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KT895374.1__ALN97759.1__Bp8pS_080__00080

Bact-Vir

KT895374.1__ALN97759.1__Bp8pS_080__00080

Identity

Accession:
KT895374 ↗
Kingdom:
phage

Quality

70.0 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Takahashivirus› Bacillus_phage_vB_BpuM-BpSp

TaxID: 1739968

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 23-72
PDB
Domain cluster: representative
CATH (14)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2jroA01 3.30.1910.10 Alpha Beta › 2-Layer Sandwich › so0334 like fold › so0334 like domain 0.72 48.0 4.37e-01 70.0% 84.6%
1vkwA01 3.40.109.10 Alpha Beta › 3-Layer(aba) Sandwich › NADH Oxidase › NADH Oxidase 0.70 48.0 3.56e-01 72.0% 43.8%
1vx7H01 3.90.930.12 Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › Ribosomal protein L6 0.68 52.0 4.33e-01 82.0% 90.6%
1yw5A01 2.20.70.10 Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › 0.64 41.0 3.82e-01 96.0% 52.4%
4mtnA01 3.30.1480.10 Alpha Beta › 2-Layer Sandwich › N Utilization Substance Protein A; Chain:P; domain 4 › NusA, N-terminal domain 0.62 44.0 3.46e-01 100.0% 38.9%
1s28A00 3.30.1460.10 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.60 48.0 3.51e-01 86.0% 60.0%
2bm0A03 3.30.70.870 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Elongation Factor G (Translational Gtpase), domain 3 0.59 37.0 3.75e-01 96.0% 60.8%
2ltsA00 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.58 43.0 3.53e-01 78.0% 91.9%
3fynA00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.58 50.0 3.55e-01 98.0% 69.7%
7neaA01 3.30.470.10 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › Aminotransferase class 4, branched-chain amino acid transferase, N-terminal domain 0.57 40.0 3.02e-01 74.0% 71.1%
2epbA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.56 44.0 4.11e-01 96.0% 69.1%
3t9yA00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.56 48.0 3.58e-01 98.0% 77.6%
1pc6A00 1.10.3790.10 Mainly Alpha › Orthogonal Bundle › NinB fold › NinB 0.56 44.0 3.24e-01 88.0% 84.4%
1neiA00 3.30.160.220 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › YoaG 0.53 45.0 4.25e-01 96.0% 88.3%
ECOD (21)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3963433 131.1.1.15 ↗ alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › Ppx-GppA_III 0.70 49.0 3.28e-01 74.0% 42.1%
3685955 304.3.1.0 ↗ a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain 0.69 51.0 4.31e-01 80.0% 69.4%
4383296 318.1.1.1 ↗ a+b two layers › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal_L6 0.68 47.0 4.03e-01 72.0% 75.0%
1514169 244.1.1.9 ↗ a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C › GMC_oxred_C 0.66 50.0 3.38e-01 82.0% 60.5%
3652791 109.4.1.1254 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, E_motif 0.64 44.0 2.41e-01 72.0% 5.2%
3540149 386.1.1.124 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-WIZ 0.62 37.0 4.29e-01 72.0% 85.7%
3697893 2004.1.1.250 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Kinesin,Microtub_bd 0.62 48.0 2.71e-01 84.0% 11.8%
4926837 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.61 42.0 4.04e-01 74.0% 100.0%
3716634 109.4.1.1357 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_2, TPR_16 0.61 45.0 2.72e-01 80.0% 23.9%
3452064 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.58 33.0 3.82e-01 88.0% 80.0%
3970701 560.1.1.0 ↗ few secondary structure elements › H-NS histone-like proteins, C-terminal domain › H-NS histone-like proteins, C-terminal domain › H-NS histone-like proteins, C-terminal domain 0.58 37.0 3.97e-01 80.0% 82.5%
3463429 109.4.1.1335 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2, E_motif 0.57 38.0 2.24e-01 100.0% 7.4%
3165049 3218.1.1.0 ↗ a+b duplicates or obligate multimers › small terminase oligomerization domain › small terminase oligomerization domain › small terminase oligomerization domain 0.56 40.0 3.63e-01 74.0% 90.8%
4351646 216.1.1.0 ↗ a+b two layers › UBC-like › UBC-like › UBC-like 0.54 47.0 3.15e-01 94.0% 31.4%
3419372 109.4.1.1254 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, E_motif 0.52 41.0 2.42e-01 88.0% 10.4%
4026211 252.2.1.1 ↗ a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like › AP2 0.52 42.0 4.28e-01 88.0% 90.0%
5056954 305.1.1.0 ↗ a+b two layers › DCoH-like › RBP11-like subunits of RNA polymerase › RBP11-like subunits of RNA polymerase 0.52 46.0 3.98e-01 98.0% 100.0%
4636115 272.1.1.0 ↗ a+b two layers › TolA/TonB C-terminal domain › TolA/TonB C-terminal domain › TolA/TonB C-terminal domain 0.51 35.0 3.06e-01 74.0% 77.6%
4944397 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.51 35.0 3.55e-01 82.0% 72.0%
3575490 386.1.1.0 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.51 33.0 3.47e-01 90.0% 77.8%
4890984 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.50 41.0 3.31e-01 94.0% 64.7%