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KT624200.1__AMM45051.1__SP15_246__00253
Bact-VirKT624200.1__AMM45051.1__SP15_246__00253
Identity
- Accession:
- KT624200 ↗
- Kingdom:
- phage
Quality
46.3
mean pLDDT
Taxonomy
TaxID: 1792032
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 104-148
Domain cluster:
representative
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3m6uA01 | 3.30.70.1170 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Sun protein; domain 3 | 0.55 | 33.0 | 2.72e-01 | 86.7% | 31.4% |
| 2e9yB00 | 3.40.1160.10 | Alpha Beta › 3-Layer(aba) Sandwich › Carbamate kinase › Acetylglutamate kinase-like | 0.52 | 39.0 | 2.53e-01 | 100.0% | 56.7% |
| 3vlaA02 | 2.40.70.10 | Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases | 0.51 | 39.0 | 2.73e-01 | 95.6% | 51.6% |
| 2dy1A01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.51 | 38.0 | 2.51e-01 | 95.6% | 18.2% |
| 2eo6A01 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.50 | 38.0 | 3.08e-01 | 93.3% | 55.6% |
| 8agaA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.50 | 35.0 | 2.54e-01 | 73.3% | 51.6% |
ECOD (18)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4026760 | 375.1.1.85 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Auto_anti-p27 | 0.68 | 46.0 | 4.67e-01 | 71.1% | 73.3% |
| 3169310 | 2004.1.1.428 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SNF2-rel_dom, Helicase_C, HDA2-3 | 0.64 | 45.0 | 2.53e-01 | 75.6% | 8.4% |
| 3263170 | 622.4.1.0 ↗ | alpha bundles › YvfG-like › Mite allergen Der p 5-related › Mite allergen Der p 5-related | 0.62 | 42.0 | 2.77e-01 | 71.1% | 17.2% |
| 3841512 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.59 | 41.0 | 3.52e-01 | 75.6% | 48.8% |
| 4096474 | 4203.1.1.1 ↗ | few secondary structure elements › HSP33 redox switch-like › HSP33 redox switch-like › HSP33 redox switch-like › HSP33 | 0.58 | 40.0 | 3.86e-01 | 73.3% | 64.0% |
| 3910066 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.57 | 40.0 | 3.46e-01 | 75.6% | 48.8% |
| 3407747 | 327.11.2.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_1 | 0.57 | 43.0 | 3.47e-01 | 84.4% | 63.3% |
| 5039659 | 2006.1.4.10 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › PIN_4 | 0.54 | 45.0 | 2.84e-01 | 100.0% | 28.0% |
| 1663454 | 304.137.1.3 ↗ | a+b two layers › Alpha-beta plaits › NOL1/NOP2/sun N-terminal ferredoxin-like domain › NOL1/NOP2/sun N-terminal ferredoxin-like domain › RsmF-B_ferredox | 0.54 | 33.0 | 2.55e-01 | 88.9% | 26.7% |
| 4928227 | 239.2.1.1 ↗ | beta barrels › Ribosomal protein L25-like › HisI-like › HisI-like › PRA-CH | 0.53 | 36.0 | 3.18e-01 | 71.1% | 71.2% |
| 4645555 | 4203.1.1.1 ↗ | few secondary structure elements › HSP33 redox switch-like › HSP33 redox switch-like › HSP33 redox switch-like › HSP33 | 0.53 | 37.0 | 3.64e-01 | 75.6% | 70.0% |
| 4260807 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.53 | 40.0 | 3.74e-01 | 100.0% | 87.1% |
| 5047531 | 243.6.1.9 ↗ | a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain › TGT_C2 | 0.52 | 36.0 | 3.20e-01 | 75.6% | 48.0% |
| 5049962 | 1144.1.1.1 ↗ | beta sandwiches › Apc (acetophenone carboxylase) beta subunit C-terminal domain › Apc (acetophenone carboxylase) beta subunit C-terminal domain › Apc (acetophenone carboxylase) beta subunit C-terminal domain › Hydantoinase_B | 0.51 | 39.0 | 2.43e-01 | 93.3% | 32.6% |
| 4180555 | 4203.1.1.1 ↗ | few secondary structure elements › HSP33 redox switch-like › HSP33 redox switch-like › HSP33 redox switch-like › HSP33 | 0.51 | 35.0 | 3.31e-01 | 73.3% | 61.8% |
| 5015826 | 7523.1.1.0 ↗ | a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II | 0.51 | 36.0 | 2.45e-01 | 84.4% | 24.5% |
| 5014186 | 243.6.1.14 ↗ | a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain › TGT_C1 | 0.50 | 39.0 | 2.95e-01 | 100.0% | 51.7% |
| 4929212 | 304.7.1.0 ↗ | a+b two layers › Alpha-beta plaits › Protease propeptides/inhibitors › Protease propeptides/inhibitors | 0.50 | 41.0 | 3.24e-01 | 100.0% | 68.2% |