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KT895374.1__ALN97800.1__Bp8pS_121__00121

Bact-Vir

KT895374.1__ALN97800.1__Bp8pS_121__00121

Identity

Accession:
KT895374 ↗
Kingdom:
phage

Quality

86.9 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Takahashivirus› Bacillus_phage_vB_BpuM-BpSp

TaxID: 1739968

Cluster

View cluster (2 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 48-101
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF01476.27 best LysM 34.3 2.60e-08 94.4% 97.7%
CATH (19)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4b8vA01 3.10.350.10 Alpha Beta › Roll › Membrane-bound Lytic Murein Transglycosylase D; Chain A › LysM domain 0.89 73.0 6.73e-01 100.0% 70.1%
5c8qB02 3.10.350.10 Alpha Beta › Roll › Membrane-bound Lytic Murein Transglycosylase D; Chain A › LysM domain 0.86 68.0 7.35e-01 98.1% 100.0%
4b8vA03 3.10.350.10 Alpha Beta › Roll › Membrane-bound Lytic Murein Transglycosylase D; Chain A › LysM domain 0.83 67.0 7.05e-01 100.0% 95.9%
4b8vA02 3.10.350.10 Alpha Beta › Roll › Membrane-bound Lytic Murein Transglycosylase D; Chain A › LysM domain 0.82 68.0 6.10e-01 100.0% 65.8%
2mtzA01 3.10.350.10 Alpha Beta › Roll › Membrane-bound Lytic Murein Transglycosylase D; Chain A › LysM domain 0.80 62.0 6.39e-01 100.0% 92.0%
2djpA00 3.10.350.10 Alpha Beta › Roll › Membrane-bound Lytic Murein Transglycosylase D; Chain A › LysM domain 0.78 62.0 5.50e-01 100.0% 61.0%
2gu1A01 3.10.450.350 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.70 62.0 5.19e-01 100.0% 59.1%
1sxjE02 1.10.8.60 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.65 46.0 4.37e-01 87.0% 64.1%
3gfoA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.64 52.0 3.48e-01 100.0% 28.7%
3sluB01 3.10.450.350 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.62 52.0 4.44e-01 100.0% 57.1%
2x51A06 3.30.70.1590 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.58 43.0 4.09e-01 81.5% 97.0%
1ryuA00 1.10.150.60 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › ARID DNA-binding domain 0.57 46.0 3.60e-01 90.7% 49.2%
1jhfA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 42.0 4.07e-01 92.6% 91.3%
6uglB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.55 43.0 4.22e-01 92.6% 81.0%
6v7xB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 42.0 4.24e-01 96.3% 89.3%
4iiwA01 3.30.1490.480 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › Endolytic murein transglycosylase 0.53 43.0 3.86e-01 92.6% 73.7%
4p55B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 41.0 3.54e-01 94.4% 97.9%
6k2cA02 3.30.2410.10 Alpha Beta › 2-Layer Sandwich › Hect, E3 ligase catalytic fold › Hect, E3 ligase catalytic domain 0.51 39.0 3.25e-01 90.7% 80.9%
5y2vC01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.51 43.0 3.76e-01 98.1% 70.6%
ECOD (54)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3641672 101.15.1.5 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM3_LYK4_5 0.96 80.0 6.99e-01 100.0% 62.7%
3320955 101.15.1.5 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM3_LYK4_5 0.93 77.0 7.16e-01 100.0% 72.3%
4157099 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.91 72.0 7.65e-01 98.1% 95.8%
1758716 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.90 74.0 7.55e-01 100.0% 90.4%
3670445 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.89 75.0 4.50e-01 100.0% 15.5%
5004560 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.88 76.0 7.64e-01 100.0% 90.9%
4137479 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.88 72.0 6.07e-01 100.0% 55.3%
3587382 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.88 76.0 7.58e-01 100.0% 90.9%
1759182 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.87 71.0 7.29e-01 100.0% 92.2%
4613383 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.87 76.0 6.31e-01 94.4% 61.1%
3973526 101.15.1.0 ↗ alpha arrays › HTH › LysM domain › LysM domain 0.87 80.0 6.49e-01 100.0% 62.1%
3248434 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.87 74.0 7.73e-01 100.0% 100.0%
4491522 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.86 68.0 6.63e-01 100.0% 78.3%
3970261 101.15.1.0 ↗ alpha arrays › HTH › LysM domain › LysM domain 0.85 73.0 7.40e-01 100.0% 94.4%
5058234 101.15.1.0 ↗ alpha arrays › HTH › LysM domain › LysM domain 0.85 76.0 7.40e-01 98.1% 100.0%
3355077 101.15.1.13 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM1_NFP_LYK 0.84 70.0 6.99e-01 100.0% 87.3%
3655928 101.15.1.13 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM1_NFP_LYK 0.83 72.0 5.74e-01 100.0% 50.0%
4069716 101.15.1.14 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM, LysM2_CERK1_LYK3_4_5 0.83 71.0 5.38e-01 100.0% 41.7%
2124918 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.83 71.0 5.17e-01 100.0% 36.8%
3417561 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.83 71.0 4.34e-01 100.0% 16.9%
3359799 101.15.1.10 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM2_NFP 0.83 71.0 5.20e-01 100.0% 37.6%
3666767 101.15.1.10 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM2_NFP 0.82 71.0 5.54e-01 100.0% 47.6%
3375189 101.15.1.10 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM2_NFP 0.82 70.0 6.40e-01 100.0% 71.4%
3651054 101.15.1.10 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM2_NFP 0.82 71.0 4.93e-01 100.0% 32.3%
3337328 101.15.1.14 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM, LysM2_CERK1_LYK3_4_5 0.82 72.0 4.45e-01 100.0% 18.3%
4176074 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.82 74.0 7.12e-01 100.0% 90.0%
3381619 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.81 71.0 4.33e-01 100.0% 17.4%
3656643 101.15.1.9 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM1_NFP_LYK, LysM2_CERK1_LYK3_4_5 0.81 71.0 5.17e-01 100.0% 37.8%
3636417 101.15.1.0 ↗ alpha arrays › HTH › LysM domain › LysM domain 0.81 70.0 7.09e-01 100.0% 94.3%
3691758 101.15.1.0 ↗ alpha arrays › HTH › LysM domain › LysM domain 0.81 69.0 6.90e-01 100.0% 89.1%
3305689 101.15.1.9 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM1_NFP_LYK, LysM2_CERK1_LYK3_4_5 0.81 71.0 5.08e-01 100.0% 36.4%
3989756 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.81 66.0 7.01e-01 96.3% 100.0%
None — 0.81 70.0 5.23e-01 100.0% 40.8%
2895417 101.15.1.0 ↗ alpha arrays › HTH › LysM domain › LysM domain 0.80 69.0 6.07e-01 100.0% 66.2%
3819870 101.15.1.6 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM2_CERK1_LYK3_4_5 0.80 70.0 5.06e-01 100.0% 37.8%
2809236 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.79 70.0 6.66e-01 100.0% 83.9%
3185732 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.79 71.0 7.10e-01 100.0% 96.4%
3299119 101.15.1.0 ↗ alpha arrays › HTH › LysM domain › LysM domain 0.78 69.0 5.21e-01 100.0% 42.4%
4093350 101.15.1.0 ↗ alpha arrays › HTH › LysM domain › LysM domain 0.75 66.0 6.27e-01 100.0% 84.6%
3181142 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.75 63.0 6.53e-01 94.4% 98.0%
4180515 101.15.1.0 ↗ alpha arrays › HTH › LysM domain › LysM domain 0.75 61.0 6.14e-01 100.0% 92.6%
3608297 101.15.1.0 ↗ alpha arrays › HTH › LysM domain › LysM domain 0.74 55.0 5.93e-01 83.3% 93.3%
3611431 101.15.1.0 ↗ alpha arrays › HTH › LysM domain › LysM domain 0.73 66.0 6.35e-01 100.0% 88.3%
3699957 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.73 53.0 5.28e-01 81.5% 74.5%
3716764 101.15.1.12 ↗ alpha arrays › HTH › LysM domain › LysM domain › PF30403 0.72 64.0 6.24e-01 100.0% 88.3%
3198 108.1.1.22 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand › IBP39 0.72 61.0 4.90e-01 94.4% 71.4%
3963519 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.71 64.0 6.00e-01 100.0% 89.2%
1649977 101.15.1.2 ↗ alpha arrays › HTH › LysM domain › LysM domain › OapA 0.70 62.0 5.15e-01 100.0% 57.8%
4595352 2004.1.1.17 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Myosin_head 0.61 47.0 2.64e-01 87.0% 87.0%
3968266 3536.1.1.0 ↗ a+b complex topology › Lmo1499 protein N-terminal domains › Lmo1499 protein N-terminal domains › Lmo1499 protein N-terminal domains 0.59 50.0 4.12e-01 100.0% 59.0%
3950673 3536.1.1.1 ↗ a+b complex topology › Lmo1499 protein N-terminal domains › Lmo1499 protein N-terminal domains › Lmo1499 protein N-terminal domains › YceG 0.57 47.0 4.40e-01 100.0% 75.7%
3285981 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.52 41.0 3.72e-01 96.3% 77.6%
3981463 3536.1.1.1 ↗ a+b complex topology › Lmo1499 protein N-terminal domains › Lmo1499 protein N-terminal domains › Lmo1499 protein N-terminal domains › YceG 0.51 41.0 3.54e-01 98.1% 66.0%
3896233 331.3.1.72 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like › FANCAA 0.51 36.0 3.05e-01 81.5% 91.8%