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KT626446.1__ALF02549.1__XO26_0049__00049
Bact-VirKT626446.1__ALF02549.1__XO26_0049__00049
Identity
- Accession:
- KT626446 ↗
- Kingdom:
- phage
Quality
92.0
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 4-42
Domain cluster:
representative
CATH (11)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2l3nA00 | 1.10.1050.20 | Mainly Alpha › Orthogonal Bundle › Ribosomal Protein S4 Delta 41; Chain A, domain 1 › | 0.65 | 48.0 | 3.67e-01 | 84.6% | 32.7% |
| 2lbcA02 | 1.10.8.10 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain | 0.64 | 47.0 | 4.50e-01 | 92.3% | 67.9% |
| 3crvA03 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.62 | 47.0 | 3.04e-01 | 89.7% | 52.8% |
| 1mwrA03 | 3.30.1390.30 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein L30; Chain: A, › Penicillin-binding protein 2a; domain 3 | 0.62 | 48.0 | 4.18e-01 | 94.9% | 58.6% |
| 4z9mB02 | 3.30.590.10 | Alpha Beta › 2-Layer Sandwich › Creatine Kinase; Chain A, domain 2 › Glutamine synthetase/guanido kinase, catalytic domain | 0.59 | 43.0 | 2.77e-01 | 82.1% | 96.0% |
| 1ebdC00 | 4.10.320.10 | Few Secondary Structures › Irregular › Dihydrolipoamide Transferase › E3-binding domain | 0.59 | 45.0 | 4.48e-01 | 89.7% | 82.9% |
| 1zgdA00 | 3.20.20.100 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › NADP-dependent oxidoreductase domain | 0.58 | 42.0 | 2.58e-01 | 87.2% | 30.5% |
| 3kh8B01 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.53 | 40.0 | 2.78e-01 | 87.2% | 21.4% |
| 3ijdA00 | 3.20.20.220 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › | 0.52 | 37.0 | 2.33e-01 | 84.6% | 28.0% |
| 5cbgA00 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.51 | 38.0 | 3.04e-01 | 94.9% | 52.9% |
| 2oafB00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.51 | 36.0 | 2.61e-01 | 84.6% | 70.8% |
ECOD (8)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4502290 | 206.1.1.118 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › UBA_SIK3 | 0.68 | 55.0 | 4.97e-01 | 100.0% | 73.3% |
| 3318869 | 103.1.1.27 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › UBA_7 | 0.68 | 53.0 | 4.96e-01 | 100.0% | 69.1% |
| 3398259 | 103.1.1.1 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › UBA | 0.68 | 52.0 | 5.13e-01 | 100.0% | 82.2% |
| 5060855 | 2004.1.1.144 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD_2 | 0.66 | 47.0 | 2.94e-01 | 84.6% | 41.2% |
| 3561589 | 103.1.1.51 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › UBA_SIK3 | 0.64 | 51.0 | 4.55e-01 | 100.0% | 63.1% |
| 3175514 | 103.1.1.27 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › UBA_7 | 0.62 | 48.0 | 4.53e-01 | 100.0% | 69.1% |
| 3711673 | 4299.1.1.1 ↗ | alpha arrays › BSD domain › BSD domain › BSD domain › BSD | 0.60 | 47.0 | 3.44e-01 | 97.4% | 71.5% |
| 5013347 | 101.1.2.946 ↗ | alpha arrays › HTH › HTH › winged helix domain › PF26555 | 0.60 | 44.0 | 4.28e-01 | 82.1% | 73.3% |
D2
medium
residues 101-169
Domain cluster:
rep: X01458.1__CAA25690.1__X__00001__D18-79
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2lbcA02 | 1.10.8.10 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain | 0.59 | 42.0 | 4.59e-01 | 78.3% | 98.1% |
| 2l3nA00 | 1.10.1050.20 | Mainly Alpha › Orthogonal Bundle › Ribosomal Protein S4 Delta 41; Chain A, domain 1 › | 0.59 | 39.0 | 3.53e-01 | 73.9% | 46.2% |
ECOD (3)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4034522 | 857.1.1.2 ↗ | a+b duplicates or obligate multimers › Cell division protein ZapA-like › Cell division protein ZapA-like › Cell division protein ZapA-like › PVL_ORF50 | 0.69 | 49.0 | 4.41e-01 | 75.4% | 53.7% |
| 4147304 | 103.5.1.2 ↗ | alpha arrays › RuvA-C › post-HMGL domain-like › post-HMGL domain-like › DmpG_comm | 0.65 | 44.0 | 4.68e-01 | 71.0% | 95.0% |
| 3781465 | 103.1.1.88 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › PF27606 | 0.59 | 43.0 | 4.50e-01 | 88.4% | 91.7% |