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KT624200.1__AMM44997.1__SP15_197__00199
Bact-VirKT624200.1__AMM44997.1__SP15_197__00199
Identity
- Accession:
- KT624200 ↗
- Kingdom:
- phage
Quality
93.0
mean pLDDT
Taxonomy
TaxID: 1792032
Cluster
View cluster (2 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 9-91
Domain cluster:
rep: NC_028805.1__YP_009199191.1__AVV11_gp061__00130__D3-78
CATH (11)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2o8bB04 | 1.10.1420.10 | Mainly Alpha › Orthogonal Bundle › MutS, DNA mismatch repair protein; Chain A, domain 3 › | 0.57 | 38.0 | 3.33e-01 | 88.0% | 43.5% |
| 3wknF00 | 6.20.50.120 | Special › Other non-globular › N-terminal domain of TfIIb › | 0.56 | 29.0 | 3.58e-01 | 78.3% | 84.8% |
| 6e4nA00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.56 | 31.0 | 3.31e-01 | 86.7% | 60.6% |
| 1wg1A01 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.55 | 31.0 | 3.29e-01 | 84.3% | 60.6% |
| 1y1aA01 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.55 | 43.0 | 4.19e-01 | 86.7% | 79.2% |
| 1uu1B01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.54 | 38.0 | 3.31e-01 | 85.5% | 46.6% |
| 3buxB02 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.54 | 41.0 | 4.10e-01 | 88.0% | 78.7% |
| 3thxB04 | 1.10.1420.10 | Mainly Alpha › Orthogonal Bundle › MutS, DNA mismatch repair protein; Chain A, domain 3 › | 0.53 | 37.0 | 3.25e-01 | 91.6% | 47.7% |
| 1rkqA02 | 3.30.1240.10 | Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › | 0.52 | 39.0 | 3.64e-01 | 80.7% | 91.6% |
| 8an5A01 | 3.30.460.40 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › | 0.51 | 43.0 | 3.38e-01 | 97.6% | 62.5% |
| 7dklA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.50 | 36.0 | 3.60e-01 | 78.3% | 88.9% |
ECOD (17)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4950410 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.59 | 48.0 | 4.96e-01 | 96.4% | 96.2% |
| 5032006 | 242.4.1.2 ↗ | a+b two layers › Homing endonucleases-like › DNA polymerase II large subunit DP2 central a+b domain › DNA polymerase II large subunit DP2 central a+b domain › PolC_DP2_central | 0.58 | 51.0 | 4.75e-01 | 100.0% | 89.5% |
| 4941230 | 242.4.1.2 ↗ | a+b two layers › Homing endonucleases-like › DNA polymerase II large subunit DP2 central a+b domain › DNA polymerase II large subunit DP2 central a+b domain › PolC_DP2_central | 0.58 | 51.0 | 4.62e-01 | 100.0% | 89.6% |
| 3592600 | 108.1.1.0 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand | 0.58 | 46.0 | 4.50e-01 | 89.2% | 82.1% |
| 4020672 | 314.1.1.0 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases | 0.57 | 45.0 | 3.09e-01 | 91.6% | 85.9% |
| 3290652 | 306.2.1.0 ↗ | a+b two layers › Glucose permease domain IIB-like › arginine repressor C terminal domain-related › C-terminal domain of arginine repressor | 0.56 | 49.0 | 4.77e-01 | 97.6% | 97.8% |
| 2325417 | 3012.1.1.0 ↗ | a+b two layers › Cof C2 cap domain › Cof C2 cap domain › Cof C2 cap domain | 0.56 | 40.0 | 3.99e-01 | 75.9% | 78.2% |
| 5030462 | 242.4.1.2 ↗ | a+b two layers › Homing endonucleases-like › DNA polymerase II large subunit DP2 central a+b domain › DNA polymerase II large subunit DP2 central a+b domain › PolC_DP2_central | 0.56 | 49.0 | 4.59e-01 | 100.0% | 89.5% |
| 3741370 | 865.1.1.0 ↗ | beta complex topology › PheT/TilS domain › PheT/TilS domain › PheT/TilS domain | 0.56 | 40.0 | 3.71e-01 | 77.1% | 88.2% |
| 5012054 | 310.3.1.0 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › General secretion pathway protein M (EpsM) periplasmic domain-related › General secretion pathway protein M (EpsM) periplasmic domain-related | 0.54 | 32.0 | 3.47e-01 | 88.0% | 70.0% |
| 3593993 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.53 | 36.0 | 2.70e-01 | 71.1% | 90.2% |
| 4962753 | 601.23.1.1 ↗ | alpha bundles › Four-helical up-and-down bundle › DNA repair protein MutS, domain III › DNA repair protein MutS, domain III › MutS_III | 0.53 | 42.0 | 2.95e-01 | 90.4% | 79.0% |
| 3482581 | 108.1.1.0 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand | 0.53 | 43.0 | 4.35e-01 | 100.0% | 93.8% |
| 3964461 | 331.3.1.0 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like | 0.52 | 41.0 | 3.66e-01 | 85.5% | 95.8% |
| 3955389 | 4011.1.1.0 ↗ | beta barrels › beta-barrel domain in acetyl-CoA synthetase-like proteins › beta-barrel domain in acetyl-CoA synthetase-like proteins › beta-barrel domain in acetyl-CoA synthetase-like proteins | 0.52 | 41.0 | 4.27e-01 | 88.0% | 100.0% |
| 4155058 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.52 | 43.0 | 3.88e-01 | 94.0% | 90.0% |
| 3251998 | 242.1.1.1 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_1 | 0.52 | 43.0 | 4.12e-01 | 98.8% | 86.7% |
D2
medium
residues 95-133
Domain cluster:
representative