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KT624200.1__AMM44981.1__SP15_183__00183

Bact-Vir

KT624200.1__AMM44981.1__SP15_183__00183

Identity

Accession:
KT624200 ↗
Kingdom:
phage

Quality

97.2 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Thornevirus› Bacillus_phage_SP-15

TaxID: 1792032

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-70
PDB
Domain cluster: representative
Pfam (2)
AccessionNameScoreE-valueQ covHMM cov
PF13459.12 best Fer4_15 39.5 1.00e-09 94.1% 95.5%
PF13370.12 Fer4_13 53.8 3.60e-14 92.7% 96.5%
CATH (20)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4id8A00 3.30.70.20 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.95 84.0 8.65e-01 100.0% 96.9%
1vjwA00 3.30.70.20 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.94 78.0 8.32e-01 100.0% 100.0%
8amqA01 3.30.70.20 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.89 74.0 7.79e-01 97.1% 100.0%
1fxrA00 3.30.70.20 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.89 76.0 7.84e-01 100.0% 95.3%
8oh9B05 3.30.70.20 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.80 63.0 6.62e-01 98.5% 95.0%
5c4iB02 3.30.70.20 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.79 61.0 6.41e-01 100.0% 93.4%
1bluA00 3.30.70.20 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.76 63.0 5.98e-01 98.5% 76.2%
6tmfd01 3.30.70.20 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.71 65.0 6.47e-01 100.0% 98.6%
1ti6B02 3.30.70.20 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.71 47.0 5.02e-01 86.8% 82.5%
3jsyA02 3.90.105.20 Alpha Beta › Alpha-Beta Complex › Molybdopterin biosynthesis moea protein, domain 2 › Ribosomal protein L10, N-terminal fragment, domain II 0.57 45.0 4.35e-01 100.0% 78.8%
2drvA00 3.30.1960.10 Alpha Beta › 2-Layer Sandwich › SSo0622-like fold › tRNA wybutosine-synthesizing-like 0.55 44.0 3.28e-01 91.2% 83.2%
4qjvA03 3.30.70.3110 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.54 41.0 4.27e-01 100.0% 95.2%
1d5aA03 3.90.1600.10 Alpha Beta › Alpha-Beta Complex › Palm domain of DNA polymerase › B family DNA polymerase, palm domain 0.53 44.0 3.47e-01 98.5% 76.2%
1ctfA00 3.30.1390.10 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein L30; Chain: A, › Ribosomal protein L7/L12, C-terminal domain/Adaptor protein ClpS 0.53 43.0 4.33e-01 100.0% 97.1%
5yuyA01 3.30.70.270 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain 0.53 43.0 3.75e-01 100.0% 88.5%
3dgpB00 3.30.70.1220 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › TFB5-like 0.53 37.0 3.80e-01 85.3% 81.0%
4xviA01 1.10.150.20 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain 0.52 43.0 3.42e-01 94.1% 90.3%
2wtvA02 1.10.510.10 Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 0.51 37.0 2.87e-01 79.4% 41.8%
5t3eB01 3.30.559.10 Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Chloramphenicol acetyltransferase-like domain 0.51 40.0 3.10e-01 92.6% 69.2%
2v9kA03 3.30.70.2510 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.50 41.0 3.48e-01 95.6% 80.8%
ECOD (82)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3957678 205.1.1.20 ↗ a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4_15 0.96 81.0 8.64e-01 98.5% 100.0%
1293083 205.1.1.20 ↗ a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4_15 0.95 84.0 8.59e-01 100.0% 95.5%
3291392 205.1.1.19 ↗ a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4_13 0.95 79.0 7.82e-01 100.0% 84.3%
None — 0.95 79.0 8.39e-01 100.0% 98.3%
4437344 205.1.1.20 ↗ a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4_15 0.94 84.0 8.06e-01 100.0% 84.0%
3281264 205.1.1.20 ↗ a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4_15 0.94 87.0 8.59e-01 97.1% 100.0%
4433457 205.1.1.20 ↗ a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4_15 0.94 83.0 8.53e-01 100.0% 96.9%
None — 0.94 83.0 8.64e-01 100.0% 100.0%
3280292 205.1.1.19 ↗ a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4_13 0.94 83.0 8.50e-01 100.0% 96.9%
5068803 205.1.1.0 ↗ a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin 0.93 78.0 8.28e-01 100.0% 98.3%
143003 205.1.1.19 ↗ a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4_13 0.93 81.0 8.29e-01 100.0% 95.5%
None — 0.93 81.0 8.29e-01 100.0% 95.5%
3299414 650.1.1.0 ↗ alpha bundles › Chaperone J-domain › Chaperone J-domain › Chaperone J-domain 0.92 78.0 5.13e-01 100.0% 26.1%
3335815 205.1.1.19 ↗ a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4_13 0.92 77.0 5.96e-01 100.0% 44.4%
None — 0.91 77.0 7.04e-01 100.0% 70.6%
3334231 205.1.1.19 ↗ a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4_13 0.91 77.0 6.91e-01 100.0% 67.4%
3590571 205.1.1.19 ↗ a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4_13 0.91 86.0 8.58e-01 100.0% 97.1%
3951348 205.1.1.20 ↗ a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4_15 0.91 79.0 7.94e-01 100.0% 91.2%
2770883 205.1.1.19 ↗ a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4_13 0.91 87.0 8.54e-01 100.0% 95.8%
3958827 205.1.1.0 ↗ a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin 0.91 79.0 7.94e-01 100.0% 91.2%
3666157 205.1.1.0 ↗ a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin 0.91 77.0 5.41e-01 100.0% 33.3%
4991807 205.1.1.20 ↗ a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4_15 0.91 86.0 8.28e-01 100.0% 97.3%
4956885 205.1.1.19 ↗ a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4_13 0.90 75.0 7.49e-01 100.0% 85.7%
4557665 205.1.1.19 ↗ a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4_13 0.90 76.0 7.81e-01 100.0% 93.8%
4950797 205.1.1.20 ↗ a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4_15 0.90 84.0 8.15e-01 100.0% 97.3%
3658156 205.1.1.19 ↗ a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4_13 0.90 76.0 5.90e-01 100.0% 45.2%
4834258 205.1.1.20 ↗ a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4_15 0.90 76.0 7.60e-01 100.0% 88.6%
4956029 205.1.1.20 ↗ a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4_15 0.89 84.0 8.10e-01 100.0% 97.3%
5002652 205.1.1.19 ↗ a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4_13 0.89 77.0 7.68e-01 100.0% 88.6%
4974520 205.1.1.19 ↗ a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4_13 0.89 74.0 7.71e-01 100.0% 95.2%
4931868 205.1.1.20 ↗ a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4_15 0.88 83.0 8.25e-01 100.0% 100.0%
3826288 205.1.1.19 ↗ a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4_13 0.88 75.0 7.46e-01 100.0% 87.1%
3348551 205.1.1.19 ↗ a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4_13 0.88 74.0 6.82e-01 100.0% 71.8%
5030192 205.1.1.20 ↗ a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4_15 0.87 81.0 7.83e-01 100.0% 97.3%
4987578 205.1.1.15 ↗ a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4_6 0.87 71.0 7.56e-01 100.0% 98.3%
4944980 205.1.1.20 ↗ a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4_15 0.86 78.0 7.75e-01 97.1% 98.6%
4942240 205.1.1.20 ↗ a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4_15 0.86 80.0 7.33e-01 100.0% 88.2%
4941823 205.1.1.20 ↗ a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4_15 0.86 80.0 7.52e-01 100.0% 93.8%
5074046 205.1.1.0 ↗ a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin 0.85 77.0 7.69e-01 98.5% 100.0%
4987415 205.1.1.16 ↗ a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4_7 0.85 67.0 6.20e-01 100.0% 67.1%
4964007 205.1.1.20 ↗ a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4_15 0.85 77.0 7.09e-01 100.0% 77.6%
5053672 205.1.1.33 ↗ a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4_10 0.84 66.0 6.21e-01 98.5% 70.0%
4950081 205.1.1.33 ↗ a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4_10 0.84 68.0 6.40e-01 100.0% 72.5%
4927578 205.1.1.19 ↗ a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4_13 0.84 74.0 7.18e-01 100.0% 85.3%
3814918 205.1.1.0 ↗ a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin 0.84 73.0 6.00e-01 100.0% 54.8%
5028979 205.1.1.20 ↗ a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4_15 0.84 76.0 7.53e-01 97.1% 97.1%
4942278 205.1.1.20 ↗ a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4_15 0.84 77.0 7.36e-01 100.0% 89.7%
4999294 205.1.1.33 ↗ a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4_10 0.83 65.0 6.46e-01 98.5% 80.0%
5026942 205.1.1.16 ↗ a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4_7 0.83 66.0 6.75e-01 100.0% 87.7%
4941674 205.1.1.19 ↗ a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4_13 0.83 78.0 7.53e-01 100.0% 92.0%
5003799 205.1.1.33 ↗ a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4_10 0.83 65.0 6.72e-01 100.0% 87.7%
5030019 205.1.1.19 ↗ a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4_13 0.83 76.0 7.32e-01 98.5% 96.0%
5074451 205.1.1.16 ↗ a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4_7 0.83 63.0 6.91e-01 95.6% 100.0%
5048965 205.1.1.33 ↗ a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4_10 0.82 68.0 6.45e-01 100.0% 75.0%
4999775 205.1.1.33 ↗ a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4_10 0.82 66.0 6.40e-01 98.5% 77.3%
5007687 205.1.1.131 ↗ a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4_9 0.82 65.0 6.29e-01 100.0% 77.3%
4990687 205.1.1.1 ↗ a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4 0.81 63.0 6.61e-01 100.0% 93.3%
5021370 205.1.1.33 ↗ a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4_10 0.81 64.0 6.20e-01 100.0% 76.0%
4944624 205.1.1.0 ↗ a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin 0.81 64.0 5.96e-01 98.5% 68.7%
5068619 205.1.1.1 ↗ a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4 0.81 65.0 6.95e-01 100.0% 100.0%
4961352 205.1.1.20 ↗ a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4_15 0.81 74.0 6.86e-01 100.0% 94.0%
5048735 205.1.1.22 ↗ a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4_21 0.81 64.0 6.42e-01 100.0% 82.9%
4971655 205.1.1.0 ↗ a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin 0.80 66.0 6.27e-01 100.0% 75.0%
5049151 205.1.1.0 ↗ a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin 0.79 67.0 6.24e-01 100.0% 73.8%
3602748 205.1.1.40 ↗ a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4, Fer4_9 0.79 63.0 5.60e-01 100.0% 61.1%
4980354 205.1.1.0 ↗ a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin 0.78 61.0 5.54e-01 100.0% 63.3%
4463561 205.1.1.41 ↗ a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4, Fer4_10 0.78 62.0 6.36e-01 100.0% 89.2%
5021646 205.1.1.131 ↗ a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4_9 0.78 62.0 6.19e-01 98.5% 82.9%
4999869 205.1.1.1 ↗ a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4 0.77 67.0 6.39e-01 100.0% 81.2%
5472 205.1.1.80 ↗ a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4, Fer4_7, Fer4_9 0.77 61.0 5.89e-01 98.5% 75.3%
4606342 205.1.1.16 ↗ a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4_7 0.76 63.0 6.66e-01 95.6% 100.0%
4609859 205.1.1.35 ↗ a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4+Fer4_7 0.75 66.0 6.77e-01 100.0% 100.0%
4489127 205.1.1.41 ↗ a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4, Fer4_10 0.75 65.0 6.69e-01 100.0% 98.5%
4537022 205.1.1.1 ↗ a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4 0.73 65.0 5.98e-01 100.0% 77.6%
4954290 205.1.1.1 ↗ a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4 0.60 55.0 5.07e-01 100.0% 80.0%
3993032 101.1.2.186 ↗ alpha arrays › HTH › HTH › winged helix domain › ASH2L-like_WH 0.58 42.0 3.57e-01 79.4% 85.8%
3287709 304.7.1.0 ↗ a+b two layers › Alpha-beta plaits › Protease propeptides/inhibitors › Protease propeptides/inhibitors 0.56 44.0 4.53e-01 98.5% 93.8%
3713128 304.120.1.0 ↗ a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in ThiI › Ferredoxin-like domain in ThiI 0.56 47.0 4.71e-01 98.5% 97.1%
5062139 1075.1.2.1 ↗ alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › MacB transmembrane domain › FtsX 0.54 45.0 2.72e-01 98.5% 14.6%
3799886 304.8.1.49 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › R1_ABCA1 0.53 45.0 4.50e-01 98.5% 98.6%
4997717 304.48.1.3 ↗ a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › DNA_pol_B 0.52 43.0 2.87e-01 97.1% 70.3%
3277186 4964.1.1.1 ↗ alpha arrays › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › DNA_pol_A 0.51 38.0 3.20e-01 82.4% 67.2%