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KT724718.1__ALJ98244.1__BiPBO1_30__00030

Bact-Vir

KT724718.1__ALJ98244.1__BiPBO1_30__00030

Identity

Accession:
KT724718 ↗
Kingdom:
phage

Quality

72.7 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 6-41
PDB
D2 medium residues 50-133
PDB
CATH (20)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2je6I02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.62 45.0 4.52e-01 78.6% 88.6%
4uhvA04 2.40.50.230 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Gp5 N-terminal domain 0.59 41.0 3.85e-01 72.6% 83.5%
6o38A04 2.60.120.1230 Mainly Beta › Sandwich › Jelly Rolls › 0.58 43.0 4.28e-01 100.0% 75.3%
3am2A02 2.60.120.1050 Mainly Beta › Sandwich › Jelly Rolls › 0.56 48.0 4.37e-01 97.6% 94.0%
1lm0A00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.55 48.0 4.59e-01 100.0% 90.1%
1id2A00 2.60.40.420 Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins 0.55 42.0 3.99e-01 97.6% 67.9%
3abgB01 2.60.40.420 Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins 0.54 46.0 3.79e-01 97.6% 59.9%
2f4lA01 2.60.120.580 Mainly Beta › Sandwich › Jelly Rolls › Acetamidase/Formamidase-like domains 0.54 45.0 3.79e-01 96.4% 62.9%
2wuhA00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.53 43.0 3.65e-01 95.2% 76.7%
2qqkA02 2.60.120.290 Mainly Beta › Sandwich › Jelly Rolls › Spermadhesin, CUB domain 0.53 45.0 4.12e-01 97.6% 87.8%
2ux6A00 2.60.40.420 Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins 0.53 42.0 3.79e-01 97.6% 61.5%
5fc9A00 2.60.40.420 Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins 0.52 44.0 4.26e-01 97.6% 84.2%
3g5wA02 2.60.40.420 Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins 0.52 44.0 3.65e-01 97.6% 69.3%
6evgA03 2.60.40.420 Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins 0.52 45.0 3.78e-01 97.6% 79.5%
4knuA02 2.60.40.420 Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins 0.52 44.0 3.66e-01 97.6% 75.5%
6k3dA03 2.60.40.420 Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins 0.52 44.0 3.77e-01 97.6% 80.7%
1ifrA00 2.60.40.1260 Mainly Beta › Sandwich › Immunoglobulin-like › Lamin Tail domain 0.51 40.0 3.71e-01 88.1% 74.3%
2as0A01 2.30.130.10 Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › PUA domain 0.50 38.0 4.05e-01 82.1% 97.1%
2dv6A01 2.60.40.420 Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins 0.50 43.0 3.96e-01 98.8% 77.0%
2cuaB00 2.60.40.420 Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins 0.50 43.0 3.77e-01 97.6% 65.9%
ECOD (17)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4066515 2.1.1.107 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RRP40_S1 0.63 46.0 4.65e-01 77.4% 88.2%
5043741 2.1.1.21 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Methyltrn_RNA_3 0.63 46.0 4.84e-01 100.0% 86.7%
5003346 3156.1.1.0 beta sandwiches › Cupredoxin-like › Cupredoxin-related › Cupredoxin-related 0.57 41.0 4.13e-01 98.8% 76.5%
4266802 3156.1.1.0 beta sandwiches › Cupredoxin-like › Cupredoxin-related › Cupredoxin-related 0.56 43.0 4.23e-01 97.6% 78.7%
3676965 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.54 45.0 3.92e-01 95.2% 70.0%
4928542 3156.1.1.0 beta sandwiches › Cupredoxin-like › Cupredoxin-related › Cupredoxin-related 0.54 42.0 4.23e-01 96.4% 83.5%
4200563 3156.1.1.0 beta sandwiches › Cupredoxin-like › Cupredoxin-related › Cupredoxin-related 0.53 42.0 3.90e-01 98.8% 66.4%
3291538 3156.1.1.0 beta sandwiches › Cupredoxin-like › Cupredoxin-related › Cupredoxin-related 0.53 40.0 4.08e-01 96.4% 83.5%
3476250 10.32.1.2 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › F5_F8_type_C 0.52 42.0 3.40e-01 94.0% 71.1%
4952116 3156.1.1.13 beta sandwiches › Cupredoxin-like › Cupredoxin-related › Cupredoxin-related › Cupredoxin_1 0.52 43.0 4.22e-01 96.4% 83.0%
5030271 3156.1.1.0 beta sandwiches › Cupredoxin-like › Cupredoxin-related › Cupredoxin-related 0.52 45.0 4.33e-01 97.6% 84.7%
5038963 3156.1.1.0 beta sandwiches › Cupredoxin-like › Cupredoxin-related › Cupredoxin-related 0.52 44.0 3.96e-01 97.6% 77.6%
3784001 3156.1.1.14 beta sandwiches › Cupredoxin-like › Cupredoxin-related › Cupredoxin-related › hGDE_N 0.52 44.0 3.90e-01 97.6% 78.5%
3415803 10.32.1.2 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › F5_F8_type_C 0.51 41.0 3.50e-01 95.2% 78.1%
3181872 3156.1.1.0 beta sandwiches › Cupredoxin-like › Cupredoxin-related › Cupredoxin-related 0.51 44.0 3.75e-01 98.8% 93.8%
5040585 3156.1.1.0 beta sandwiches › Cupredoxin-like › Cupredoxin-related › Cupredoxin-related 0.51 43.0 3.83e-01 96.4% 75.2%
3214855 10.4.1.9 beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › CUB_2 0.50 42.0 3.94e-01 97.6% 94.5%
D3 medium residues 255-303_315-326_377-400
PDB
Domain cluster: representative
D4 medium residues 436-621
PDB
Domain cluster: representative
CATH (30)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3gq8A01 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.86 83.0 5.98e-01 100.0% 62.7%
3zppA00 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.86 82.0 6.12e-01 100.0% 67.5%
2vbkA00 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.86 82.0 5.77e-01 99.5% 52.3%
7chuA01 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.86 82.0 6.37e-01 99.5% 65.3%
4c2lA00 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.85 81.0 6.26e-01 100.0% 73.1%
6kqsA01 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.85 81.0 5.98e-01 99.5% 72.6%
1ru4A00 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.85 81.0 6.10e-01 100.0% 56.5%
2vjiA02 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.83 79.0 5.84e-01 100.0% 64.0%
3riqA00 2.160.20.20 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › 0.83 79.0 5.49e-01 100.0% 60.6%
1bheA00 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.83 79.0 6.08e-01 100.0% 63.8%
1k5cA00 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.82 78.0 6.27e-01 100.0% 76.6%
7dmkA02 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.82 76.0 6.33e-01 97.3% 74.9%
5z9tA01 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.81 75.0 5.41e-01 98.4% 65.5%
5gkdA02 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.79 73.0 6.21e-01 97.3% 86.3%
4mxnB00 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.78 70.0 6.54e-01 95.2% 92.9%
3b4nA02 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.77 68.0 6.34e-01 92.5% 88.9%
3n6zA01 2.160.20.110 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › 0.76 70.0 6.14e-01 96.8% 92.1%
1ee6A00 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.76 70.0 6.92e-01 97.3% 93.9%
1gq8A00 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.76 70.0 5.75e-01 96.8% 84.0%
2bm5B00 2.160.20.80 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › E3 ubiquitin-protein ligase SopA 0.74 58.0 5.97e-01 97.3% 84.4%
2j8kA01 2.160.20.80 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › E3 ubiquitin-protein ligase SopA 0.74 58.0 6.04e-01 97.8% 87.9%
5jlvC00 2.160.20.80 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › E3 ubiquitin-protein ligase SopA 0.71 38.0 5.23e-01 73.7% 100.0%
3p4gD00 2.160.20.160 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › 0.71 62.0 5.16e-01 99.5% 54.8%
2w7zA00 2.160.20.80 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › E3 ubiquitin-protein ligase SopA 0.69 60.0 5.80e-01 96.2% 82.1%
1k4zA00 2.160.20.70 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › 0.67 53.0 5.70e-01 98.4% 95.5%
4oj5C04 2.160.20.130 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › 0.67 60.0 6.07e-01 94.6% 100.0%
1k8fA00 2.160.20.70 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › 0.66 54.0 5.81e-01 93.5% 100.0%
3bh7B01 2.160.20.70 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › 0.64 57.0 5.62e-01 91.9% 99.0%
4ecnA03 3.80.10.10 Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor 0.64 57.0 4.01e-01 97.8% 32.0%
3nb2A01 2.160.20.80 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › E3 ubiquitin-protein ligase SopA 0.62 55.0 5.61e-01 96.8% 98.3%
ECOD (42)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5050079 207.2.1.22 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix 0.89 79.0 7.23e-01 98.4% 73.2%
4944456 207.2.1.22 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix 0.87 82.0 7.71e-01 97.3% 84.2%
5044622 207.2.1.13 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD 0.86 83.0 5.60e-01 99.5% 57.9%
5074604 207.2.1.22 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix 0.86 83.0 6.33e-01 100.0% 56.0%
4946035 207.2.1.22 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix 0.86 81.0 5.78e-01 98.9% 46.2%
4944811 207.2.1.22 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix 0.84 79.0 7.60e-01 96.8% 92.2%
3804144 207.2.1.1 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Glyco_hydro_28 0.84 81.0 5.91e-01 100.0% 60.3%
4167706 207.2.1.1 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Glyco_hydro_28 0.84 81.0 6.02e-01 100.0% 64.6%
5081707 207.2.1.22 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix 0.84 80.0 6.51e-01 98.9% 61.9%
5060991 207.2.1.13 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD 0.84 80.0 6.30e-01 99.5% 63.4%
4944057 207.2.1.13 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD 0.84 79.0 6.69e-01 97.3% 78.8%
5033195 207.2.1.13 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD 0.84 79.0 7.10e-01 98.4% 80.7%
3824788 207.2.1.1 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Glyco_hydro_28 0.84 80.0 6.35e-01 100.0% 72.3%
5032606 207.2.1.13 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD 0.83 80.0 6.24e-01 99.5% 57.2%
4970402 207.2.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like 0.83 80.0 6.85e-01 100.0% 93.4%
3354845 207.2.1.1 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Glyco_hydro_28 0.83 80.0 6.03e-01 100.0% 64.8%
4024907 208.1.1.0 beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes 0.83 55.0 6.59e-01 84.4% 98.4%
4980411 207.2.1.22 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix 0.83 77.0 6.42e-01 97.3% 70.7%
4024163 207.9.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pentapeptide repeats › Pentapeptide repeats 0.82 64.0 6.75e-01 97.3% 89.7%
3254326 207.2.1.43 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Chlam_PMP 0.81 77.0 6.22e-01 99.5% 75.2%
4981811 207.2.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like 0.81 77.0 6.27e-01 98.4% 59.0%
5047146 207.2.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like 0.80 70.0 7.04e-01 90.3% 94.1%
3708837 207.9.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pentapeptide repeats › Pentapeptide repeats 0.80 63.0 6.52e-01 97.3% 86.9%
3254555 207.2.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like 0.80 75.0 6.48e-01 99.5% 84.7%
5035023 207.2.1.22 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix 0.78 71.0 6.01e-01 96.8% 61.8%
3714192 207.2.1.52 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like 0.77 72.0 4.65e-01 99.5% 35.5%
3901107 207.6.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Serralysin-like metalloprotease-C › Serralysin-like metalloprotease-C 0.77 49.0 5.96e-01 93.5% 98.3%
3787858 207.9.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pentapeptide repeats › Pentapeptide repeats 0.76 52.0 5.75e-01 96.2% 85.3%
4027041 207.9.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pentapeptide repeats › Pentapeptide repeats 0.76 62.0 6.36e-01 99.5% 89.7%
3703549 207.2.1.52 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like 0.75 70.0 5.68e-01 98.4% 68.2%
4027019 207.9.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pentapeptide repeats › Pentapeptide repeats 0.75 56.0 6.24e-01 97.3% 97.2%
3717205 207.2.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like 0.74 65.0 4.58e-01 97.8% 32.4%
3798495 207.6.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Serralysin-like metalloprotease-C › Serralysin-like metalloprotease-C 0.74 66.0 6.07e-01 98.4% 74.8%
3528957 207.6.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Serralysin-like metalloprotease-C › Serralysin-like metalloprotease-C 0.73 64.0 6.20e-01 97.8% 83.9%
3336085 207.9.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pentapeptide repeats › Pentapeptide repeats 0.72 63.0 6.16e-01 97.8% 84.7%
3763790 208.2.1.6 beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Adhesin YadA, collagen-binding domain › Adhesin YadA, collagen-binding domain › SVS_QK 0.72 46.0 5.35e-01 97.3% 88.9%
3621708 207.9.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pentapeptide repeats › Pentapeptide repeats 0.71 63.0 6.46e-01 97.3% 96.6%
3441653 208.1.1.0 beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes 0.71 49.0 5.46e-01 94.1% 89.7%
3532238 207.1.1.122 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FAM47 0.69 62.0 6.20e-01 98.4% 95.3%
3532239 207.2.1.68 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › FAM47 0.69 62.0 5.09e-01 98.4% 53.8%
3855439 207.8.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Stabilizer of iron transporter sufD › Stabilizer of iron transporter sufD 0.68 63.0 5.44e-01 100.0% 79.3%
3459646 207.4.1.2 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › C-CAP/cofactor C-like › C-CAP/cofactor C-like › CAP_C 0.64 55.0 5.80e-01 96.8% 100.0%