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KT630649.1__ALF02495.1__SEN34_20__00020

Bact-Vir

KT630649.1__ALF02495.1__SEN34_20__00020

Identity

Accession:
KT630649 ↗
Kingdom:
phage

Quality

92.2 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-71
PDB
Domain cluster: representative
CATH (56)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1l3aA00 2.30.31.10 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A 0.82 60.0 4.41e-01 76.8% 37.3%
3qf7A01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.76 66.0 4.27e-01 94.2% 39.5%
2owpA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.75 59.0 4.73e-01 84.1% 84.5%
1lkfA00 2.70.240.10 Mainly Beta › Distorted Sandwich › Leukocidin-like › Leukocidin/porin MspA 0.73 63.0 4.09e-01 94.2% 76.0%
3blcA00 2.70.98.90 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.73 66.0 4.31e-01 100.0% 79.3%
3bxoA02 2.20.130.10 Mainly Beta › Single Sheet › S-adenosyl-L-methionine-dependent methyltransferases › CAC2371-like domains 0.72 51.0 5.49e-01 73.9% 93.2%
4hgzA02 2.20.25.570 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › 0.71 48.0 5.16e-01 81.2% 81.7%
6xrbA01 3.40.1000.10 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich 0.71 54.0 4.27e-01 81.2% 46.0%
3en8A01 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.71 53.0 4.49e-01 79.7% 84.8%
6jhpA01 2.70.98.60 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › alpha-galactosidase from lactobacil brevis 0.70 62.0 4.08e-01 100.0% 88.2%
3d2lA02 2.20.25.110 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › S-adenosyl-L-methionine-dependent methyltransferases 0.70 50.0 5.23e-01 75.4% 85.7%
3mi6A01 2.70.98.60 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › alpha-galactosidase from lactobacil brevis 0.70 61.0 4.01e-01 100.0% 88.3%
1yq2A05 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.69 63.0 4.09e-01 100.0% 86.3%
3actA01 2.70.98.40 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Glycoside hydrolase, family 65, N-terminal domain 0.69 63.0 4.13e-01 100.0% 80.5%
4z48A00 2.50.20.10 Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX 0.69 63.0 4.26e-01 100.0% 31.2%
4n6tA00 3.10.450.10 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.68 52.0 4.95e-01 79.7% 92.4%
1uuzB00 3.40.1420.10 Alpha Beta › 3-Layer(aba) Sandwich › Inhibitor of vertebrate lysozyme, Ivy › Inhibitor of vertebrate lysozyme 0.68 61.0 4.96e-01 100.0% 79.7%
3ebwA01 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.68 53.0 4.18e-01 84.1% 47.9%
3obaA05 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.68 60.0 3.97e-01 100.0% 80.9%
3ci0K01 3.30.1300.30 Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › GSPII I/J protein-like 0.68 55.0 4.81e-01 91.3% 58.7%
1gpqB00 3.40.1420.10 Alpha Beta › 3-Layer(aba) Sandwich › Inhibitor of vertebrate lysozyme, Ivy › Inhibitor of vertebrate lysozyme 0.68 60.0 4.93e-01 100.0% 71.9%
4k15A00 2.60.40.3860 Mainly Beta › Sandwich › Immunoglobulin-like › 0.68 47.0 3.79e-01 73.9% 58.7%
1dwnA00 3.30.380.10 Alpha Beta › 2-Layer Sandwich › MS2 Viral Coat Protein › MS2 Viral Coat Protein 0.68 61.0 4.97e-01 100.0% 66.1%
3fkaB00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.67 50.0 4.18e-01 79.7% 85.0%
6secA03 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.66 59.0 3.91e-01 100.0% 87.3%
4ebrA00 3.30.1460.50 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.66 59.0 4.54e-01 100.0% 65.0%
1lf6A01 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.66 59.0 3.93e-01 100.0% 70.3%
1vprA03 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.66 59.0 4.48e-01 98.6% 65.6%
2gr7A00 3.30.1300.30 Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › GSPII I/J protein-like 0.65 53.0 4.69e-01 98.6% 60.4%
3k1lA01 3.30.457.40 Alpha Beta › 2-Layer Sandwich › Copper Amine Oxidase; Chain A, domain 1 › 0.64 52.0 4.76e-01 100.0% 66.3%
4g79A00 2.170.210.20 Mainly Beta › Beta Complex › Dna Repair Protein Xrcc4; Chain: A, domain 1 › Spindle assembly abnormal protein 6, N-terminal domain 0.64 54.0 4.41e-01 94.2% 100.0%
6ka3A01 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.64 58.0 4.51e-01 100.0% 55.8%
3hdjA01 3.30.1780.10 Alpha Beta › 2-Layer Sandwich › ornithine cyclodeaminase, domain 1 › ornithine cyclodeaminase, domain 1 0.64 55.0 4.42e-01 97.1% 52.9%
8jx6A02 2.30.30.780 Mainly Beta › Roll › SH3 type barrels. › 0.64 45.0 3.94e-01 73.9% 96.1%
6v04A01 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.61 55.0 4.47e-01 100.0% 56.7%
4ec6A00 3.10.450.540 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.60 47.0 4.08e-01 85.5% 88.1%
2ciuA00 3.10.450.320 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Mitochondrial import inner membrane translocase subunit Tim21 0.60 51.0 4.31e-01 98.6% 88.6%
1lj5A02 2.30.39.10 Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 0.60 52.0 4.06e-01 98.6% 79.2%
3q63F00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.60 53.0 4.26e-01 100.0% 54.7%
3tfzB00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.59 48.0 3.75e-01 100.0% 39.4%
2kf2A00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.59 52.0 3.94e-01 100.0% 65.9%
2v8qA01 3.30.310.80 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Kinase associated domain 1, KA1 0.58 50.0 4.61e-01 95.7% 73.0%
2m89A00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.57 51.0 4.10e-01 100.0% 57.5%
2gfgA00 2.40.320.10 Mainly Beta › Beta Barrel › Hypothetical Protein Pfu-838710-001 › Hypothetical Protein Pfu-838710-001 0.57 48.0 3.57e-01 97.1% 83.8%
2w1zA02 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.56 45.0 3.75e-01 95.7% 99.3%
8a7dC01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.56 46.0 3.34e-01 94.2% 42.6%
1lkeA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.55 47.0 3.69e-01 100.0% 47.8%
5w8mA00 3.60.21.10 Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › Metallo-dependent phosphatases 0.54 43.0 3.23e-01 91.3% 92.3%
4bg7A00 2.30.31.10 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A 0.54 43.0 3.91e-01 89.9% 66.3%
1b7eA01 3.90.350.10 Alpha Beta › Alpha-Beta Complex › Transposase Inhibitor Protein From Tn5; Chain A, domain 1 › Transposase Inhibitor Protein From Tn5; Chain A, domain 1 0.54 46.0 3.19e-01 95.7% 39.0%
1ul7A00 3.30.310.80 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Kinase associated domain 1, KA1 0.54 46.0 4.09e-01 100.0% 65.7%
4jf6A00 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.53 45.0 3.18e-01 98.6% 81.6%
1aqbA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.53 46.0 3.48e-01 100.0% 40.0%
3q5zA02 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.52 44.0 3.76e-01 100.0% 100.0%
1ylxA00 3.30.70.1480 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › GK1464-like 0.52 45.0 4.07e-01 100.0% 69.7%
2bujB01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.51 43.0 3.99e-01 100.0% 78.7%
ECOD (48)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5038627 12.3.1.0 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich 0.80 60.0 3.81e-01 89.9% 16.9%
4827588 2003.1.5.81 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_25 0.75 51.0 3.85e-01 81.2% 29.3%
3258590 4210.1.1.0 a+b two layers › WGR domain › WGR domain › WGR domain 0.75 55.0 4.90e-01 76.8% 55.8%
5054861 2004.1.1.198 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23 0.75 65.0 3.89e-01 94.2% 24.3%
1290125 2004.1.1.198 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23 0.74 64.0 4.58e-01 94.2% 61.1%
4955671 7089.1.1.0 a+b two layers › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD 0.73 57.0 5.42e-01 82.6% 77.5%
3791220 4210.1.1.1 a+b two layers › WGR domain › WGR domain › WGR domain › WGR 0.73 58.0 4.77e-01 85.5% 63.7%
3484248 4210.1.1.0 a+b two layers › WGR domain › WGR domain › WGR domain 0.73 58.0 4.77e-01 85.5% 65.0%
3272624 4210.1.1.1 a+b two layers › WGR domain › WGR domain › WGR domain › WGR 0.73 58.0 4.66e-01 85.5% 63.1%
1789717 719.1.1.0 beta barrels › XRCC4, N-terminal domain-like › XRCC4, N-terminal domain › XRCC4, N-terminal domain 0.73 52.0 5.21e-01 75.4% 100.0%
3981884 12.3.1.27 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › DUF5107 0.72 64.0 3.99e-01 100.0% 71.1%
3282535 12.3.1.13 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Glyco_hydro_38C 0.72 65.0 4.34e-01 100.0% 82.3%
5009522 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.71 62.0 3.88e-01 95.7% 18.3%
1385068 12.3.1.25 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Glyco_hydro_36N 0.70 62.0 4.03e-01 100.0% 85.0%
3924939 4210.1.1.1 a+b two layers › WGR domain › WGR domain › WGR domain › WGR 0.70 56.0 4.68e-01 85.5% 67.0%
3567279 243.3.1.4 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › Latexin_N 0.70 53.0 4.48e-01 81.2% 68.7%
3797033 319.1.1.0 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones 0.70 63.0 4.82e-01 100.0% 49.7%
4295817 274.1.1.0 a+b two layers › Pili subunits › Pili subunits › Pili subunits 0.70 60.0 4.81e-01 92.8% 49.2%
3832583 331.3.1.43 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › PDF2_C 0.70 62.0 4.27e-01 100.0% 39.1%
None 0.69 62.0 4.06e-01 100.0% 90.5%
3706858 216.1.1.0 a+b two layers › UBC-like › UBC-like › UBC-like 0.69 62.0 4.95e-01 100.0% 59.3%
4152335 9.2.1.1 beta barrels › Lipocalins/Streptavidin › Avidin/Streptavidin › Avidin/Streptavidin › Avidin 0.67 58.0 4.88e-01 100.0% 68.5%
5079230 216.1.1.0 a+b two layers › UBC-like › UBC-like › UBC-like 0.67 55.0 4.82e-01 100.0% 60.0%
4426077 241.1.1.2 a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone › Autophagy_act_C 0.67 60.0 4.59e-01 100.0% 67.7%
3800450 2003.1.5.13 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Spermine_synth 0.66 57.0 3.59e-01 95.7% 68.4%
2655902 5084.5.1.2 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Omp85 0.66 58.0 3.67e-01 100.0% 21.5%
3974189 274.1.1.0 a+b two layers › Pili subunits › Pili subunits › Pili subunits 0.66 54.0 4.40e-01 88.4% 52.8%
3654176 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.65 50.0 3.17e-01 84.1% 16.9%
3448016 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.65 56.0 3.44e-01 97.1% 29.5%
4666593 241.1.1.2 a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone › Autophagy_act_C 0.65 57.0 4.39e-01 100.0% 67.3%
3378755 216.1.1.0 a+b two layers › UBC-like › UBC-like › UBC-like 0.64 52.0 4.26e-01 88.4% 53.6%
3725129 241.1.1.2 a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone › Autophagy_act_C 0.64 58.0 4.43e-01 100.0% 80.0%
4670128 5087.3.1.1 beta meanders › Lipovitellin-phosvitin complex › Lipovitellin LV-1C › Lipovitellin LV-1C › Vit_open_b-sht 0.64 52.0 3.63e-01 89.9% 30.5%
5034682 12.3.1.74 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › GDE_N 0.63 56.0 3.92e-01 100.0% 85.5%
3278559 881.1.1.0 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.63 53.0 4.05e-01 95.7% 42.4%
3951048 331.4.1.17 a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 › ResB 0.62 55.0 4.58e-01 98.6% 58.3%
4983588 295.1.1.0 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain 0.62 51.0 5.02e-01 94.2% 84.0%
3959672 331.3.1.0 a+b two layers › TBP-like › Bet v1-like › Bet v1-like 0.61 53.0 4.07e-01 100.0% 51.5%
3261183 71.1.1.0 beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB 0.60 49.0 3.58e-01 87.0% 40.0%
144571 331.3.1.11 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc2 0.60 49.0 3.81e-01 100.0% 39.3%
3512529 216.1.1.2 a+b two layers › UBC-like › UBC-like › UBC-like › Autophagy_act_C 0.59 51.0 4.01e-01 100.0% 63.7%
3288058 331.3.1.9 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › AHSA1 0.59 51.0 4.11e-01 100.0% 55.2%
3476907 206.1.1.1 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.58 49.0 3.25e-01 97.1% 53.1%
3840029 883.1.1.0 a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like 0.58 50.0 4.32e-01 100.0% 70.4%
4928245 331.3.1.9 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › AHSA1 0.57 48.0 3.98e-01 100.0% 56.5%
4263663 4099.1.1.0 a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like 0.57 50.0 3.86e-01 100.0% 68.1%
3167073 4099.1.1.0 a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like 0.56 48.0 3.76e-01 100.0% 76.2%
3648057 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.55 47.0 3.00e-01 95.7% 75.2%