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KT724718.1__ALJ98263.1__BiPBO1_49__00049
Bact-VirKT724718.1__ALJ98263.1__BiPBO1_49__00049
Identity
- Accession:
- KT724718 ↗
- Kingdom:
- phage
Quality
60.0
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 144-206
Domain cluster:
representative
CATH (17)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4xtvB02 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.73 | 51.0 | 5.53e-01 | 87.3% | 95.8% |
| 1hxdA03 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.69 | 46.0 | 5.09e-01 | 84.1% | 100.0% |
| 2eayB02 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.68 | 48.0 | 5.24e-01 | 90.5% | 98.0% |
| 1ex4B02 | 2.30.30.10 | Mainly Beta › Roll › SH3 type barrels. › Integrase, C-terminal domain superfamily, retroviral | 0.63 | 46.0 | 4.73e-01 | 87.3% | 84.7% |
| 3kihC01 | 2.20.25.510 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.60 | 32.0 | 3.88e-01 | 74.6% | 91.2% |
| 4b9wA02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.60 | 43.0 | 4.51e-01 | 87.3% | 87.5% |
| 5egwA00 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.60 | 50.0 | 3.20e-01 | 100.0% | 26.7% |
| 2fjrA02 | 2.10.109.10 | Mainly Beta › Ribbon › Umud Fragment, subunit A › Umud Fragment, subunit A | 0.60 | 43.0 | 3.63e-01 | 93.7% | 43.4% |
| 7cceA01 | 2.30.30.490 | Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain | 0.58 | 47.0 | 3.69e-01 | 96.8% | 57.0% |
| 6uzjA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.54 | 43.0 | 4.30e-01 | 90.5% | 98.4% |
| 3pieC05 | 2.170.260.40 | Mainly Beta › Beta Complex › paz domain › | 0.54 | 44.0 | 3.42e-01 | 100.0% | 92.2% |
| 2dmoA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.53 | 40.0 | 4.00e-01 | 84.1% | 80.9% |
| 3t0pA01 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.53 | 39.0 | 2.95e-01 | 82.5% | 63.4% |
| 3nksA00 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.52 | 43.0 | 2.63e-01 | 96.8% | 58.9% |
| 6p2uA02 | 3.30.30.30 | Alpha Beta › 2-Layer Sandwich › Defensin A-like › | 0.51 | 35.0 | 3.78e-01 | 95.2% | 88.5% |
| 1b77A00 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.51 | 43.0 | 2.93e-01 | 93.7% | 36.8% |
| 4paaA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.51 | 42.0 | 2.91e-01 | 96.8% | 58.0% |
ECOD (34)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 145704 | 4.1.1.28 ↗ | beta barrels › SH3 › SH3 › SH3 › BPL_C | 0.71 | 52.0 | 5.42e-01 | 90.5% | 86.2% |
| 4927385 | 4.1.1.28 ↗ | beta barrels › SH3 › SH3 › SH3 › BPL_C | 0.68 | 50.0 | 5.33e-01 | 88.9% | 100.0% |
| 3221711 | 221.1.1.112 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › ULD_3 | 0.68 | 57.0 | 4.84e-01 | 100.0% | 91.3% |
| 5038496 | 4.1.1.28 ↗ | beta barrels › SH3 › SH3 › SH3 › BPL_C | 0.67 | 42.0 | 4.75e-01 | 79.4% | 100.0% |
| 3530891 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.62 | 55.0 | 4.59e-01 | 100.0% | 67.9% |
| 4278911 | 4.8.1.5 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › LytTR | 0.62 | 43.0 | 4.72e-01 | 79.4% | 92.0% |
| 3995290 | 4.1.1.332 ↗ | beta barrels › SH3 › SH3 › SH3 › Peptidase_C1 | 0.62 | 52.0 | 4.46e-01 | 100.0% | 91.8% |
| 4139778 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.62 | 53.0 | 5.12e-01 | 100.0% | 86.3% |
| 4112791 | 4.8.1.5 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › LytTR | 0.61 | 43.0 | 4.68e-01 | 79.4% | 92.0% |
| 3434623 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.61 | 51.0 | 3.67e-01 | 100.0% | 48.3% |
| 3616247 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.61 | 54.0 | 4.70e-01 | 100.0% | 95.9% |
| 3217266 | 11.1.1.532 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C6 | 0.61 | 51.0 | 4.81e-01 | 92.1% | 94.7% |
| 3786328 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.61 | 48.0 | 3.66e-01 | 88.9% | 49.0% |
| 3617140 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.61 | 51.0 | 3.33e-01 | 100.0% | 31.3% |
| 3409460 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.60 | 50.0 | 4.38e-01 | 100.0% | 70.5% |
| 4937731 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.59 | 48.0 | 4.90e-01 | 98.4% | 100.0% |
| 3235619 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.59 | 42.0 | 2.73e-01 | 81.0% | 16.1% |
| 3965860 | 3523.1.1.1 ↗ | beta meanders › Periplasmic lipopolysaccharide transport protein LptA (YhbN) › Periplasmic lipopolysaccharide transport protein LptA (YhbN) › Periplasmic lipopolysaccharide transport protein LptA (YhbN) › LptF_LptG | 0.59 | 48.0 | 4.24e-01 | 95.2% | 79.0% |
| 3583597 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.58 | 45.0 | 4.11e-01 | 96.8% | 63.3% |
| 4009391 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.57 | 42.0 | 3.93e-01 | 79.4% | 82.5% |
| 3234632 | 389.1.2.9 ↗ | few secondary structure elements › EGF-like › EGF-related › Complement control module/SCR domain › C6 | 0.57 | 49.0 | 4.40e-01 | 98.4% | 95.6% |
| 3810562 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.57 | 46.0 | 4.49e-01 | 100.0% | 92.0% |
| 5029166 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.55 | 45.0 | 4.38e-01 | 95.2% | 98.6% |
| 3935716 | 4.8.1.6 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Tudor-knot | 0.54 | 44.0 | 4.23e-01 | 95.2% | 88.0% |
| 4317534 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.54 | 42.0 | 2.88e-01 | 87.3% | 40.4% |
| 5010031 | 4.11.1.0 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase | 0.54 | 45.0 | 3.81e-01 | 100.0% | 60.0% |
| 3227822 | 207.1.1.52 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FBA_2 | 0.53 | 36.0 | 2.60e-01 | 79.4% | 20.9% |
| 3501834 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.53 | 42.0 | 3.95e-01 | 93.7% | 92.9% |
| 4849749 | 4959.1.1.0 ↗ | a+b complex topology › first helical domain in RNA-polymerase beta-prime subunit › first helical domain in RNA-polymerase beta-prime subunit › first helical domain in RNA-polymerase beta-prime subunit | 0.53 | 28.0 | 2.71e-01 | 82.5% | 38.7% |
| None | — | 0.53 | 45.0 | 3.04e-01 | 96.8% | 64.5% | |
| 3628460 | 3308.1.1.0 ↗ | beta duplicates or obligate multimers › periplasmic lysozyme inhibitor of I-type lysozyme-like › periplasmic lysozyme inhibitor of I-type lysozyme › periplasmic lysozyme inhibitor of I-type lysozyme | 0.52 | 40.0 | 3.76e-01 | 85.7% | 93.8% |
| 5980 | 227.1.1.9 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_PPF | 0.51 | 43.0 | 3.59e-01 | 93.7% | 76.4% |
| 4931822 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.51 | 38.0 | 3.83e-01 | 95.2% | 84.6% |
| 3989972 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.50 | 42.0 | 3.91e-01 | 100.0% | 83.5% |
D2
medium
residues 1-54
D3
medium
residues 55-133