | 52.8% |
| 5zx8A00 | 3.40.50.1470 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Peptidyl-tRNA hydrolase | 0.51 | 38.0 | 3.13e-01 | 80.2% | 81.2% |
| 7pluA01 | 1.20.58.530 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.51 | 38.0 | 3.64e-01 | 83.3% | 68.1% |
| 2dk6A01 | 3.30.720.50 | Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › | 0.50 | 33.0 | 3.37e-01 | 80.2% | 67.0% |
ECOD (42)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5069592 | 873.1.1.19 ↗ | a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain › MetOD1 | 0.81 | 59.0 | 5.22e-01 | 76.0% | 94.8% |
| 4971929 | 873.1.1.0 ↗ | a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain | 0.74 | 53.0 | 4.38e-01 | 74.0% | 69.1% |
| 3992641 | 331.4.1.9 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 › CPSF73-100_C | 0.73 | 45.0 | 5.22e-01 | 70.8% | 85.7% |
| 4939124 | 873.1.1.19 ↗ | a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain › MetOD1 | 0.70 | 49.0 | 4.25e-01 | 74.0% | 86.7% |
| 4978826 | 873.1.1.18 ↗ | a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain › HTH_24 | 0.69 | 50.0 | 3.80e-01 | 75.0% | 52.5% |
| 5046861 | 873.1.1.0 ↗ | a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain | 0.69 | 50.0 | 4.20e-01 | 76.0% | 73.6% |
| 4954638 | 241.9.1.2 ↗ | a+b two layers › Type III secretory system chaperone-like › YdhG-like › YdhG-like › DUF5655 | 0.69 | 48.0 | 4.58e-01 | 72.9% | 91.2% |
| 4954912 | 873.1.1.1 ↗ | a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain › V4R | 0.68 | 50.0 | 4.15e-01 | 78.1% | 69.1% |
| 4453958 | 274.1.1.23 ↗ | a+b two layers › Pili subunits › Pili subunits › Pili subunits › DUF5374 | 0.65 | 37.0 | 4.51e-01 | 96.9% | 88.3% |
| 4992470 | 896.1.1.0 ↗ | a+b two layers › SRP9/14-like › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Signal recognition particle alu RNA binding heterodimer SRP9/14-related | 0.65 | 30.0 | 3.73e-01 | 70.8% | 70.0% |
| 4986012 | 101.1.2.14 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_5 | 0.64 | 48.0 | 3.68e-01 | 78.1% | 51.0% |
| 3386843 | 4263.2.1.0 ↗ | a+b two layers › TTHA1528-like › FtsH Periplasmic Domain › FtsH Periplasmic Domain | 0.63 | 28.0 | 3.45e-01 | 70.8% | 65.0% |
| 4960634 | 3755.3.1.127 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › NFACT_N | 0.63 | 39.0 | 3.31e-01 | 96.9% | 38.7% |
| 3706686 | 4263.2.1.0 ↗ | a+b two layers › TTHA1528-like › FtsH Periplasmic Domain › FtsH Periplasmic Domain | 0.60 | 28.0 | 3.33e-01 | 77.1% | 64.6% |
| 4560753 | 212.1.1.0 ↗ | a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like | 0.60 | 42.0 | 3.97e-01 | 72.9% | 75.7% |
| 3403782 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.59 | 37.0 | 4.42e-01 | 89.6% | 95.4% |
| 5051446 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.58 | 38.0 | 3.39e-01 | 97.9% | 45.7% |
| 3894482 | 314.1.1.0 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases | 0.58 | 51.0 | 3.71e-01 | 100.0% | 78.9% |
| 3569168 | 3164.1.1.2 ↗ | few secondary structure elements › Zinc-binding domain in Junin virus envelope glycoprotein › Zinc-binding domain in Junin virus envelope glycoprotein › Zinc-binding domain in Junin virus envelope glycoprotein › SWIM | 0.57 | 36.0 | 3.86e-01 | 97.9% | 72.9% |
| 4942349 | 274.1.1.0 ↗ | a+b two layers › Pili subunits › Pili subunits › Pili subunits | 0.57 | 36.0 | 3.59e-01 | 96.9% | 61.6% |
| 5030534 | 319.1.1.0 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones | 0.57 | 32.0 | 3.56e-01 | 72.9% | 69.3% |
| 4323652 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.57 | 37.0 | 3.60e-01 | 89.6% | 59.0% |
| 3248113 | 219.1.1.6 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Acetyltransf_2 | 0.56 | 46.0 | 3.46e-01 | 93.8% | 60.2% |
| 5074483 | 873.1.1.20 ↗ | a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain › DUF6125 | 0.56 | 49.0 | 4.22e-01 | 99.0% | 72.5% |
| 3214098 | 330.1.1.24 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › Paxt-1_C | 0.56 | 40.0 | 3.83e-01 | 99.0% | 63.7% |
| 5027713 | 873.1.1.0 ↗ | a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain | 0.56 | 50.0 | 3.96e-01 | 100.0% | 67.5% |
| 4567314 | 2004.1.1.17 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Myosin_head | 0.55 | 48.0 | 2.91e-01 | 100.0% | 87.5% |
| 3601791 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.54 | 44.0 | 2.58e-01 | 88.5% | 15.9% |
| 5056053 | 274.1.1.0 ↗ | a+b two layers › Pili subunits › Pili subunits › Pili subunits | 0.54 | 35.0 | 3.21e-01 | 94.8% | 50.4% |
| 4929462 | 873.1.1.0 ↗ | a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain | 0.53 | 46.0 | 4.41e-01 | 97.9% | 82.6% |
| 5062211 | 3740.1.1.4 ↗ | alpha arrays › F420-reducing hydrogenase subunit beta › F420-reducing hydrogenase subunit beta › F420-reducing hydrogenase subunit beta › FrhB_FdhB_C | 0.53 | 37.0 | 2.99e-01 | 72.9% | 69.5% |
| 4027266 | 3291.1.1.0 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related | 0.53 | 37.0 | 3.26e-01 | 97.9% | 47.2% |
| 4931058 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.53 | 36.0 | 3.02e-01 | 97.9% | 38.2% |
| 3580596 | 330.1.1.17 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm_Ferlin | 0.53 | 42.0 | 3.88e-01 | 84.4% | 89.2% |
| 5045441 | 192.2.1.88 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › NFACT_N | 0.53 | 35.0 | 3.01e-01 | 97.9% | 38.8% |
| 4964968 | 192.2.1.88 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › NFACT_N | 0.53 | 35.0 | 3.05e-01 | 97.9% | 41.2% |
| 4948475 | 873.1.1.0 ↗ | a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain | 0.51 | 45.0 | 4.04e-01 | 100.0% | 76.8% |
| 3519113 | 330.1.1.24 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › Paxt-1_C | 0.51 | 38.0 | 3.71e-01 | 99.0% | 70.9% |
| 3268750 | 316.1.1.56 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › PF26128 | 0.50 | 41.0 | 3.41e-01 | 89.6% | 75.4% |
| 4927597 | 873.1.1.0 ↗ | a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain | 0.50 | 43.0 | 4.00e-01 | 100.0% | 76.0% |
| 3195886 | 316.1.1.56 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › PF26128 | 0.50 | 41.0 | 2.88e-01 | 92.7% | 40.0% |
| 2757971 | 4963.1.2.1 ↗ | alpha complex topology › N-terminal additional helical subdomain in reovirus polymerase lambda3 › N-terminal additional helical subdomain in reovirus polymerase lambda3 › N-terminal domain in vesicular stomatitis virus RNA polymerase L › Mononeg_RNA_pol | 0.50 | 44.0 | 2.96e-01 | 96.9% | 29.9% |