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KT724718.1__ALJ98239.1__BiPBO1_25__00025
Bact-VirKT724718.1__ALJ98239.1__BiPBO1_25__00025
Identity
- Accession:
- KT724718 ↗
- Kingdom:
- phage
Quality
80.0
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 28-78
Domain cluster:
representative
CATH (15)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6xgpB01 | 3.30.1930.10 | Alpha Beta › 2-Layer Sandwich › capsid protein of prophage fold › capsid protein of prophage domain | 0.63 | 51.0 | 3.85e-01 | 94.1% | 84.3% |
| 2p14A00 | 3.40.91.50 | Alpha Beta › 3-Layer(aba) Sandwich › Restriction Endonuclease › | 0.63 | 47.0 | 3.30e-01 | 86.3% | 46.2% |
| 1s7iA00 | 3.30.70.1060 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Dimeric alpha+beta barrel | 0.62 | 48.0 | 3.67e-01 | 86.3% | 54.0% |
| 2oikA00 | 3.30.428.10 | Alpha Beta › 2-Layer Sandwich › HIT family, subunit A › HIT-like | 0.60 | 46.0 | 3.46e-01 | 88.2% | 34.5% |
| 2j5aA00 | 3.30.70.60 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S6/Translation elongation factor EF1B | 0.59 | 47.0 | 3.72e-01 | 88.2% | 75.5% |
| 6wubf01 | 3.30.70.60 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S6/Translation elongation factor EF1B | 0.59 | 44.0 | 3.77e-01 | 88.2% | 55.3% |
| 1vmbA00 | 3.30.70.60 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S6/Translation elongation factor EF1B | 0.59 | 48.0 | 3.71e-01 | 88.2% | 74.8% |
| 3fgvA00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.57 | 43.0 | 3.59e-01 | 88.2% | 45.2% |
| 5lq4A01 | 3.40.109.10 | Alpha Beta › 3-Layer(aba) Sandwich › NADH Oxidase › NADH Oxidase | 0.57 | 47.0 | 3.17e-01 | 100.0% | 66.2% |
| 3bdeB00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.57 | 43.0 | 3.63e-01 | 88.2% | 47.5% |
| 2qdfA03 | 3.10.20.310 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac | 0.54 | 41.0 | 3.72e-01 | 88.2% | 97.4% |
| 1golA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.54 | 39.0 | 3.02e-01 | 80.4% | 79.7% |
| 2vsqA06 | 3.30.300.30 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › ANL, C-terminal domain | 0.52 | 38.0 | 3.18e-01 | 84.3% | 45.7% |
| 3ckjA00 | 3.90.550.10 | Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 0.52 | 38.0 | 2.48e-01 | 86.3% | 25.3% |
| 4o2zA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.51 | 41.0 | 2.96e-01 | 88.2% | 53.6% |
ECOD (14)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3704060 | 304.9.1.54 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › zf-CCCH | 0.68 | 56.0 | 4.00e-01 | 92.2% | 30.3% |
| 3598026 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.68 | 56.0 | 3.95e-01 | 92.2% | 29.4% |
| 4281111 | 302.1.1.0 ↗ | a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain | 0.68 | 52.0 | 3.72e-01 | 86.3% | 75.6% |
| 3970216 | 4166.1.1.0 ↗ | beta sandwiches › Lactophage receptor-binding protein N-terminal domain-like › Lactophage receptor-binding protein N-terminal domain-like › Lactophage receptor-binding protein N-terminal domain-like | 0.64 | 54.0 | 3.70e-01 | 96.1% | 81.1% |
| 3816149 | 263.1.1.0 ↗ | a+b three layers › SRF-like › SRF-like › SRF-like | 0.57 | 51.0 | 4.43e-01 | 100.0% | 92.3% |
| 5030597 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.57 | 48.0 | 3.45e-01 | 96.1% | 73.1% |
| 4288637 | 222.1.1.17 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › PKS_DH_N | 0.57 | 49.0 | 3.53e-01 | 100.0% | 71.2% |
| 3735060 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.56 | 49.0 | 2.92e-01 | 96.1% | 90.4% |
| 3194823 | 206.1.1.11 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › APH | 0.56 | 43.0 | 2.70e-01 | 90.2% | 30.7% |
| 3915879 | 304.12.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal protein S6 › Ribosomal protein S6 | 0.56 | 46.0 | 3.70e-01 | 98.0% | 47.3% |
| 4201083 | 304.12.1.1 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal protein S6 › Ribosomal protein S6 › Ribosomal_S6 | 0.55 | 41.0 | 3.46e-01 | 86.3% | 52.0% |
| 3723860 | 387.1.5.0 ↗ | few secondary structure elements › omega toxin-like › omega toxin-related › Scorpion toxin-like | 0.53 | 41.0 | 4.34e-01 | 84.3% | 97.8% |
| 4313045 | 304.12.1.1 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal protein S6 › Ribosomal protein S6 › Ribosomal_S6 | 0.53 | 44.0 | 3.64e-01 | 94.1% | 57.4% |
| 4952059 | 809.2.1.0 ↗ | a+b two layers › BLIP-like › BT0923-like › BT0923-like | 0.52 | 42.0 | 3.68e-01 | 90.2% | 63.7% |