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KT624200.1__AMM45098.1__SP15_290__00300
Bact-VirKT624200.1__AMM45098.1__SP15_290__00300
Identity
- Accession:
- KT624200 ↗
- Kingdom:
- phage
Quality
85.9
mean pLDDT
Taxonomy
TaxID: 1792032
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-108
Domain cluster:
representative
CATH (20)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3umbA02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.70 | 47.0 | 5.31e-01 | 73.6% | 92.4% |
| 2ymmA02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.69 | 44.0 | 5.16e-01 | 75.5% | 93.2% |
| 3umcD02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.69 | 45.0 | 5.08e-01 | 76.4% | 89.7% |
| 4jgiA01 | 1.10.1240.10 | Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › Methionine synthase domain | 0.63 | 35.0 | 3.96e-01 | 80.2% | 71.2% |
| 1z21A00 | 1.10.10.1000 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Type III secretion system virulence factor YopR, core domain | 0.62 | 39.0 | 4.06e-01 | 82.1% | 68.8% |
| 2lyiA01 | 1.10.274.60 | Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › Spidroin, repetitive domain | 0.60 | 42.0 | 3.80e-01 | 75.5% | 52.7% |
| 4b4yA00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.58 | 43.0 | 3.90e-01 | 79.2% | 96.0% |
| 2xheA04 | 1.25.40.60 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.57 | 36.0 | 3.53e-01 | 88.7% | 57.6% |
| 4zvaA00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.55 | 42.0 | 3.78e-01 | 81.1% | 89.3% |
| 1gcvA00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.55 | 41.0 | 3.80e-01 | 79.2% | 94.3% |
| 3nf2A00 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.55 | 40.0 | 2.89e-01 | 77.4% | 44.4% |
| 4i8qA01 | 3.40.605.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 | 0.54 | 41.0 | 3.01e-01 | 81.1% | 88.7% |
| 5ts9B00 | 1.20.59.10 | Mainly Alpha › Up-down Bundle › Chorismate Mutase Domain, subunit A › Chorismate mutase | 0.54 | 39.0 | 3.44e-01 | 84.9% | 50.3% |
| 4iu9B02 | 1.20.1250.20 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › MFS general substrate transporter like domains | 0.53 | 44.0 | 3.69e-01 | 94.3% | 95.1% |
| 5ojcA00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.52 | 39.0 | 3.48e-01 | 79.2% | 90.3% |
| 5wp3B00 | 1.10.132.20 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor | 0.52 | 45.0 | 4.57e-01 | 94.3% | 100.0% |
| 3axjB02 | 1.20.58.200 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Translin; domain 2 | 0.51 | 35.0 | 3.90e-01 | 82.1% | 89.4% |
| 1ks9A02 | 1.10.1040.10 | Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 | 0.51 | 37.0 | 3.58e-01 | 82.1% | 67.5% |
| 4xxiA00 | 1.10.490.20 | Mainly Alpha › Orthogonal Bundle › Globin-like › Phycocyanins | 0.51 | 35.0 | 3.24e-01 | 83.0% | 53.1% |
| 5af7B03 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.50 | 35.0 | 3.17e-01 | 71.7% | 94.6% |
ECOD (34)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4597634 | 632.19.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Choline binding protein A › Choline binding protein A | 0.65 | 31.0 | 3.59e-01 | 70.8% | 60.0% |
| 3772061 | 109.4.1.809 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Codanin-1_C | 0.65 | 57.0 | 3.99e-01 | 99.1% | 39.2% |
| 3491114 | 101.1.10.6 ↗ | alpha arrays › HTH › HTH › Cyclin-like › RB_A | 0.65 | 46.0 | 3.51e-01 | 71.7% | 49.4% |
| 4232906 | 1075.3.1.1 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC importer transmembrane domain fold › Type I ABC importer transmembrane domain fold › BPD_transp_1 | 0.64 | 51.0 | 4.00e-01 | 85.8% | 97.8% |
| 3236724 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.63 | 51.0 | 5.13e-01 | 89.6% | 86.7% |
| 3228465 | 604.4.1.0 ↗ | alpha bundles › Spectrin repeat-like › Alpha-hemoglobin stabilizing protein AHSP › Alpha-hemoglobin stabilizing protein AHSP | 0.62 | 51.0 | 5.15e-01 | 89.6% | 100.0% |
| 3277746 | 2006.1.1.44 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase, Hydrolase_like | 0.61 | 52.0 | 4.01e-01 | 93.4% | 68.4% |
| 5051799 | 3076.1.1.1 ↗ | alpha arrays › Putative triphosphoribosyl-dephospho-coA synthase › Putative triphosphoribosyl-dephospho-coA synthase › Putative triphosphoribosyl-dephospho-coA synthase › CitG | 0.60 | 45.0 | 3.33e-01 | 81.1% | 28.2% |
| 3966335 | 2006.1.1.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like | 0.60 | 49.0 | 3.87e-01 | 90.6% | 68.3% |
| 4019411 | 101.21.1.0 ↗ | alpha arrays › HTH › HTH domain in DNA topoisomerase IV alpha subunit › HTH domain in DNA topoisomerase IV alpha subunit | 0.59 | 39.0 | 4.48e-01 | 81.1% | 96.0% |
| 3794203 | 101.11.1.0 ↗ | alpha arrays › HTH › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 | 0.59 | 42.0 | 4.53e-01 | 83.0% | 92.9% |
| 4821317 | 2006.1.1.44 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase, Hydrolase_like | 0.58 | 47.0 | 3.90e-01 | 87.7% | 67.0% |
| 3591004 | 3355.1.1.8 ↗ | alpha complex topology › dicarboxylate/sodium symporter › dicarboxylate/sodium symporter › dicarboxylate/sodium symporter › Na_H_antiporter | 0.58 | 39.0 | 2.58e-01 | 84.0% | 16.0% |
| 3805461 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.57 | 30.0 | 3.01e-01 | 78.3% | 46.4% |
| 4571267 | 1079.1.1.13 ↗ | alpha complex topology › Transmembrane reductase CcdA › Transmembrane reductase CcdA › Transmembrane reductase CcdA › Mntp | 0.56 | 47.0 | 4.01e-01 | 92.5% | 86.5% |
| 3288545 | 191.1.1.1 ↗ | alpha bundles › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › TetR_C_1 | 0.56 | 45.0 | 4.01e-01 | 92.5% | 60.7% |
| 3486599 | 5001.1.1.8 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › HlyIII | 0.56 | 50.0 | 3.58e-01 | 99.1% | 60.6% |
| 3288707 | 191.1.1.1 ↗ | alpha bundles › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › TetR_C_1 | 0.56 | 45.0 | 3.92e-01 | 90.6% | 56.9% |
| 3938097 | 621.1.1.0 ↗ | alpha bundles › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain | 0.56 | 48.0 | 4.69e-01 | 100.0% | 87.0% |
| 4456623 | 101.1.2.309 ↗ | alpha arrays › HTH › HTH › winged helix domain › GPAT_C | 0.55 | 39.0 | 3.24e-01 | 78.3% | 40.5% |
| 2171615 | 191.1.1.1 ↗ | alpha bundles › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › TetR_C_1 | 0.55 | 44.0 | 4.00e-01 | 92.5% | 63.0% |
| 4950875 | 5079.1.1.1 ↗ | alpha duplicates or obligate multimers › Magnesium transporter MgtE membrane domain › Magnesium transporter MgtE membrane domain › Magnesium transporter MgtE membrane domain › MgtE | 0.55 | 45.0 | 3.91e-01 | 93.4% | 66.9% |
| 3397682 | 5050.1.1.0 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter | 0.54 | 42.0 | 3.39e-01 | 84.9% | 84.0% |
| 3278587 | 191.1.1.1 ↗ | alpha bundles › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › TetR_C_1 | 0.54 | 42.0 | 3.76e-01 | 89.6% | 57.4% |
| 4633155 | 5050.1.1.0 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter | 0.53 | 42.0 | 3.44e-01 | 87.7% | 87.9% |
| 5062416 | 5050.1.1.9 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 | 0.53 | 43.0 | 3.51e-01 | 88.7% | 76.1% |
| 3389329 | 5076.1.1.1 ↗ | alpha complex topology › Mitochondrial ADP/ATP carrier-like › Mitochondrial ADP/ATP carrier › Mitochondrial ADP/ATP carrier › Mito_carr | 0.53 | 41.0 | 2.98e-01 | 85.8% | 51.2% |
| 4931792 | 306.3.1.6 ↗ | a+b two layers › Glucose permease domain IIB-like › eIF1-like › eIF1-like › DEAD_assoc | 0.52 | 39.0 | 3.25e-01 | 79.2% | 76.9% |
| 3586132 | 101.11.1.1 ↗ | alpha arrays › HTH › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › PNPase | 0.52 | 37.0 | 3.92e-01 | 83.0% | 85.3% |
| 4378410 | 3755.3.1.320 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › V_ATPase_I | 0.52 | 37.0 | 3.24e-01 | 73.6% | 90.3% |
| 3823649 | 150.1.2.2 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Heme oxygenase/Ribonucleotide reductase › Heme_oxygenase | 0.52 | 37.0 | 3.09e-01 | 88.7% | 40.7% |
| 3958112 | 1075.1.2.0 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › MacB transmembrane domain | 0.51 | 44.0 | 3.44e-01 | 96.2% | 54.7% |
| 3202009 | 5050.1.1.21 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › FTR1 | 0.51 | 37.0 | 3.28e-01 | 78.3% | 95.2% |
| 5070376 | 5050.1.1.0 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter | 0.50 | 38.0 | 3.16e-01 | 81.1% | 89.3% |