Back to structures

KT716399.1__ALH46284.1__POR1_79__00079

Bact-Vir

KT716399.1__ALH46284.1__POR1_79__00079

Identity

Accession:
KT716399 ↗
Kingdom:
phage

Quality

79.0 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 15-100
PDB
Domain cluster: representative
CATH (31)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2zxqA06 1.20.1270.70 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Designed single chain three-helix bundle 0.83 39.0 4.48e-01 79.1% 60.6%
7zxkC01 1.20.1250.10 Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › 0.78 61.0 4.97e-01 82.6% 74.0%
2psmA00 1.20.1250.70 Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › Interleukin-15/Interleukin-21 0.78 58.0 5.16e-01 77.9% 70.9%
2ib0A01 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.76 58.0 4.94e-01 80.2% 72.6%
1dn1B00 1.20.58.70 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.74 65.0 4.72e-01 96.5% 36.9%
5jc3A02 1.20.1320.30 Mainly Alpha › Up-down Bundle › phosphoenolpyruvate carboxylase, domain 3 › 0.70 61.0 5.28e-01 93.0% 97.6%
1s35A02 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.70 50.0 4.63e-01 75.6% 94.5%
1ydxA02 1.10.287.1120 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Bipartite methylase S protein 0.68 54.0 5.29e-01 95.3% 77.8%
2jqqA00 1.20.58.1240 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.68 47.0 3.88e-01 98.8% 40.3%
4h33A00 1.10.287.70 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.68 57.0 5.64e-01 90.7% 91.2%
1f6fA00 1.20.1250.10 Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › 0.67 61.0 4.68e-01 97.7% 85.2%
1ldjA04 1.20.1310.10 Mainly Alpha › Up-down Bundle › 5 helical Cullin repeat like › Cullin Repeats 0.66 49.0 4.42e-01 80.2% 58.3%
4w4kA00 1.10.287.850 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HP0062-like domain 0.65 44.0 4.49e-01 91.9% 73.2%
1kf6A03 1.20.58.100 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain 0.64 50.0 4.46e-01 83.7% 75.8%
4h0pB02 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.63 50.0 3.64e-01 84.9% 48.2%
4gx0A01 1.10.287.70 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.63 53.0 4.98e-01 91.9% 88.3%
2kj8A00 1.10.150.130 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain 0.61 45.0 4.08e-01 77.9% 67.8%
3bujA00 1.10.630.10 Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 0.61 54.0 3.49e-01 98.8% 64.2%
2w9mA02 1.10.150.20 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain 0.61 43.0 4.72e-01 75.6% 91.2%
3kv0A01 1.10.3520.10 Mainly Alpha › Orthogonal Bundle › Glycolipid transfer protein, GLTP › Glycolipid transfer protein 0.60 54.0 4.31e-01 100.0% 62.9%
1w36B04 1.10.486.10 Mainly Alpha › Orthogonal Bundle › PCRA; domain 4 › PCRA; domain 4 0.60 43.0 3.63e-01 74.4% 78.8%
3anwA01 1.20.58.1030 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.59 53.0 4.80e-01 96.5% 77.9%
3rcyB01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.59 44.0 3.73e-01 79.1% 74.5%
2kvsA00 1.10.150.260 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › YozE SAM-like 0.56 43.0 4.48e-01 83.7% 92.5%
1xo0A01 1.10.150.130 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain 0.55 39.0 3.62e-01 74.4% 70.3%
6vq6H01 1.10.287.3240 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.54 44.0 3.41e-01 91.9% 53.4%
2yqzA02 1.10.8.900 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.54 34.0 3.79e-01 73.3% 82.4%
2zxkA00 3.40.1500.20 Alpha Beta › 3-Layer(aba) Sandwich › oxygen-dependent coproporphyrinogen oxidase › 0.53 43.0 3.09e-01 100.0% 29.3%
2klqA00 1.20.58.870 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.52 37.0 3.45e-01 75.6% 64.9%
7wj9A01 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.52 38.0 2.65e-01 84.9% 21.5%
2gkgA00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.52 31.0 2.80e-01 77.9% 41.8%
ECOD (44)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3414050 601.1.1.0 alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin 0.82 50.0 4.67e-01 96.5% 50.5%
4259729 3755.3.1.295 alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › WWC1 0.77 50.0 4.21e-01 76.7% 42.2%
4303085 3755.3.1.467 alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › DRC7_C 0.76 52.0 4.62e-01 70.9% 50.8%
3926402 639.2.1.0 alpha arrays › HHA-like › Regulator of acid resistance influenced by indole (AriR) › Regulator of acid resistance influenced by indole (AriR) 0.76 56.0 5.80e-01 76.7% 100.0%
5012651 150.1.1.3 alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin › Rubrerythrin 0.72 51.0 5.16e-01 73.3% 88.2%
3912101 604.6.1.1 alpha bundles › Spectrin repeat-like › GAT-like domain › GAT-like domain › GAT 0.72 53.0 5.00e-01 76.7% 95.0%
3603512 633.5.1.1 alpha bundles › Bromodomain-like › LemA-like › LemA-like › LemA 0.71 64.0 5.38e-01 100.0% 91.0%
3596922 192.2.1.0 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.68 59.0 4.69e-01 91.9% 49.4%
4443691 650.1.1.0 alpha bundles › Chaperone J-domain › Chaperone J-domain › Chaperone J-domain 0.68 55.0 5.70e-01 93.0% 93.8%
4417099 606.1.1.0 alpha complex topology › Nop N-terminal domain › Nop N-terminal domain › Nop N-terminal domain 0.67 60.0 5.70e-01 100.0% 87.0%
3995294 1065.1.1.0 alpha bundles › SPX domain › SPX domain › SPX domain 0.66 50.0 4.44e-01 80.2% 80.0%
3684979 192.3.1.0 alpha bundles › Long alpha-hairpin › Fe,Mn superoxide dismutase (SOD), N-terminal domain › Fe,Mn superoxide dismutase (SOD), N-terminal domain 0.66 47.0 4.58e-01 84.9% 67.4%
3232705 632.7.1.0 alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain 0.66 45.0 4.12e-01 100.0% 53.0%
3276065 109.4.1.506 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Nop14 0.65 53.0 3.45e-01 86.0% 22.3%
3692194 6155.1.1.0 alpha duplicates or obligate multimers › TOG superfamily › SWEET transporter › SWEET transporter 0.62 44.0 4.61e-01 73.3% 86.3%
3261777 4177.1.1.8 alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › BAR_3 0.61 51.0 3.72e-01 93.0% 34.2%
4157135 3755.3.1.0 alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.61 50.0 3.88e-01 100.0% 41.7%
3288898 5059.1.1.1 alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter › EamA 0.61 56.0 3.82e-01 100.0% 52.3%
5063374 5059.1.1.1 alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter › EamA 0.60 54.0 4.65e-01 98.8% 72.6%
3969537 186.1.1.0 alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N 0.59 42.0 4.02e-01 74.4% 86.0%
4086387 6155.1.1.8 alpha duplicates or obligate multimers › TOG superfamily › SWEET transporter › SWEET transporter › Pyr4-TMTC 0.59 45.0 4.10e-01 79.1% 63.6%
4487415 186.1.1.1 alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 0.59 43.0 3.95e-01 77.9% 71.3%
4566384 4163.1.2.1 alpha bundles › GINS helical bundle-like › GINS helical bundle-like › PSF2 C-terminal domain-like › Sld5 0.59 41.0 3.91e-01 73.3% 67.6%
4008705 186.1.1.1 alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 0.59 43.0 3.95e-01 77.9% 73.9%
4964782 186.1.1.0 alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N 0.59 43.0 3.77e-01 77.9% 68.5%
4520087 186.1.1.1 alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 0.58 43.0 4.12e-01 77.9% 85.0%
4377812 186.1.1.1 alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 0.57 42.0 4.04e-01 77.9% 82.0%
4040148 186.1.1.1 alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 0.57 42.0 4.01e-01 77.9% 82.0%
4969225 186.1.1.4 alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_4 0.57 41.0 3.88e-01 77.9% 77.3%
4184803 4163.1.2.1 alpha bundles › GINS helical bundle-like › GINS helical bundle-like › PSF2 C-terminal domain-like › Sld5 0.57 45.0 4.23e-01 96.5% 69.5%
4173849 186.1.1.1 alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 0.56 41.0 3.83e-01 77.9% 74.5%
3560235 2004.1.1.184 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_11 0.56 43.0 2.69e-01 83.7% 15.8%
3995298 109.4.1.506 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Nop14 0.56 52.0 3.35e-01 98.8% 31.6%
3227689 5059.1.1.0 alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter 0.55 49.0 3.32e-01 97.7% 34.8%
3615940 4163.1.2.1 alpha bundles › GINS helical bundle-like › GINS helical bundle-like › PSF2 C-terminal domain-like › Sld5 0.55 45.0 4.03e-01 89.5% 65.8%
3742161 4163.1.2.1 alpha bundles › GINS helical bundle-like › GINS helical bundle-like › PSF2 C-terminal domain-like › Sld5 0.55 45.0 4.16e-01 94.2% 70.0%
4981576 186.1.1.4 alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_4 0.54 38.0 3.81e-01 74.4% 84.4%
3264752 4044.1.1.0 alpha bundles › Helical bundle domain in prismane-like proteins › Helical bundle domain in prismane-like proteins › Helical bundle domain in prismane-like proteins 0.54 45.0 3.77e-01 90.7% 65.5%
3696602 244.1.1.6 a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C › Amino_oxidase 0.54 39.0 2.54e-01 75.6% 66.2%
3060784 4163.1.2.1 alpha bundles › GINS helical bundle-like › GINS helical bundle-like › PSF2 C-terminal domain-like › Sld5 0.53 45.0 4.06e-01 91.9% 68.6%
3784409 4163.1.2.1 alpha bundles › GINS helical bundle-like › GINS helical bundle-like › PSF2 C-terminal domain-like › Sld5 0.53 43.0 3.84e-01 95.3% 62.5%
4961846 2.21.1.0 beta barrels › OB-fold › Small protein B (SmpB) › Small protein B (SmpB) 0.53 41.0 3.26e-01 87.2% 41.1%
3430353 4163.1.2.1 alpha bundles › GINS helical bundle-like › GINS helical bundle-like › PSF2 C-terminal domain-like › Sld5 0.52 43.0 3.79e-01 89.5% 62.4%
3264751 4044.1.1.0 alpha bundles › Helical bundle domain in prismane-like proteins › Helical bundle domain in prismane-like proteins › Helical bundle domain in prismane-like proteins 0.51 38.0 3.28e-01 81.4% 64.8%