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KT724718.1__ALJ98238.1__BiPBO1_24__00024

Bact-Vir

KT724718.1__ALJ98238.1__BiPBO1_24__00024

Identity

Accession:
KT724718 ↗
Kingdom:
phage

Quality

93.0 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Brucella_phage_BiPBO1

TaxID: 1718278

Cluster

View cluster (4 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 5-79
PDB
Domain cluster: rep: MG018927.1__ATW58050.1__CNR34_00117__00115__D8-83
CATH (38)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3ci0K01 3.30.1300.30 Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › GSPII I/J protein-like 0.73 40.0 3.52e-01 70.7% 38.5%
1gsoA03 3.30.470.20 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain 0.69 51.0 4.13e-01 77.3% 76.3%
4jn7A01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.69 49.0 4.22e-01 93.3% 47.1%
1wnhA02 3.10.450.10 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.68 40.0 3.37e-01 70.7% 35.8%
2gupA01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.68 48.0 4.44e-01 98.7% 57.7%
1xc3A01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.68 48.0 4.34e-01 100.0% 54.4%
2z04B03 3.30.470.20 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain 0.67 49.0 3.59e-01 77.3% 46.8%
3wnzA03 3.30.470.20 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain 0.66 49.0 3.85e-01 77.3% 72.2%
3votB02 3.30.470.20 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain 0.66 48.0 3.16e-01 77.3% 32.4%
1l1oF01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.66 46.0 3.85e-01 73.3% 74.8%
3orqA02 3.30.470.20 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain 0.61 45.0 3.23e-01 77.3% 42.7%
1wvqA00 3.40.1520.10 Alpha Beta › 3-Layer(aba) Sandwich › hypothetical protein tt1634 › Ta1353-like 0.61 43.0 3.37e-01 73.3% 84.7%
1rvkA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.61 51.0 4.45e-01 93.3% 60.3%
6cngA03 3.30.1180.10 Alpha Beta › 2-Layer Sandwich › Hypothetical Protein Tm841; Chain: A;domain 3 › 0.61 55.0 4.57e-01 100.0% 93.0%
3lh4A00 3.10.450.10 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.60 42.0 3.59e-01 70.7% 50.4%
3jr7A03 3.30.1180.10 Alpha Beta › 2-Layer Sandwich › Hypothetical Protein Tm841; Chain: A;domain 3 › 0.60 54.0 4.58e-01 100.0% 96.7%
5h80B03 3.30.470.20 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain 0.59 49.0 3.52e-01 96.0% 76.5%
3fdjA03 3.30.1180.10 Alpha Beta › 2-Layer Sandwich › Hypothetical Protein Tm841; Chain: A;domain 3 › 0.59 52.0 4.39e-01 100.0% 93.0%
1u5kA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.58 40.0 3.94e-01 72.0% 92.7%
3qwmA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.58 42.0 3.60e-01 94.7% 46.5%
2a9sB00 3.90.950.20 Alpha Beta › Alpha-Beta Complex › Maf protein › CinA-like 0.58 46.0 3.61e-01 92.0% 40.0%
2l55A00 2.40.50.320 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Copper binding periplasmic protein CusF 0.58 40.0 3.96e-01 73.3% 96.3%
2gdqA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.56 45.0 4.07e-01 93.3% 62.6%
3fdwA00 2.60.40.150 Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain 0.56 43.0 3.51e-01 80.0% 72.3%
4e4tA03 3.30.470.20 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain 0.56 46.0 3.42e-01 92.0% 85.1%
2qxlB05 2.60.34.10 Mainly Beta › Sandwich › Substrate Binding Domain Of DNAk; Chain A, domain 1 › Substrate Binding Domain Of DNAk; Chain A, domain 1 0.55 40.0 3.36e-01 76.0% 63.0%
2f96A00 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.55 49.0 3.59e-01 100.0% 53.7%
1rh8A00 2.60.40.150 Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain 0.55 42.0 3.34e-01 80.0% 69.7%
1x6oA02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.54 38.0 3.74e-01 73.3% 100.0%
3k5iA03 3.30.470.20 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain 0.53 44.0 3.35e-01 94.7% 85.4%
4iu2B01 2.60.40.3810 Mainly Beta › Sandwich › Immunoglobulin-like › 0.53 36.0 3.09e-01 70.7% 53.0%
7r97A02 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.53 35.0 3.70e-01 89.3% 76.5%
3d3lA02 3.10.450.60 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.53 38.0 3.72e-01 74.7% 70.0%
3gd6A01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.52 41.0 3.41e-01 93.3% 45.8%
3aqqA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.52 36.0 3.30e-01 70.7% 72.7%
2czoA00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.52 42.0 3.61e-01 93.3% 76.9%
3f4lA02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.51 39.0 2.82e-01 84.0% 96.4%
4pj2A00 2.40.128.460 Mainly Beta › Beta Barrel › Lipocalin › Periplasmic lysozyme inhibitor of I-type lysozyme 0.50 40.0 3.50e-01 90.7% 74.4%
ECOD (32)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3947082 243.3.1.0 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.76 53.0 4.95e-01 90.7% 60.0%
3827622 12.2.1.7 ↗ beta sandwiches › Glycosyl hydrolase domain-like › Hyaluronate lyase-like, C-terminal domain › Hyaluronate lyase-like, C-terminal domain › BRX 0.75 36.0 3.97e-01 70.7% 55.0%
3671924 4325.1.1.12 ↗ mixed a+b and a/b › YegP-like › YegP-like › YegP-like › AP2 0.72 39.0 4.84e-01 77.3% 100.0%
4948313 206.1.3.8 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › ATP-grasp_3 0.68 49.0 2.99e-01 74.7% 23.2%
4937607 206.1.3.8 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › ATP-grasp_3 0.66 47.0 3.35e-01 73.3% 48.8%
4978566 206.1.3.8 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › ATP-grasp_3 0.65 47.0 3.08e-01 74.7% 34.0%
3588813 206.1.3.0 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp 0.65 48.0 3.21e-01 77.3% 33.7%
3511091 220.1.1.145 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_RASGAP 0.65 46.0 5.03e-01 92.0% 93.3%
3387349 206.1.3.10 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › CPSase_L_D2 0.61 44.0 3.11e-01 74.7% 42.3%
5842 218.1.1.1 ↗ a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › MR_MLE_N 0.61 51.0 4.33e-01 93.3% 55.6%
3736626 4210.1.1.1 ↗ a+b two layers › WGR domain › WGR domain › WGR domain › WGR 0.60 53.0 4.37e-01 96.0% 57.7%
3997451 206.1.3.9 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › Synapsin_C 0.60 44.0 3.52e-01 77.3% 58.6%
4863416 243.3.1.1 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › Cystatin 0.59 41.0 3.69e-01 70.7% 56.3%
5075826 206.1.3.3 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › PPDK_N 0.59 41.0 3.01e-01 73.3% 69.5%
5034706 295.1.1.0 ↗ a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain 0.58 43.0 4.39e-01 88.0% 78.7%
4461189 301.13.1.1 ↗ a+b three layers › Bacillus chorismate mutase-like › DAK1/DegV C-terminal domain › DAK1/DegV C-terminal domain › DegV 0.58 50.0 4.29e-01 97.3% 94.4%
3588328 301.13.1.1 ↗ a+b three layers › Bacillus chorismate mutase-like › DAK1/DegV C-terminal domain › DAK1/DegV C-terminal domain › DegV 0.58 52.0 4.33e-01 100.0% 93.8%
3575714 5.1.4.329 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PF30693 0.58 49.0 3.02e-01 90.7% 20.9%
4999001 206.1.3.19 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › Dala_Dala_lig_C 0.57 45.0 3.11e-01 88.0% 63.9%
3920356 2484.1.1.66 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_3 0.56 48.0 3.78e-01 100.0% 46.9%
3281114 218.1.1.1 ↗ a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › MR_MLE_N 0.56 46.0 3.84e-01 93.3% 51.4%
4961400 218.1.1.0 ↗ a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like 0.56 44.0 4.10e-01 94.7% 68.4%
4329368 301.13.1.1 ↗ a+b three layers › Bacillus chorismate mutase-like › DAK1/DegV C-terminal domain › DAK1/DegV C-terminal domain › DegV 0.55 48.0 4.08e-01 97.3% 94.4%
4928236 2484.1.1.29 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Ppx-GppA 0.55 45.0 2.95e-01 90.7% 85.2%
4861973 4099.1.1.2 ↗ a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › Spindle_Spc25 0.55 39.0 3.57e-01 93.3% 54.9%
4956002 2484.4.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Nitrogenase accessory factor-like › Nitrogenase accessory factor-like 0.55 46.0 4.04e-01 100.0% 62.7%
3858468 4099.1.1.2 ↗ a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › Spindle_Spc25 0.55 37.0 2.69e-01 93.3% 23.6%
3879186 4099.1.1.2 ↗ a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › Spindle_Spc25 0.54 36.0 2.81e-01 93.3% 29.7%
3935343 220.1.1.66 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › SOS1_NGEF_PH 0.52 44.0 3.45e-01 94.7% 49.7%
5065350 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.52 42.0 3.67e-01 94.7% 56.7%
4928000 206.1.3.10 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › CPSase_L_D2 0.50 41.0 2.61e-01 92.0% 44.4%
4802815 5.1.3.35 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Neuraminidase 0.50 43.0 3.08e-01 94.7% 62.6%