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KT724718.1__ALJ98284.1__BiPBO1_70__00070
Bact-VirKT724718.1__ALJ98284.1__BiPBO1_70__00070
Identity
- Accession:
- KT724718 ↗
- Kingdom:
- phage
Quality
84.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-70
Domain cluster:
representative
CATH (15)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1zboA02 | 1.10.4060.10 | Mainly Alpha › Orthogonal Bundle › LON domain-like fold › BPP1347 like domain | 0.68 | 61.0 | 5.73e-01 | 100.0% | 94.0% |
| 3ljcA02 | 1.20.58.1480 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.68 | 61.0 | 4.97e-01 | 100.0% | 59.5% |
| 2lc3A00 | 1.10.720.80 | Mainly Alpha › Orthogonal Bundle › Transcription Termination Factor Rho, Rna-binding Domain; Chain A, Domain 1 › | 0.61 | 45.0 | 4.27e-01 | 82.4% | 78.4% |
| 1v32A00 | 1.10.245.10 | Mainly Alpha › Orthogonal Bundle › MDM2 › SWIB/MDM2 domain | 0.61 | 50.0 | 4.45e-01 | 92.6% | 74.3% |
| 2ibdA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.59 | 35.0 | 4.06e-01 | 86.8% | 86.7% |
| 2n7zA00 | 1.10.533.10 | Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas | 0.59 | 45.0 | 3.93e-01 | 100.0% | 53.8% |
| 2dbhA01 | 1.10.533.10 | Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas | 0.57 | 43.0 | 4.14e-01 | 98.5% | 69.6% |
| 4ikmA02 | 1.10.533.10 | Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas | 0.57 | 41.0 | 3.71e-01 | 100.0% | 55.9% |
| 7uuim02 | 1.10.1580.10 | Mainly Alpha › Orthogonal Bundle › Conserved Hypothetical Protein Ylqf; Chain: A; domain 2 › | 0.56 | 44.0 | 4.25e-01 | 89.7% | 96.3% |
| 1j9aA00 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.54 | 48.0 | 3.52e-01 | 100.0% | 94.6% |
| 5nohA00 | 1.20.120.1350 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Pneumovirus matrix protein 2 (M2), zinc-binding domain | 0.54 | 47.0 | 4.16e-01 | 100.0% | 99.0% |
| 1xzpA02 | 1.20.120.430 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › tRNA modification GTPase MnmE domain 2 | 0.54 | 42.0 | 3.26e-01 | 86.8% | 59.0% |
| 3euhC02 | 1.10.10.2260 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › MukE-like family, C-terminal domain | 0.54 | 44.0 | 3.87e-01 | 94.1% | 87.0% |
| 4gkfA00 | 1.10.520.30 | Mainly Alpha › Orthogonal Bundle › Peroxidase; domain 1 › AF1862-like domain | 0.50 | 39.0 | 3.16e-01 | 88.2% | 70.5% |
| 3mfnB00 | 1.20.120.330 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 | 0.50 | 41.0 | 3.54e-01 | 100.0% | 61.9% |
ECOD (13)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3503155 | 170.2.1.0 ↗ | alpha bundles › Retrovirus capsid protein › Retrovirus capsid protein N-terminal domain › Retrovirus capsid protein N-terminal domain | 0.65 | 49.0 | 5.06e-01 | 92.6% | 86.2% |
| 3928200 | 193.1.1.36 ↗ | alpha bundles › CH domain-like › Calponin-homology domain-like › Calponin-homology domain-like › PF28958 | 0.64 | 55.0 | 4.48e-01 | 100.0% | 74.1% |
| 3245015 | 3831.1.1.0 ↗ | alpha bundles › Secreted protein of unknown function DUF1311 › Secreted protein of unknown function DUF1311 › Secreted protein of unknown function DUF1311 | 0.63 | 43.0 | 4.12e-01 | 70.6% | 93.8% |
| 3798911 | 170.2.1.8 ↗ | alpha bundles › Retrovirus capsid protein › Retrovirus capsid protein N-terminal domain › Retrovirus capsid protein N-terminal domain › DUF1759 | 0.60 | 48.0 | 4.62e-01 | 92.6% | 78.8% |
| 5075517 | 5069.1.1.0 ↗ | alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Transmembrane di-heme cytochromes | 0.58 | 49.0 | 3.91e-01 | 98.5% | 95.9% |
| 4651060 | 633.22.1.0 ↗ | alpha bundles › Bromodomain-like › Vitamin K epoxide reductase (VKOR) › Vitamin K epoxide reductase (VKOR) | 0.55 | 37.0 | 2.86e-01 | 70.6% | 87.9% |
| 3549717 | 3016.1.1.2 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › Aminotran_3 | 0.54 | 45.0 | 3.28e-01 | 100.0% | 40.5% |
| 3967319 | 5069.1.1.0 ↗ | alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Transmembrane di-heme cytochromes | 0.53 | 44.0 | 3.64e-01 | 92.6% | 78.4% |
| 3887948 | 110.1.1.2 ↗ | alpha arrays › DEATH domain › DEATH domain › DEATH domain › CARD | 0.53 | 39.0 | 3.51e-01 | 94.1% | 55.0% |
| 3968117 | 4953.1.1.0 ↗ | beta barrels › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like | 0.53 | 39.0 | 3.27e-01 | 83.8% | 81.5% |
| 3584767 | 5050.1.1.0 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter | 0.52 | 36.0 | 2.61e-01 | 75.0% | 78.3% |
| 3538468 | 110.1.1.1 ↗ | alpha arrays › DEATH domain › DEATH domain › DEATH domain › Death | 0.52 | 43.0 | 3.63e-01 | 100.0% | 54.2% |
| 5029389 | 601.17.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › Group V grass pollen allergen › Group V grass pollen allergen | 0.52 | 37.0 | 2.97e-01 | 76.5% | 60.7% |
D2
high
residues 81-151
Domain cluster:
representative
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1wixA01 | 1.10.418.10 | Mainly Alpha › Orthogonal Bundle › Actin-binding Protein, T-fimbrin; domain 1 › Calponin-like domain | 0.62 | 53.0 | 4.14e-01 | 94.4% | 85.6% |
| 4ci1B03 | 1.20.58.1480 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.60 | 44.0 | 4.47e-01 | 80.3% | 91.3% |
| 1v66A00 | 1.10.720.30 | Mainly Alpha › Orthogonal Bundle › Transcription Termination Factor Rho, Rna-binding Domain; Chain A, Domain 1 › SAP domain | 0.59 | 43.0 | 4.44e-01 | 95.8% | 87.7% |
| 4gytA00 | 1.20.120.740 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › YgfB uncharacterised protein family PF03695 | 0.57 | 41.0 | 3.16e-01 | 77.5% | 98.9% |
| 4fwiB00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.53 | 43.0 | 2.91e-01 | 97.2% | 21.6% |
| 1wh4A01 | 1.10.533.10 | Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas | 0.53 | 44.0 | 4.13e-01 | 100.0% | 85.1% |
| 2zopA00 | 1.10.520.30 | Mainly Alpha › Orthogonal Bundle › Peroxidase; domain 1 › AF1862-like domain | 0.53 | 41.0 | 3.68e-01 | 91.5% | 67.0% |
| 6k4yI00 | 1.10.1810.10 | Mainly Alpha › Orthogonal Bundle › Anti-sigma factor AsiA › Anti-Sigma Factor A | 0.51 | 40.0 | 3.73e-01 | 84.5% | 75.0% |
ECOD (3)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3501989 | 4143.1.1.0 ↗ | a+b two layers › THUMP domain-like › THUMP domain-like › THUMP domain-like | 0.59 | 51.0 | 4.09e-01 | 98.6% | 68.7% |
| 3472710 | 101.1.4.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › Pou | 0.55 | 45.0 | 3.94e-01 | 94.4% | 67.8% |
| 3892814 | 108.1.1.68 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand › TPGS1_C | 0.52 | 38.0 | 2.87e-01 | 78.9% | 38.5% |