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KT624200.1__AMM45041.1__SP15_238__00243

Bact-Vir

KT624200.1__AMM45041.1__SP15_238__00243

Identity

Accession:
KT624200 ↗
Kingdom:
phage

Quality

85.1 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-80
PDB
Domain cluster: representative
CATH (59)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5kcoA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.75 50.0 5.69e-01 84.6% 91.5%
2akkA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.74 60.0 6.13e-01 96.2% 91.9%
4fssB00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.72 53.0 5.96e-01 83.3% 100.0%
1x6gA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.70 55.0 5.49e-01 89.7% 81.5%
6ghmC02 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.69 53.0 5.73e-01 85.9% 100.0%
2v1rA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.69 53.0 5.68e-01 82.1% 95.5%
1jegA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.69 50.0 5.61e-01 83.3% 100.0%
6my0A02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.68 48.0 5.16e-01 85.9% 87.7%
4qqgG00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.68 57.0 5.97e-01 96.2% 100.0%
2ct4A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.68 51.0 5.34e-01 84.6% 88.6%
2dl5A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.68 51.0 5.16e-01 87.2% 80.8%
1vwxA02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.67 57.0 5.65e-01 97.4% 88.7%
1x43A01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.67 49.0 5.40e-01 84.6% 98.4%
2kxcA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.67 50.0 5.39e-01 83.3% 92.5%
3askA02 2.30.30.1150 Mainly Beta › Roll › SH3 type barrels. › 0.67 57.0 4.55e-01 96.2% 48.3%
2v1qA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.67 48.0 5.39e-01 82.1% 100.0%
2jxbA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.67 46.0 4.53e-01 82.1% 66.3%
2vgeA00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.66 57.0 4.25e-01 97.4% 51.2%
1zuyA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.66 46.0 5.24e-01 79.5% 100.0%
4epcA02 2.30.30.170 Mainly Beta › Roll › SH3 type barrels. › 0.66 50.0 5.20e-01 82.1% 97.2%
1sp4B00 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.65 57.0 4.24e-01 100.0% 84.4%
2egeA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.64 51.0 5.25e-01 85.9% 90.7%
1i1jB00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.64 51.0 4.66e-01 87.2% 76.0%
1pnjA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.64 50.0 4.84e-01 83.3% 87.2%
1s9cC01 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.64 46.0 3.73e-01 75.6% 93.8%
2ke9A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.63 49.0 5.21e-01 83.3% 97.0%
3pieC09 2.30.30.750 Mainly Beta › Roll › SH3 type barrels. › 0.63 54.0 5.02e-01 94.9% 78.8%
2l3rA02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.63 51.0 5.29e-01 92.3% 95.9%
4gakA00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.62 42.0 2.97e-01 70.5% 35.6%
5byuA00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.62 42.0 3.66e-01 71.8% 78.9%
3agjF01 2.30.30.870 Mainly Beta › Roll › SH3 type barrels. › Pelota, domain A 0.61 53.0 4.57e-01 100.0% 80.3%
7xpkA01 2.30.30.490 Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain 0.60 51.0 4.18e-01 93.6% 75.2%
2hx0A01 3.30.1330.80 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Hypothetical protein, similar to alpha- acetolactate decarboxylase; domain 2 0.60 50.0 4.34e-01 97.4% 71.2%
1m9sA04 2.30.30.170 Mainly Beta › Roll › SH3 type barrels. › 0.60 46.0 4.55e-01 84.6% 88.4%
2gf6A00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.60 41.0 3.52e-01 71.8% 79.7%
4esqA00 3.40.1000.70 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › PknH-like extracellular domain 0.59 47.0 3.52e-01 87.2% 64.9%
4c47A01 2.60.40.1620 Mainly Beta › Sandwich › Immunoglobulin-like › Lipoprotein YajI-like 0.58 48.0 4.14e-01 89.7% 93.4%
3gekA00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.57 43.0 3.74e-01 83.3% 91.6%
3n8hA02 3.30.1300.10 Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › Pantoate-beta-alanine ligase, C-terminal domain 0.57 38.0 3.87e-01 83.3% 69.7%
5bp3B00 3.10.129.110 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Polyketide synthase dehydratase 0.57 44.0 3.08e-01 85.9% 51.1%
2ov9C01 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.57 41.0 3.44e-01 79.5% 78.9%
3kh8A02 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.56 38.0 3.30e-01 71.8% 87.2%
4ge6A00 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.55 45.0 2.98e-01 87.2% 43.6%
3fzzA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.55 44.0 3.82e-01 87.2% 90.8%
4c5wA01 3.30.2020.30 Alpha Beta › 2-Layer Sandwich › NE0471 N-terminal domain-like › 0.54 44.0 4.18e-01 91.0% 87.6%
4qunA00 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.54 43.0 2.91e-01 85.9% 43.1%
3qijB03 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.53 37.0 3.65e-01 75.6% 97.8%
2hboA01 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.53 41.0 3.53e-01 85.9% 92.5%
5a3lA00 2.60.120.1560 Mainly Beta › Sandwich › Jelly Rolls › 0.53 45.0 3.39e-01 98.7% 91.9%
1wchA00 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.53 42.0 2.81e-01 85.9% 39.6%
3zx7A02 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.53 40.0 3.49e-01 85.9% 97.1%
3kg6C00 3.10.129.110 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Polyketide synthase dehydratase 0.52 41.0 2.94e-01 89.7% 72.2%
4ikcA00 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.52 42.0 2.85e-01 85.9% 42.0%
3qcmA00 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.52 42.0 2.82e-01 85.9% 42.7%
3fzxA00 2.40.360.20 Mainly Beta › Beta Barrel › YmcC-like fold › 0.52 39.0 2.96e-01 84.6% 59.9%
2jjdF02 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.52 42.0 2.87e-01 87.2% 46.6%
3q6kA00 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.51 43.0 2.78e-01 93.6% 85.0%
3s9cA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.51 44.0 3.86e-01 97.4% 70.0%
2xxlA03 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.51 36.0 3.12e-01 76.9% 70.8%
ECOD (67)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3923675 4.1.1.54 beta barrels › SH3 › SH3 › SH3 › SH3_2 0.79 61.0 6.68e-01 87.2% 98.5%
3505111 4.1.1.318 beta barrels › SH3 › SH3 › SH3 › PF26085 0.75 55.0 5.18e-01 83.3% 64.5%
3931418 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.74 53.0 5.92e-01 84.6% 98.3%
3573620 4.1.1.318 beta barrels › SH3 › SH3 › SH3 › PF26085 0.74 51.0 5.72e-01 78.2% 93.3%
5029166 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.73 62.0 6.43e-01 91.0% 100.0%
4161673 4.1.1.105 beta barrels › SH3 › SH3 › SH3 › DUF5604 0.73 51.0 5.02e-01 88.5% 67.1%
3898952 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.73 57.0 5.82e-01 89.7% 86.7%
3484007 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.72 56.0 5.90e-01 87.2% 91.4%
3842363 1.1.5.76 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › CABIT 0.71 64.0 5.71e-01 100.0% 80.0%
4405469 4.1.1.248 beta barrels › SH3 › SH3 › SH3 › CABIT 0.71 64.0 5.98e-01 100.0% 92.6%
3770803 4.1.1.248 beta barrels › SH3 › SH3 › SH3 › CABIT 0.71 64.0 5.67e-01 100.0% 80.0%
3622911 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.70 58.0 6.08e-01 92.3% 100.0%
3530247 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.70 52.0 5.67e-01 84.6% 95.4%
4951199 4.1.1.40 beta barrels › SH3 › SH3 › SH3 › FeoA 0.69 60.0 6.18e-01 96.2% 100.0%
5066664 4076.3.1.0 a+b two layers › L9 N-domain-like › GINS/PriA/YqbF domain › GINS/PriA/YqbF domain 0.69 40.0 5.01e-01 79.5% 100.0%
3278698 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.69 57.0 5.16e-01 89.7% 90.5%
3225762 4.1.1.92 beta barrels › SH3 › SH3 › SH3 › SH3_9 0.69 53.0 5.38e-01 83.3% 85.3%
4001172 4.1.1.92 beta barrels › SH3 › SH3 › SH3 › SH3_9 0.69 52.0 5.45e-01 84.6% 88.6%
3554293 4.1.1.92 beta barrels › SH3 › SH3 › SH3 › SH3_9 0.69 53.0 5.71e-01 85.9% 96.9%
25836 4.1.1.92 beta barrels › SH3 › SH3 › SH3 › SH3_9 0.69 53.0 5.56e-01 85.9% 88.9%
3389432 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.69 52.0 5.36e-01 84.6% 84.0%
4055974 4.1.1.248 beta barrels › SH3 › SH3 › SH3 › CABIT 0.68 61.0 5.22e-01 100.0% 74.4%
1031172 4.1.1.113 beta barrels › SH3 › SH3 › SH3 › TraI_2B 0.68 58.0 6.01e-01 98.7% 100.0%
3546309 4.1.1.92 beta barrels › SH3 › SH3 › SH3 › SH3_9 0.68 52.0 5.35e-01 88.5% 85.3%
5055039 4.11.1.2 beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S26 0.68 59.0 4.86e-01 100.0% 54.3%
4680114 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.68 50.0 5.10e-01 84.6% 81.3%
3879172 4.1.1.54 beta barrels › SH3 › SH3 › SH3 › SH3_2 0.67 52.0 5.63e-01 84.6% 98.5%
5001806 4076.4.1.0 a+b two layers › L9 N-domain-like › primase chain A, C-terminal domain › primase chain A, C-terminal domain 0.67 38.0 4.57e-01 78.2% 89.6%
4934987 4076.3.1.0 a+b two layers › L9 N-domain-like › GINS/PriA/YqbF domain › GINS/PriA/YqbF domain 0.67 36.0 4.51e-01 75.6% 91.1%
4083057 4076.3.1.0 a+b two layers › L9 N-domain-like › GINS/PriA/YqbF domain › GINS/PriA/YqbF domain 0.66 39.0 4.67e-01 80.8% 90.0%
4419456 4076.4.1.0 a+b two layers › L9 N-domain-like › primase chain A, C-terminal domain › primase chain A, C-terminal domain 0.66 37.0 4.54e-01 78.2% 87.8%
4939553 4076.4.1.0 a+b two layers › L9 N-domain-like › primase chain A, C-terminal domain › primase chain A, C-terminal domain 0.66 38.0 4.52e-01 79.5% 88.0%
3385654 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.66 55.0 4.77e-01 92.3% 73.3%
4951587 4076.3.1.0 a+b two layers › L9 N-domain-like › GINS/PriA/YqbF domain › GINS/PriA/YqbF domain 0.66 38.0 4.59e-01 80.8% 90.0%
3529708 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.65 48.0 4.89e-01 83.3% 80.0%
3586662 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.65 52.0 4.54e-01 87.2% 89.2%
3710561 4.1.1.92 beta barrels › SH3 › SH3 › SH3 › SH3_9 0.65 51.0 5.53e-01 83.3% 100.0%
3595899 3529.1.1.0 beta sandwiches › Major vault protein (MVP) structural repeat domain › Major vault protein (MVP) structural repeat domain › Major vault protein (MVP) structural repeat domain 0.65 44.0 4.76e-01 91.0% 84.6%
3915732 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.65 51.0 4.96e-01 89.7% 77.6%
2849853 4.1.1.54 beta barrels › SH3 › SH3 › SH3 › SH3_2 0.64 49.0 5.22e-01 84.6% 95.5%
3399557 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.64 52.0 5.43e-01 88.5% 97.1%
4932061 4076.4.1.0 a+b two layers › L9 N-domain-like › primase chain A, C-terminal domain › primase chain A, C-terminal domain 0.63 36.0 4.51e-01 79.5% 97.8%
4608000 222.1.1.9 a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › MaoC_dehydrat_N 0.63 47.0 3.82e-01 78.2% 97.1%
4505316 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.63 46.0 5.04e-01 89.7% 100.0%
4501781 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.63 54.0 5.06e-01 98.7% 100.0%
3687614 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.63 50.0 4.82e-01 87.2% 93.3%
165654 4.8.1.6 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Tudor-knot 0.62 49.0 5.09e-01 89.7% 91.9%
3281618 4.31.1.1 beta barrels › SH3 › Central WYL domain of RspWYL1 › Central WYL domain of RspWYL1 › WYL 0.62 52.0 4.85e-01 93.6% 81.0%
4013810 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.62 51.0 4.86e-01 89.7% 88.9%
5000438 4076.3.1.0 a+b two layers › L9 N-domain-like › GINS/PriA/YqbF domain › GINS/PriA/YqbF domain 0.62 40.0 4.17e-01 84.6% 71.4%
2552660 4.23.1.2 beta barrels › SH3 › Dom34/Pelota N-terminal domain-like › Dom34/Pelota N-terminal domain-like › PF26356 0.61 52.0 4.53e-01 100.0% 80.3%
3424637 4.1.1.313 beta barrels › SH3 › SH3 › SH3 › DUF7912 0.60 52.0 4.91e-01 96.2% 100.0%
3634047 222.1.1.15 a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › 4HBT_3C 0.60 46.0 3.57e-01 85.9% 76.8%
5000523 4.23.1.2 beta barrels › SH3 › Dom34/Pelota N-terminal domain-like › Dom34/Pelota N-terminal domain-like › PF26356 0.59 50.0 4.44e-01 100.0% 83.3%
3882851 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.58 52.0 4.71e-01 100.0% 78.1%
3174580 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.58 51.0 4.97e-01 97.4% 98.8%
4004354 10.12.1.115 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › PF30437 0.57 45.0 3.78e-01 85.9% 81.5%
5051927 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.57 50.0 4.31e-01 96.2% 100.0%
4007792 10.12.1.115 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › PF30437 0.56 45.0 3.76e-01 87.2% 80.7%
4022961 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.56 44.0 3.19e-01 87.2% 57.0%
3266009 3529.1.1.1 beta sandwiches › Major vault protein (MVP) structural repeat domain › Major vault protein (MVP) structural repeat domain › Major vault protein (MVP) structural repeat domain › Vault 0.56 37.0 4.10e-01 91.0% 96.4%
3796176 220.1.1.11 beta barrels › PH domain-like › PH domain-like › PH domain-like › Rpn13_ADRM1_Pru 0.54 43.0 3.50e-01 87.2% 64.0%
4007473 10.12.1.115 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › PF30437 0.53 42.0 3.56e-01 85.9% 84.4%
3559236 319.1.1.0 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones 0.53 32.0 3.71e-01 80.8% 87.3%
5079413 5.1.3.272 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › SBBP 0.52 42.0 2.91e-01 87.2% 35.5%
3287105 5084.1.1.33 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › DUF6004 0.52 39.0 3.11e-01 84.6% 91.4%
3924608 4059.1.1.0 a+b complex topology › Serpins › Serpins › Serpins 0.50 37.0 2.57e-01 80.8% 61.6%