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KT820175.1__ANH49065.1__X__00018

Bact-Vir

KT820175.1__ANH49065.1__X__00018

Identity

Accession:
KT820175 ↗
Kingdom:
phage

Quality

87.5 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Ruegeria_phage_45A6

TaxID: 1851646

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 5-69
PDB
Domain cluster: representative
CATH (44)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1r7lA00 3.30.2120.10 Alpha Beta › 2-Layer Sandwich › Bacillus phage protein › Bacillus phage protein-like 0.76 52.0 4.39e-01 70.8% 44.7%
2l2nA00 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.75 58.0 5.69e-01 83.1% 94.4%
1gqeA03 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.74 58.0 5.40e-01 86.2% 89.2%
7r97A02 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.72 52.0 5.15e-01 75.4% 88.2%
2nugB02 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.72 54.0 5.25e-01 80.0% 85.9%
3tqmA00 3.30.160.100 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Ribosome hibernation promotion factor-like 0.71 55.0 4.97e-01 84.6% 67.8%
2ltsA00 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.71 54.0 4.91e-01 81.5% 61.6%
2dmyA00 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.70 52.0 4.49e-01 78.5% 57.7%
2yztA00 3.30.160.250 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.69 52.0 5.24e-01 100.0% 80.3%
1whqA01 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.69 54.0 5.29e-01 84.6% 88.7%
3k6qA02 3.30.160.620 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.69 60.0 5.44e-01 98.5% 84.3%
3f6gA01 3.30.160.740 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.66 52.0 5.50e-01 98.5% 96.6%
3zm6A02 3.40.1190.10 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Mur-like, catalytic domain 0.65 47.0 3.31e-01 80.0% 25.6%
2l33A00 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.64 49.0 4.45e-01 83.1% 67.0%
2ltrA00 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.64 57.0 4.88e-01 100.0% 76.2%
2kvtA00 3.30.730.30 Alpha Beta › 2-Layer Sandwich › GCC-box Binding Domain › YaiA protein 0.63 47.0 4.61e-01 81.5% 84.5%
4iapA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.63 39.0 3.45e-01 93.8% 44.6%
1e8cA02 3.40.1190.10 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Mur-like, catalytic domain 0.62 46.0 3.18e-01 81.5% 22.7%
1wiiA01 2.20.25.190 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › 0.62 43.0 4.46e-01 73.8% 82.3%
1qw2A00 3.30.1980.10 Alpha Beta › 2-Layer Sandwich › Hypothetical protein Ta1206 fold › Hypothetical protein YunC 0.59 41.0 3.67e-01 75.4% 84.3%
4hasA00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.59 46.0 3.96e-01 84.6% 82.7%
4gzuA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.59 41.0 3.18e-01 76.9% 32.0%
4hhvA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.59 43.0 3.67e-01 84.6% 48.5%
2yt4A03 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.58 49.0 4.30e-01 96.9% 66.3%
1w0pA01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.58 41.0 2.99e-01 73.8% 36.2%
1xteA00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.58 42.0 3.65e-01 83.1% 79.3%
8a6tB01 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.58 40.0 3.22e-01 73.8% 69.3%
1asuA00 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.57 49.0 3.74e-01 100.0% 51.9%
2rajA02 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.56 42.0 3.49e-01 84.6% 74.6%
2ldkA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.55 46.0 3.54e-01 100.0% 98.3%
2dhkA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.55 41.0 3.60e-01 89.2% 52.0%
1zc3B00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.55 41.0 3.47e-01 81.5% 45.9%
7byjA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.55 40.0 3.61e-01 98.5% 53.7%
2dn6A00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.55 42.0 3.59e-01 86.2% 48.7%
3p0cA00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.54 41.0 3.57e-01 86.2% 80.2%
4hdoA03 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.54 35.0 3.13e-01 76.9% 46.7%
2zyrA02 2.60.40.2190 Mainly Beta › Sandwich › Immunoglobulin-like › 0.54 36.0 3.26e-01 70.8% 86.2%
4tyzA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.53 39.0 3.34e-01 100.0% 46.8%
2db5A00 2.30.42.10 Mainly Beta › Roll › Pdz3 Domain › PDZ domain 0.53 41.0 3.36e-01 86.2% 53.9%
1vwxk00 3.30.720.90 Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › 0.53 36.0 3.61e-01 96.9% 66.7%
3rc2A02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.53 43.0 3.06e-01 87.7% 79.5%
3i9v700 3.30.920.80 Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › NADH-quinone oxidoreductase, subunit 15 0.53 39.0 3.21e-01 80.0% 52.0%
3cqyB01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.52 46.0 3.34e-01 100.0% 65.8%
4jbmB01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.51 38.0 3.49e-01 86.2% 82.3%
ECOD (69)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5020790 4100.1.1.0 ↗ a+b duplicates or obligate multimers › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like 0.82 59.0 6.42e-01 96.9% 89.1%
5020788 4100.1.1.0 ↗ a+b duplicates or obligate multimers › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like 0.78 58.0 5.84e-01 89.2% 78.5%
5061231 4100.1.1.0 ↗ a+b duplicates or obligate multimers › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like 0.77 60.0 6.18e-01 98.5% 91.7%
3619264 330.1.1.1 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.76 62.0 5.54e-01 87.7% 66.7%
5826 330.5.1.2 ↗ a+b two layers › dsRBD-like › Bacillus phage protein › Bacillus phage protein › Phage_ABA_S 0.76 52.0 4.39e-01 70.8% 44.7%
4965851 4100.1.1.9 ↗ a+b duplicates or obligate multimers › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › DUF7387 0.75 51.0 5.54e-01 76.9% 83.6%
3299579 330.1.1.1 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.75 60.0 5.90e-01 86.2% 88.6%
4969162 4100.1.1.0 ↗ a+b duplicates or obligate multimers › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like 0.75 56.0 5.79e-01 84.6% 85.0%
3329514 330.1.1.1 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.75 56.0 5.24e-01 80.0% 77.5%
5015133 4100.1.1.9 ↗ a+b duplicates or obligate multimers › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › DUF7387 0.74 57.0 5.89e-01 90.8% 88.3%
4966382 4100.1.1.0 ↗ a+b duplicates or obligate multimers › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like 0.74 56.0 5.67e-01 84.6% 81.5%
3403381 330.1.1.1 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.73 55.0 4.76e-01 80.0% 58.0%
3510695 330.1.1.0 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.73 57.0 5.36e-01 84.6% 72.5%
3596522 330.1.1.0 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.73 65.0 5.46e-01 100.0% 77.3%
5021439 330.1.1.1 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.73 51.0 4.91e-01 73.8% 74.7%
3515433 330.1.1.1 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.72 56.0 5.61e-01 81.5% 93.8%
4023469 216.1.1.0 ↗ a+b two layers › UBC-like › UBC-like › UBC-like 0.72 57.0 4.47e-01 86.2% 66.4%
4568757 4100.1.1.0 ↗ a+b duplicates or obligate multimers › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like 0.72 52.0 5.44e-01 96.9% 85.0%
3993443 330.1.1.1 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.72 59.0 5.60e-01 87.7% 76.0%
3408974 330.1.1.1 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.72 57.0 5.03e-01 86.2% 68.4%
3286982 330.6.1.0 ↗ a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain 0.70 53.0 4.51e-01 80.0% 51.9%
3780194 330.1.1.1 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.69 59.0 3.97e-01 93.8% 28.2%
3510389 330.1.1.0 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.69 59.0 5.35e-01 95.4% 75.3%
3520951 330.1.1.0 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.69 62.0 5.53e-01 100.0% 78.9%
3503204 330.1.1.1 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.69 62.0 5.42e-01 100.0% 80.0%
3408937 330.1.1.1 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.69 59.0 5.49e-01 93.8% 80.0%
3585833 330.1.1.1 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.67 59.0 4.93e-01 96.9% 64.5%
3709800 330.1.1.0 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.67 58.0 5.10e-01 95.4% 69.5%
3515207 330.1.1.1 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.66 59.0 5.26e-01 98.5% 75.6%
4969758 7089.1.1.0 ↗ a+b two layers › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD 0.66 58.0 5.16e-01 96.9% 77.8%
3234330 330.1.1.1 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.65 58.0 4.87e-01 100.0% 61.8%
3517153 330.1.1.1 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.64 56.0 5.21e-01 98.5% 77.5%
3903260 109.4.1.2707 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PH_21 0.64 54.0 3.27e-01 95.4% 16.8%
3730099 330.1.1.1 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.63 56.0 5.36e-01 100.0% 85.1%
3175837 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.60 48.0 3.81e-01 92.3% 54.0%
3777177 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.60 44.0 3.84e-01 89.2% 50.0%
3918975 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.60 44.0 3.71e-01 90.8% 45.2%
3516025 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.59 44.0 3.86e-01 81.5% 53.3%
3251342 277.1.1.1 ↗ a+b two layers › PX domain › PX domain › PX domain › PX 0.59 45.0 3.76e-01 84.6% 77.5%
3785991 241.15.1.3 ↗ a+b two layers › Type III secretory system chaperone-like › FP (Fbxo7/PI31) dimerization domain › FP (Fbxo7/PI31) dimerization domain › SPC25 0.59 43.0 3.81e-01 81.5% 61.5%
4258326 2004.1.1.714 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_13 0.58 48.0 3.22e-01 100.0% 70.8%
3549045 330.1.1.1 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.58 51.0 4.36e-01 100.0% 70.0%
4926797 295.1.1.0 ↗ a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain 0.58 42.0 3.38e-01 76.9% 57.7%
3927128 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.58 42.0 3.55e-01 87.7% 43.3%
3512851 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.58 44.0 3.50e-01 81.5% 40.0%
3567815 220.1.1.37 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_13 0.58 44.0 3.32e-01 87.7% 32.7%
3424116 4.1.1.12 ↗ beta barrels › SH3 › SH3 › SH3 › PWWP 0.57 40.0 3.28e-01 73.8% 80.0%
3791995 220.1.1.37 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_13 0.57 42.0 3.20e-01 81.5% 32.9%
3388849 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.57 42.0 3.29e-01 84.6% 35.9%
3867421 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.56 46.0 3.26e-01 100.0% 40.4%
4096988 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.56 42.0 2.94e-01 86.2% 22.6%
3393858 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.56 41.0 3.49e-01 98.5% 46.1%
3870917 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.56 42.0 3.23e-01 89.2% 33.3%
3762071 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.55 38.0 3.17e-01 80.0% 38.4%
3625596 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.55 41.0 3.85e-01 89.2% 65.0%
3890751 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.55 40.0 3.65e-01 100.0% 56.7%
3482603 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.55 38.0 3.39e-01 76.9% 48.0%
3906610 220.1.1.170 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_alsin 0.55 45.0 3.61e-01 93.8% 45.0%
3592181 220.1.1.74 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PIG-H 0.54 41.0 3.31e-01 93.8% 40.0%
3544618 4292.2.1.0 ↗ a+b two layers › FlaG-like › MAGUK binding stalk (MBS) domain › MAGUK binding stalk (MBS) domain 0.54 41.0 3.83e-01 86.2% 72.9%
3226259 2484.1.1.200 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › FTH 0.53 44.0 3.39e-01 98.5% 71.8%
3408369 284.1.3.4 ↗ a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain › CCTL2_WNK 0.53 40.0 3.86e-01 96.9% 73.3%
4995512 4294.1.1.2 ↗ few secondary structure elements › Trm112p-like › Trm112p-like › Trm112p-like › Trm112p 0.52 36.0 3.75e-01 75.4% 78.3%
3756865 220.1.1.170 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_alsin 0.52 44.0 3.44e-01 93.8% 46.4%
3705153 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.52 39.0 3.13e-01 83.1% 39.3%
3241305 295.1.1.3 ↗ a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › PurA 0.51 43.0 3.45e-01 98.5% 85.7%
3629491 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.51 35.0 3.71e-01 98.5% 89.1%
3744023 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.50 42.0 3.45e-01 95.4% 49.6%
3249582 896.1.1.3 ↗ a+b two layers › SRP9/14-like › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › SRP9-21 0.50 39.0 3.75e-01 98.5% 74.7%