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KT624200.1__AMM45049.1__SP15_244__00251
Bact-VirKT624200.1__AMM45049.1__SP15_244__00251
Identity
- Accession:
- KT624200 ↗
- Kingdom:
- phage
Quality
81.5
mean pLDDT
Taxonomy
TaxID: 1792032
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 52-95
Domain cluster:
representative
CATH (41)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2ra9A01 | 3.10.540.10 | Alpha Beta › Roll › duf1285 like fold › duf1285 like domain | 0.68 | 52.0 | 4.95e-01 | 86.4% | 77.8% |
| 4xtvB02 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.66 | 52.0 | 5.14e-01 | 100.0% | 89.6% |
| 3n6xA02 | 3.40.50.11290 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.65 | 56.0 | 4.32e-01 | 97.7% | 56.6% |
| 1wh2A01 | 3.30.1490.40 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › GYF domain | 0.65 | 49.0 | 4.46e-01 | 100.0% | 60.7% |
| 2qqrA02 | 3.10.330.70 | Alpha Beta › Roll › Vcp-like ATPase; Chain A, domain 2 › | 0.65 | 54.0 | 5.19e-01 | 100.0% | 100.0% |
| 2x4jA01 | 2.30.30.600 | Mainly Beta › Roll › SH3 type barrels. › | 0.65 | 54.0 | 4.26e-01 | 100.0% | 43.1% |
| 3nzkA01 | 3.30.230.20 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › lpxc deacetylase, domain 1 | 0.62 | 46.0 | 3.45e-01 | 86.4% | 60.9% |
| 4r3dA03 | 2.60.120.1680 | Mainly Beta › Sandwich › Jelly Rolls › | 0.62 | 45.0 | 3.29e-01 | 100.0% | 26.3% |
| 6my0A02 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.61 | 48.0 | 4.42e-01 | 100.0% | 70.8% |
| 3oymA01 | 1.10.340.70 | Mainly Alpha › Orthogonal Bundle › Endonuclease III; domain 1 › | 0.61 | 42.0 | 3.44e-01 | 90.9% | 35.5% |
| 1b3qA04 | 2.40.50.180 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › CheA-289, Domain 4 | 0.60 | 43.0 | 3.93e-01 | 79.5% | 68.3% |
| 2yzsA01 | 3.100.10.20 | Alpha Beta › Ribosomal Protein L15; Chain: K; domain 2 › Ribosomal Protein L15; Chain: K; domain 2 › CRISPR-associated endonuclease Cas1, N-terminal domain | 0.60 | 47.0 | 3.98e-01 | 93.2% | 75.0% |
| 2eqmA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.59 | 47.0 | 4.54e-01 | 100.0% | 94.3% |
| 2dmoA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.59 | 48.0 | 4.32e-01 | 100.0% | 77.9% |
| 2fhdA02 | 2.30.30.810 | Mainly Beta › Roll › SH3 type barrels. › | 0.59 | 47.0 | 4.19e-01 | 100.0% | 86.1% |
| 2f5kA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.59 | 46.0 | 4.55e-01 | 100.0% | 98.0% |
| 1ex4B02 | 2.30.30.10 | Mainly Beta › Roll › SH3 type barrels. › Integrase, C-terminal domain superfamily, retroviral | 0.59 | 46.0 | 4.37e-01 | 100.0% | 76.3% |
| 3h8zA02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.58 | 46.0 | 4.27e-01 | 100.0% | 70.3% |
| 4kh9B02 | 2.60.40.1930 | Mainly Beta › Sandwich › Immunoglobulin-like › Macroglobulin (MG2) domain | 0.57 | 43.0 | 3.25e-01 | 84.1% | 85.8% |
| 5zx8A00 | 3.40.50.1470 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Peptidyl-tRNA hydrolase | 0.57 | 40.0 | 2.77e-01 | 79.5% | 26.9% |
| 4omfB02 | 3.10.450.750 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.57 | 44.0 | 4.39e-01 | 93.2% | 97.9% |
| 2dnlA01 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.57 | 42.0 | 3.45e-01 | 84.1% | 100.0% |
| 2htdB00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.56 | 47.0 | 3.48e-01 | 100.0% | 42.7% |
| 1nztA01 | 3.30.230.20 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › lpxc deacetylase, domain 1 | 0.56 | 40.0 | 3.17e-01 | 86.4% | 60.5% |
| 5cvmA00 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.56 | 49.0 | 2.95e-01 | 100.0% | 22.7% |
| 3kz5E00 | 6.10.140.1550 | Special › Helix non-globular › Helix Hairpins › | 0.56 | 35.0 | 3.51e-01 | 88.6% | 58.3% |
| 3oc4A02 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.55 | 44.0 | 3.42e-01 | 100.0% | 99.2% |
| 3bfmA02 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.55 | 39.0 | 3.98e-01 | 93.2% | 81.4% |
| 4npsA02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.55 | 41.0 | 3.88e-01 | 88.6% | 72.4% |
| 1br2A04 | 1.20.58.530 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.54 | 39.0 | 2.77e-01 | 81.8% | 68.3% |
| 5f1sA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 40.0 | 3.14e-01 | 81.8% | 91.2% |
| 3tg9A00 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.54 | 40.0 | 2.44e-01 | 81.8% | 91.3% |
| 3in6A02 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.54 | 45.0 | 3.40e-01 | 100.0% | 46.2% |
| 4ftdA01 | 2.60.40.2340 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.53 | 41.0 | 3.28e-01 | 88.6% | 91.6% |
| 2m3xC02 | 2.40.10.360 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.53 | 40.0 | 3.57e-01 | 88.6% | 68.1% |
| 3gdoA02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.52 | 40.0 | 2.71e-01 | 93.2% | 67.3% |
| 3zgzD04 | 2.20.28.290 | Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › | 0.52 | 42.0 | 3.91e-01 | 100.0% | 74.2% |
| 8ajjA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.52 | 39.0 | 3.22e-01 | 97.7% | 76.3% |
| 2cs7A00 | 3.10.50.90 | Alpha Beta › Roll › Chitinase A; domain 3 › | 0.52 | 40.0 | 3.88e-01 | 97.7% | 78.2% |
| 3na2A00 | 3.40.1570.20 | Alpha Beta › 3-Layer(aba) Sandwich › Heme iron utilization protein-like fold › | 0.52 | 40.0 | 3.10e-01 | 100.0% | 72.5% |
| 4fqpA03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 38.0 | 3.09e-01 | 84.1% | 87.0% |
ECOD (50)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3624163 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.71 | 61.0 | 4.89e-01 | 100.0% | 58.9% |
| 3936130 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.70 | 59.0 | 4.71e-01 | 100.0% | 55.8% |
| 3936917 | 375.14.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-like domain in leucyl-tRNA synthetase (LS1) › Rubredoxin-like domain in leucyl-tRNA synthetase (LS1) | 0.68 | 48.0 | 5.04e-01 | 93.2% | 100.0% |
| 3511375 | 4.1.1.349 ↗ | beta barrels › SH3 › SH3 › SH3 › ROF | 0.66 | 55.0 | 4.57e-01 | 100.0% | 57.6% |
| 4100435 | 230.1.1.3 ↗ | a+b two layers › T-fold › Tetrahydrobiopterin biosynthesis enzymes-like › Tetrahydrobiopterin biosynthesis enzymes-like › PTPS | 0.66 | 48.0 | 3.43e-01 | 81.8% | 60.7% |
| 3598125 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.66 | 55.0 | 4.72e-01 | 100.0% | 68.0% |
| 4985969 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.65 | 53.0 | 4.94e-01 | 100.0% | 75.0% |
| 3953959 | 4.1.1.424 ↗ | beta barrels › SH3 › SH3 › SH3 › PF29823 | 0.65 | 51.0 | 4.98e-01 | 93.2% | 100.0% |
| 3799990 | 5.1.4.258 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RCC1, RCC1_2 | 0.65 | 53.0 | 3.12e-01 | 93.2% | 96.9% |
| 3805880 | 212.1.1.15 ↗ | a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › LpxC | 0.65 | 48.0 | 2.99e-01 | 86.4% | 83.7% |
| 4658510 | 375.14.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-like domain in leucyl-tRNA synthetase (LS1) › Rubredoxin-like domain in leucyl-tRNA synthetase (LS1) | 0.65 | 47.0 | 4.83e-01 | 95.5% | 92.5% |
| 5000172 | 2003.1.10.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › PreATP-grasp domain | 0.64 | 51.0 | 4.19e-01 | 97.7% | 65.3% |
| 3339169 | 4.1.1.415 ↗ | beta barrels › SH3 › SH3 › SH3 › PNPOx_N | 0.64 | 51.0 | 4.35e-01 | 100.0% | 61.2% |
| 3219050 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.63 | 52.0 | 4.39e-01 | 100.0% | 55.0% |
| 4375889 | 212.1.1.15 ↗ | a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › LpxC | 0.62 | 46.0 | 2.91e-01 | 86.4% | 82.4% |
| 4071868 | 1.1.7.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RimM | 0.62 | 53.0 | 4.26e-01 | 100.0% | 54.4% |
| 3795121 | 4.1.1.110 ↗ | beta barrels › SH3 › SH3 › SH3 › Tudor_FRX1 | 0.61 | 48.0 | 4.47e-01 | 100.0% | 69.2% |
| 3562168 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.61 | 49.0 | 4.10e-01 | 100.0% | 48.9% |
| 5041484 | 2.10.1.1 ↗ | beta barrels › OB-fold › CheW › CheW › CheW | 0.61 | 48.0 | 3.62e-01 | 100.0% | 66.7% |
| 4032923 | 2003.1.2.24 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 | 0.60 | 48.0 | 2.97e-01 | 100.0% | 34.2% |
| 5051640 | 2.10.1.1 ↗ | beta barrels › OB-fold › CheW › CheW › CheW | 0.60 | 46.0 | 3.44e-01 | 100.0% | 62.8% |
| 3252177 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.60 | 49.0 | 3.82e-01 | 100.0% | 82.7% |
| 5044858 | 221.1.3.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Sulfite oxidase, middle catalytic domain | 0.60 | 48.0 | 3.69e-01 | 100.0% | 46.2% |
| 3998325 | 304.28.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain | 0.59 | 45.0 | 2.90e-01 | 100.0% | 16.6% |
| 5007113 | 2.10.1.1 ↗ | beta barrels › OB-fold › CheW › CheW › CheW | 0.59 | 46.0 | 3.40e-01 | 90.9% | 44.6% |
| 4949981 | 2.10.1.1 ↗ | beta barrels › OB-fold › CheW › CheW › CheW | 0.58 | 46.0 | 3.52e-01 | 100.0% | 65.6% |
| 3601825 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.58 | 49.0 | 3.70e-01 | 100.0% | 90.4% |
| 4118226 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.57 | 44.0 | 4.05e-01 | 100.0% | 65.7% |
| 540 | 4.1.1.8 ↗ | beta barrels › SH3 › SH3 › SH3 › IN_DBD_C | 0.57 | 45.0 | 4.46e-01 | 100.0% | 93.8% |
| 3589056 | 2003.1.2.56 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › NAD_binding_9 | 0.57 | 44.0 | 2.56e-01 | 93.2% | 34.2% |
| 3203053 | 11.1.5.94 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › Gpi16 | 0.57 | 51.0 | 3.36e-01 | 100.0% | 30.0% |
| 3627765 | 391.1.2.0 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › VWC domain-related | 0.56 | 40.0 | 3.57e-01 | 100.0% | 52.3% |
| 4982454 | 284.1.1.0 ↗ | a+b two layers › FKBP-like › FKBP-like › FKBP-like | 0.56 | 48.0 | 4.40e-01 | 100.0% | 86.7% |
| 3228951 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.56 | 47.0 | 3.77e-01 | 100.0% | 47.8% |
| 4028153 | 4081.1.1.0 ↗ | beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related | 0.56 | 48.0 | 3.14e-01 | 100.0% | 22.6% |
| 3906518 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.56 | 48.0 | 3.42e-01 | 100.0% | 34.8% |
| 5020421 | 2.10.1.1 ↗ | beta barrels › OB-fold › CheW › CheW › CheW | 0.56 | 41.0 | 3.27e-01 | 100.0% | 67.7% |
| 3414285 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.55 | 47.0 | 3.63e-01 | 100.0% | 43.0% |
| 1413813 | 4.8.1.5 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › LytTR | 0.55 | 45.0 | 4.31e-01 | 100.0% | 90.9% |
| 3584429 | 391.1.2.1 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › VWC domain-related › VWC | 0.55 | 39.0 | 2.87e-01 | 77.3% | 83.7% |
| 3938399 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.54 | 44.0 | 3.50e-01 | 100.0% | 43.0% |
| 3521805 | 376.1.1.20 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_UBOX | 0.54 | 45.0 | 3.84e-01 | 97.7% | 62.7% |
| 3236612 | 391.1.2.1 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › VWC domain-related › VWC | 0.54 | 38.0 | 2.68e-01 | 79.5% | 46.7% |
| 3628539 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.54 | 44.0 | 3.41e-01 | 100.0% | 41.0% |
| 5048597 | 4333.1.1.2 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain › TaqI_C | 0.53 | 45.0 | 2.71e-01 | 100.0% | 49.3% |
| 3996532 | 391.1.2.0 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › VWC domain-related | 0.53 | 38.0 | 3.90e-01 | 100.0% | 85.0% |
| 3387649 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.52 | 43.0 | 3.15e-01 | 100.0% | 35.6% |
| 3239076 | 389.1.2.0 ↗ | few secondary structure elements › EGF-like › EGF-related › Complement control module/SCR domain | 0.52 | 39.0 | 3.84e-01 | 100.0% | 90.9% |
| 3461757 | 389.1.1.0 ↗ | few secondary structure elements › EGF-like › EGF-related › EGF/Laminin | 0.51 | 45.0 | 3.48e-01 | 100.0% | 90.7% |
| 5046101 | 2004.1.1.5 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran | 0.51 | 42.0 | 2.58e-01 | 100.0% | 14.0% |